/// <summary>
/// Creates a Kohonen layer with the specified size and topology
/// </summary>
/// <param name="size">
/// Size of the layer
/// </param>
/// <param name="topology">
/// Lattice topology of neurons
/// </param>
/// <exception cref="ArgumentException">
/// If layer width or layer height is not positive, or if <c>topology</c> is invalid
/// </exception>
public KohonenLayer(Size size, LatticeTopology topology)
: this(size, new GaussianFunction(Math.Max(size.Width, size.Height) / 2), topology)
{
}
void Solve()
{
CrowNetP NetP = new CrowNetP();
if (netUP.netType == "som")
{
#region self organizing maps
#region prepare and assign
trainingSet.Clear();
int trainVectorDimension = 3;
if (trainDataArePoints)
{
for (int i = 0; i < pointsList.Count; i++)
{
trainingSet.Add(new TrainingSample(new double[] { pointsList[i].Value.X, pointsList[i].Value.Y, pointsList[i].Value.Z }));
}
}
else
{
trainVectorDimension = trainingVectorTree.Branches[0].Count;
trainingSet = new TrainingSet(trainVectorDimension);
for (int i = 0; i < trainingVectorTree.Branches.Count; i++)
{
double[] values = new double[trainVectorDimension];
for (int j = 0; j < trainVectorDimension; j++)
{
values[j] = trainingVectorTree.Branches[i][j].Value;
}
trainingSet.Add(new TrainingSample(values));
}
}
/// process
/// start learning
int learningRadius = Math.Max(layerWidth, layerHeight) / 2;
INeighborhoodFunction neighborhoodFunction = new GaussianFunction(learningRadius, netUP.neighborDistance) as INeighborhoodFunction;
if (neighborhood)
{
neighborhoodFunction = new MexicanHatFunction(learningRadius) as INeighborhoodFunction;
}
LatticeTopology topology = LatticeTopology.Rectangular;
if (latticeTopology)
{
topology = LatticeTopology.Hexagonal;
}
KohonenLayer inputLayer = new KohonenLayer(trainVectorDimension);
KohonenLayer outputLayer = new KohonenLayer(new Size(layerWidth, layerHeight), neighborhoodFunction, topology);
KohonenConnector connector = new KohonenConnector(inputLayer, outputLayer);
connector.Initializer = randomizer;
outputLayer.SetLearningRate(learningRate, 0.05d);
outputLayer.IsRowCircular = isCircularRows;
outputLayer.IsColumnCircular = isCircularColumns;
network = new KohonenNetwork(inputLayer, outputLayer);
network.useRandomTrainingOrder = opt.UseRandomTraining;
#endregion
#region delegates
network.BeginEpochEvent += new TrainingEpochEventHandler(
delegate(object senderNetwork, TrainingEpochEventArgs args)
{
#region TrainingCycle
if (network == null || !GO)
{
return;
}
int iPrev = layerWidth - 1;
allValuesTree = new GH_Structure <GH_Number>();
for (int i = 0; i < layerWidth; i++)
{
for (int j = 0; j < layerHeight; j++)
{
IList <ISynapse> synapses = (network.OutputLayer as KohonenLayer)[i, j].SourceSynapses;
double x = synapses[0].Weight;
double y = synapses[1].Weight;
double z = synapses[2].Weight;
for (int k = 0; k < trainVectorDimension; k++)
{
allValuesTree.Append(new GH_Number(synapses[k].Weight), new GH_Path(i, j));
}
rowX[j][i] = x;
rowY[j][i] = y;
rowZ[j][i] = z;
columnX[i][j] = x;
columnY[i][j] = y;
columnZ[i][j] = z;
if (j % 2 == 1)
{
hexagonalX[i][j] = x;
hexagonalY[i][j] = y;
hexagonalZ[i][j] = z;
}
else
{
hexagonalX[iPrev][j] = x;
hexagonalY[iPrev][j] = y;
hexagonalZ[iPrev][j] = z;
}
}
iPrev = i;
}
if (isCircularRows)
{
for (int i = 0; i < layerHeight; i++)
{
rowX[i][layerWidth] = rowX[i][0];
rowY[i][layerWidth] = rowY[i][0];
rowZ[i][layerWidth] = rowZ[i][0];
}
}
if (isCircularColumns)
{
for (int i = 0; i < layerWidth; i++)
{
columnX[i][layerHeight] = columnX[i][0];
columnY[i][layerHeight] = columnY[i][0];
columnZ[i][layerHeight] = columnZ[i][0];
hexagonalX[i][layerHeight] = hexagonalX[i][0];
hexagonalY[i][layerHeight] = hexagonalY[i][0];
hexagonalZ[i][layerHeight] = hexagonalZ[i][0];
}
}
Array.Clear(isWinner, 0, layerHeight * layerWidth);
#endregion
NetP = new CrowNetP("som", layerWidth, layerHeight, isCircularRows, isCircularColumns, latticeTopology, neighborhood, isWinner, rowX, rowY, rowZ, columnX, columnY, columnZ, hexagonalX, hexagonalY, hexagonalZ, allValuesTree);
counter++;
});
network.EndSampleEvent += new TrainingSampleEventHandler(
delegate(object senderNetwork, TrainingSampleEventArgs args)
{
isWinner[network.Winner.Coordinate.X, network.Winner.Coordinate.Y] = true;
});
#endregion
#endregion
}
network.Learn(trainingSet, cycles);
}