private static GeneralCluster ReturnClusterAndPartition(LightWeightGraph healthy,
LightWeightGraph infected, int healthyClusters, int infectedClusters, String healthyfile,
String infectedfile)
{
String workingDir = Directory.GetCurrentDirectory();
GeneralCluster cluster = new GeneralCluster();
cluster.Int0.Cluster =
new HIntegrityClust(healthy, healthyClusters + 1, false, 1, 0, false, false);
cluster.Int0.Partition = cluster.Int0.Cluster.GetPartition();
cluster.Int0.Partition.SavePartition($"{workingDir}/Data/{healthyfile}_INT.cluster", $"{workingDir}/{healthyfile}.graph");
cluster.Int1.Cluster =
new HIntegrityClust(infected, infectedClusters + 1, false, 1, 0, false, false);
cluster.Int1.Partition = cluster.Int1.Cluster.GetPartition();
cluster.Int1.Partition.SavePartition($"{workingDir}/Data/{infectedfile}_INT.cluster", $"{workingDir}/{infectedfile}.graph");
cluster.HealthyIntCount = new int[cluster.Int0.Partition.DataCount];
cluster.InfectedIntCount = new int[cluster.Int1.Partition.DataCount];
cluster.Ten0.Cluster =
new HTenacityClust(healthy, healthyClusters + 1, false, 1, 0, false, false);
cluster.Ten0.Partition = cluster.Ten0.Cluster.GetPartition();
cluster.Ten0.Partition.SavePartition($"{workingDir}/Data/{healthyfile}_TEN.cluster", $"{workingDir}/{healthyfile}.graph");
cluster.Ten1.Cluster =
new HTenacityClust(infected, infectedClusters + 1, false, 1, 0, false, false);
cluster.Ten1.Partition = cluster.Ten1.Cluster.GetPartition();
cluster.Ten1.Partition.SavePartition($"{workingDir}/Data/{infectedfile}_TEN.cluster", $"{workingDir}/{infectedfile}.graph");
cluster.HealthyTenCount = new int[cluster.Ten0.Partition.DataCount];
cluster.InfectedTenCount = new int[cluster.Ten1.Partition.DataCount];
cluster.Vat0.Cluster = new HVATClust(healthy, healthyClusters + 1, false, 1, 0, false, false);
cluster.Vat0.Partition = cluster.Vat0.Cluster.GetPartition();
cluster.Vat0.Partition.SavePartition($"{workingDir}/Data/{infectedfile}_VAT.cluster", $"{workingDir}/{infectedfile}.graph");
cluster.Vat1.Cluster =
new HVATClust(infected, infectedClusters + 1, false, 1, 0, false, false);
cluster.Vat1.Partition = cluster.Vat1.Cluster.GetPartition();
cluster.Vat1.Partition.SavePartition($"{workingDir}/Data/{infectedfile}_VAT.cluster", $"{workingDir}/{infectedfile}.graph");
cluster.HealthyVatCount = new int[cluster.Vat0.Partition.DataCount];
cluster.InfectedVatCount = new int[cluster.Vat1.Partition.DataCount];
return(cluster);
}
private static List <DataOutStruct> ConstructList(string args, LightWeightGraph healthy,
LightWeightGraph infected, String healthyfile, String infectedfile, int healthyClusters,
int infectedClusters)
{
List <List <DataOutStruct> > outList = new List <List <DataOutStruct> >();
List <DataOutStruct> dataOut = new List <DataOutStruct>();
if (Enum.TryParse <ClusterType>(args, ignoreCase: true, result: out var userOut))
{
GeneralCluster cluster = ReturnClusterAndPartition(healthy, infected, healthyClusters, infectedClusters,
healthyfile, infectedfile);
List <DataOutStruct> d1;
List <DataOutStruct> d2;
List <DataOutStruct> d3;
switch (userOut)
{
case ClusterType.G1I:
dataOut = G1(GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition,
cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile, infectedfile, OutType.Int,
outList));
break;
case ClusterType.G1T:
dataOut = G1(GroupInitializer(cluster.Ten0.Partition, cluster.Ten1.Partition,
cluster.HealthyTenCount, cluster.InfectedTenCount, healthyfile, infectedfile, OutType.Ten,
outList));
break;
case ClusterType.G1V:
dataOut = G1(GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition,
cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile, infectedfile, OutType.Vat,
outList));
break;
case ClusterType.G2I:
dataOut = G2(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition, cluster.HealthyIntCount,
cluster.InfectedIntCount, healthyfile, infectedfile, OutType.Int, outList),
cluster.Int0.Partition, cluster.Int1.Partition, OutType.Int);
break;
case ClusterType.G2T:
dataOut = G2(
GroupInitializer(cluster.Ten0.Partition, cluster.Ten1.Partition, cluster.HealthyTenCount,
cluster.InfectedTenCount, healthyfile, infectedfile, OutType.Ten, outList),
cluster.Ten0.Partition, cluster.Ten1.Partition, OutType.Ten);
break;
case ClusterType.G2V:
dataOut = G2(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition, cluster.HealthyVatCount,
cluster.InfectedVatCount, healthyfile, infectedfile, OutType.Vat, outList),
cluster.Vat0.Partition, cluster.Vat1.Partition, OutType.Vat);
break;
case ClusterType.G3I:
dataOut = G3(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition, cluster.HealthyIntCount,
cluster.InfectedIntCount, healthyfile, infectedfile, OutType.Int, outList),
cluster.Int0.Partition, cluster.Int1.Partition, OutType.Int);
break;
case ClusterType.G3T:
dataOut = G3(
GroupInitializer(cluster.Ten0.Partition, cluster.Ten1.Partition, cluster.HealthyTenCount,
cluster.InfectedTenCount, healthyfile, infectedfile, OutType.Ten, outList),
cluster.Ten0.Partition, cluster.Ten1.Partition, OutType.Ten);
break;
