SBase clone()
{
IntPtr cPtr = libsbmlPINVOKE.ModifierSpeciesReference_clone(swigCPtr);
ModifierSpeciesReference ret = (cPtr == IntPtr.Zero) ? null : new ModifierSpeciesReference(cPtr, true);
return(ret);
}
internal static HandleRef getCPtrAndDisown(ModifierSpeciesReference obj)
{
HandleRef ptr = new HandleRef(null, IntPtr.Zero);
if (obj != null)
{
ptr = obj.swigCPtr;
obj.swigCMemOwn = false;
}
return(ptr);
}
public void test_ModifierSpeciesReference_createWithNS()
{
XMLNamespaces xmlns = new XMLNamespaces();
xmlns.add( "http://www.sbml.org", "testsbml");
SBMLNamespaces sbmlns = new SBMLNamespaces(2,1);
sbmlns.addNamespaces(xmlns);
SBase object1 = new ModifierSpeciesReference(sbmlns);
assertTrue( object1.getTypeCode() == libsbml.SBML_MODIFIER_SPECIES_REFERENCE );
assertTrue( object1.getMetaId() == "" );
assertTrue( object1.getNotes() == null );
assertTrue( object1.getAnnotation() == null );
assertTrue( object1.getLevel() == 2 );
assertTrue( object1.getVersion() == 1 );
assertTrue( object1.getNamespaces() != null );
XMLNamespaces n = object1.getNamespaces();
assertTrue( n.getLength() == 2 );
object1 = null;
}
internal static HandleRef getCPtr(ModifierSpeciesReference obj)
{
return((obj == null) ? new HandleRef(null, IntPtr.Zero) : obj.swigCPtr);
}
internal static HandleRef getCPtrAndDisown(ModifierSpeciesReference obj)
{
HandleRef ptr = new HandleRef(null, IntPtr.Zero);
if (obj != null)
{
ptr = obj.swigCPtr;
obj.swigCMemOwn = false;
}
return ptr;
}
internal static HandleRef getCPtr(ModifierSpeciesReference obj)
{
return (obj == null) ? new HandleRef(null, IntPtr.Zero) : obj.swigCPtr;
}
public void test_ModifierSpeciesReference_constructor()
{
SBase s;
try
{
s = new ModifierSpeciesReference(2,1);
s = new ModifierSpeciesReference(2,2);
s = new ModifierSpeciesReference(2,3);
s = new ModifierSpeciesReference(2,4);
s = new ModifierSpeciesReference(3,1);
s = new ModifierSpeciesReference(SN21);
s = new ModifierSpeciesReference(SN22);
s = new ModifierSpeciesReference(SN23);
s = new ModifierSpeciesReference(SN24);
s = new ModifierSpeciesReference(SN31);
}
catch (SBMLConstructorException e)
{
s = null;
}
assertTrue(s != null);
string msg = "";
try
{
s = new ModifierSpeciesReference(1,1);
}
catch (SBMLConstructorException e)
{
msg = e.Message;
}
assertTrue(msg == ErrMsg);
msg = "";
try
{
s = new ModifierSpeciesReference(1,2);
}
catch (SBMLConstructorException e)
{
msg = e.Message;
}
assertTrue(msg == ErrMsg);
msg = "";
try
{
s = new ModifierSpeciesReference(9,9);
}
catch (SBMLConstructorException e)
{
msg = e.Message;
}
assertTrue(msg == ErrMsg);
msg = "";
try
{
s = new ModifierSpeciesReference(SN11);
}
catch (SBMLConstructorException e)
{
msg = e.Message;
}
assertTrue(msg == ErrMsg);
msg = "";
try
{
s = new ModifierSpeciesReference(SN12);
}
catch (SBMLConstructorException e)
{
msg = e.Message;
}
assertTrue(msg == ErrMsg);
msg = "";
try
{
s = new ModifierSpeciesReference(SN99);
}
catch (SBMLConstructorException e)
{
msg = e.Message;
}
assertTrue(msg == ErrMsg);
}
public void test_ModifierSpeciesReference()
{
ModifierSpeciesReference msr = new ModifierSpeciesReference(2,4);
assertEquals( true, msr.hasRequiredElements() );
msr = null;
}
public void test_SpeciesReference_Modifier_parent_add()
{
ModifierSpeciesReference sr = new ModifierSpeciesReference(2,4);
sr.setSpecies("s");
Reaction r = new Reaction(2,4);
r.addModifier(sr);
sr = null;
ListOf lo = r.getListOfModifiers();
assertTrue( lo == r.getModifier(0).getParentSBMLObject() );
assertTrue( r == lo.getParentSBMLObject() );
}
public void test_SpeciesReference_Modifier_ancestor_add()
{
ModifierSpeciesReference sr = new ModifierSpeciesReference(2,4);
sr.setSpecies("s");
Reaction r = new Reaction(2,4);
r.addModifier(sr);
sr = null;
ListOf lo = r.getListOfModifiers();
ModifierSpeciesReference obj = r.getModifier(0);
assertTrue( obj.getAncestorOfType(libsbml.SBML_REACTION) == r );
assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lo );
assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( obj.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null );
}
/**
* Adds a given ModifierSpeciesReference object as a product in this
* Reaction.
*
* The ModifierSpeciesReference instance in @p msr is copied.
*
* @param msr a ModifierSpeciesReference object referring to a Species in
* the enclosing Model
*
* @return integer value indicating success/failure of the
* function. @if clike The value is drawn from the
* enumeration #OperationReturnValues_t. @endif The possible values
* returned by this function are:
* @li @link libsbmlcs.libsbml.LIBSBML_OPERATION_SUCCESS LIBSBML_OPERATION_SUCCESS @endlink
* @li @link libsbmlcs.libsbml.LIBSBML_UNEXPECTED_ATTRIBUTE LIBSBML_UNEXPECTED_ATTRIBUTE @endlink
* @li @link libsbmlcs.libsbml.LIBSBML_LEVEL_MISMATCH LIBSBML_LEVEL_MISMATCH @endlink
* @li @link libsbmlcs.libsbml.LIBSBML_DUPLICATE_OBJECT_ID LIBSBML_DUPLICATE_OBJECT_ID @endlink
* @li @link libsbmlcs.libsbml.LIBSBML_VERSION_MISMATCH LIBSBML_VERSION_MISMATCH @endlink
* @li @link libsbmlcs.libsbml.LIBSBML_OPERATION_FAILED LIBSBML_OPERATION_FAILED @endlink
*
* *
* @note This method should be used with some caution. The fact that this
* method @em copies the object passed to it means that the caller will be
* left holding a physically different object instance than the one contained
* inside this object. Changes made to the original object instance (such as
* resetting attribute values) will <em>not affect the instance in this
* object</em>. In addition, the caller should make sure to free the
* original object if it is no longer being used, or else a memory leak will
* result. Please see other methods on this class (particularly a
* corresponding method whose name begins with the word <code>create</code>)
* for alternatives that do not lead to these issues.
*
*
*
* @see createModifier()
*/
public int addModifier(ModifierSpeciesReference msr)
{
int ret = libsbmlPINVOKE.Reaction_addModifier(swigCPtr, ModifierSpeciesReference.getCPtr(msr));
return ret;
}
public void test_ModifierSpeciesReference()
{
ModifierSpeciesReference msr = new ModifierSpeciesReference(2,4);
assertEquals( false, (msr.hasRequiredAttributes()) );
msr.setSpecies("msr");
assertEquals( true, msr.hasRequiredAttributes() );
msr = null;
}