case ClusterType.G3V:
dataOut = G3(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition,
cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile, infectedfile,
OutType.Vat, outList), cluster.Vat0.Partition, cluster.Vat1.Partition, OutType.Vat);
break;
case ClusterType.G4I:
dataOut = G4(GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition,
cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile, infectedfile, OutType.Int,
outList));
break;
case ClusterType.G4T:
dataOut = G4(GroupInitializer(cluster.Ten0.Partition, cluster.Ten1.Partition,
cluster.HealthyTenCount, cluster.InfectedTenCount, healthyfile, infectedfile, OutType.Ten,
outList));
break;
case ClusterType.G4V:
dataOut = G4(GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition,
cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile, infectedfile, OutType.Vat,
outList));
break;
/////////////////////////////////////////////////////////////////////////////////////////////////////////////////
// start of G13 - G25 //
/////////////////////////////////////////////////////////////////////////////////////////////////////////////////
case ClusterType.G13:
d1 = G1(GroupInitializer(cluster.Vat0.Partition,
cluster.Vat1.Partition, cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile,
infectedfile, OutType.Vat, outList));
d2 = G2(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition, cluster.HealthyIntCount,
cluster.InfectedIntCount, healthyfile, infectedfile, OutType.Int, outList),
cluster.Int0.Partition, cluster.Int1.Partition, OutType.Int);
d3 = G2(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition, cluster.HealthyVatCount,
cluster.InfectedVatCount, healthyfile, infectedfile, OutType.Vat, outList),
cluster.Vat0.Partition, cluster.Vat1.Partition, OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G14:
d1 = G1(GroupInitializer(cluster.Vat0.Partition,
cluster.Vat1.Partition, cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile,
infectedfile, OutType.Vat, outList));
d2 = G2(
GroupInitializer(cluster.Ten0.Partition, cluster.Ten1.Partition, cluster.HealthyTenCount,
cluster.InfectedTenCount, healthyfile, infectedfile, OutType.Ten, outList),
cluster.Ten0.Partition, cluster.Ten1.Partition, OutType.Ten);
d3 = G2(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition, cluster.HealthyIntCount,
cluster.InfectedIntCount, healthyfile, infectedfile, OutType.Int, outList),
cluster.Int0.Partition, cluster.Int1.Partition, OutType.Int);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G15:
d1 = G1(GroupInitializer(cluster.Ten0.Partition,
cluster.Ten0.Partition, cluster.HealthyTenCount, cluster.InfectedTenCount, healthyfile,
infectedfile, OutType.Ten, outList));
d2 = G2(
GroupInitializer(cluster.Ten0.Partition, cluster.Ten1.Partition, cluster.HealthyTenCount,
cluster.InfectedTenCount, healthyfile, infectedfile, OutType.Ten, outList),
cluster.Ten0.Partition, cluster.Ten1.Partition, OutType.Ten);
d3 = G2(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition, cluster.HealthyIntCount,
cluster.InfectedIntCount, healthyfile, infectedfile, OutType.Int, outList),
cluster.Int0.Partition, cluster.Int1.Partition, OutType.Int);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G16:
d1 = G1(GroupInitializer(cluster.Int0.Partition,
cluster.Int0.Partition, cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile,
infectedfile, OutType.Int, outList));
d2 = G2(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition, cluster.HealthyIntCount,
cluster.InfectedIntCount, healthyfile, infectedfile, OutType.Int, outList),
cluster.Int0.Partition, cluster.Int1.Partition, OutType.Int);
d3 = G2(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition, cluster.HealthyVatCount,
cluster.InfectedVatCount, healthyfile, infectedfile, OutType.Vat, outList),
cluster.Vat0.Partition, cluster.Vat1.Partition, OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G17:
d1 = G1(GroupInitializer(cluster.Vat0.Partition,
cluster.Vat1.Partition, cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile,
infectedfile, OutType.Vat, outList));
d2 = G3(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition,
cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile, infectedfile,
OutType.Int, outList), cluster.Int0.Partition, cluster.Int1.Partition,
OutType.Int);
d3 = G3(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition,
cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile, infectedfile,
OutType.Vat, outList), cluster.Vat0.Partition, cluster.Vat1.Partition,
OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G18:
d1 = G1(GroupInitializer(cluster.Int0.Partition,
cluster.Int1.Partition, cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile,
infectedfile, OutType.Int, outList));
d2 = G3(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition,
cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile, infectedfile,
OutType.Int, outList), cluster.Int0.Partition, cluster.Int1.Partition,
OutType.Int);
d3 = G3(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition,
cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile, infectedfile,
OutType.Vat, outList), cluster.Vat0.Partition, cluster.Vat1.Partition,
OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G19:
d1 = G1(GroupInitializer(cluster.Ten0.Partition,
cluster.Ten1.Partition, cluster.HealthyTenCount, cluster.InfectedTenCount, healthyfile,
infectedfile, OutType.Ten, outList));
d2 = G3(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition,
cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile, infectedfile,
OutType.Int, outList), cluster.Int0.Partition, cluster.Int1.Partition,
OutType.Int);
d3 = G3(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition,
cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile, infectedfile,
OutType.Vat, outList), cluster.Vat0.Partition, cluster.Vat1.Partition,
OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G20:
d1 = G1(GroupInitializer(cluster.Ten0.Partition,
cluster.Ten1.Partition, cluster.HealthyTenCount, cluster.InfectedTenCount, healthyfile,
infectedfile, OutType.Ten, outList));
d2 = G3(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition,
cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile, infectedfile,
OutType.Int, outList), cluster.Int0.Partition, cluster.Int1.Partition,
OutType.Int);
d3 = G3(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition,
cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile, infectedfile,
OutType.Vat, outList), cluster.Vat0.Partition, cluster.Vat1.Partition,
OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G21:
d1 = G4(GroupInitializer(cluster.Vat0.Partition,
cluster.Vat1.Partition, cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile,
infectedfile, OutType.Vat, outList));
d2 = G3(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition,
cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile, infectedfile,
OutType.Int, outList), cluster.Int0.Partition, cluster.Int1.Partition,
OutType.Int);
d3 = G3(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition,
cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile, infectedfile,
OutType.Vat, outList), cluster.Vat0.Partition, cluster.Vat1.Partition,
OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G22:
d1 = G4(GroupInitializer(cluster.Int0.Partition,
cluster.Int1.Partition, cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile,
infectedfile, OutType.Int, outList));
d2 = G3(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition,
cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile, infectedfile,
OutType.Int, outList), cluster.Int0.Partition, cluster.Int1.Partition,
OutType.Int);
d3 = G3(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition,
cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile, infectedfile,
OutType.Vat, outList), cluster.Vat0.Partition, cluster.Vat1.Partition,
OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G23:
d1 = G4(GroupInitializer(cluster.Ten0.Partition,
cluster.Ten1.Partition, cluster.HealthyTenCount, cluster.InfectedTenCount, healthyfile,
infectedfile, OutType.Ten, outList));
d2 = G3(
GroupInitializer(cluster.Int0.Partition, cluster.Int1.Partition,
cluster.HealthyIntCount, cluster.InfectedIntCount, healthyfile, infectedfile,
OutType.Int, outList), cluster.Int0.Partition, cluster.Int1.Partition,
OutType.Int);
d3 = G3(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition,
cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile, infectedfile,
OutType.Vat, outList), cluster.Vat0.Partition, cluster.Vat1.Partition,
OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G24:
d1 = G4(GroupInitializer(cluster.Ten0.Partition,
cluster.Ten1.Partition, cluster.HealthyTenCount, cluster.InfectedTenCount, healthyfile,
infectedfile, OutType.Ten, outList));
d2 = G3(
GroupInitializer(cluster.Ten0.Partition, cluster.Ten1.Partition,
cluster.HealthyTenCount, cluster.InfectedTenCount, healthyfile, infectedfile,
OutType.Ten, outList), cluster.Ten0.Partition, cluster.Ten1.Partition,
OutType.Ten);
d3 = G3(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition, cluster.HealthyVatCount,
cluster.InfectedVatCount, healthyfile, infectedfile, OutType.Vat, outList),
cluster.Vat0.Partition, cluster.Vat1.Partition, OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
case ClusterType.G25:
d1 = G4(GroupInitializer(cluster.Vat0.Partition,
cluster.Vat1.Partition, cluster.HealthyVatCount, cluster.InfectedVatCount, healthyfile,
infectedfile, OutType.Vat, outList));
d2 = G3(
GroupInitializer(cluster.Ten0.Partition, cluster.Ten1.Partition, cluster.HealthyTenCount,
cluster.InfectedTenCount, healthyfile, infectedfile, OutType.Ten, outList),
cluster.Ten0.Partition, cluster.Ten1.Partition, OutType.Ten);
d3 = G3(
GroupInitializer(cluster.Vat0.Partition, cluster.Vat1.Partition, cluster.HealthyVatCount,
cluster.InfectedVatCount, healthyfile, infectedfile, OutType.Vat, outList),
cluster.Vat0.Partition, cluster.Vat1.Partition, OutType.Vat);
dataOut = d1.Union(d2).Where(x => !d3.Contains(x)).OrderBy(x => x.Bacteria).Distinct().ToList();
break;
}
}
return(dataOut);
}
