public override List<Bundle> ParseConfigs()
        {
            var bundles = new List<Bundle>();
            if (!Directory.Exists(ProjectPath))
            {
                throw new DirectoryNotFoundException("Could not find project directory.");
            }

            FindConfigs();

            var loader = new ConfigLoader(
                FilePaths,
                new ExceptionThrowingLogger(),
                new ConfigLoaderOptions { ProcessBundles = true });

            Configuration = loader.Get();
            
            foreach (var bundle in Configuration.AutoBundles.Bundles)
            {
                var files = new List<string>();
                var bundleResult = new Bundle
                                       {
                                           Files = new List<FileSpec>(),
                                           Output = this.GetOutputPath(bundle.OutputPath, bundle.Id),
                                           ContainingConfig = bundle.ContainingConfig,
                                           BundleId = bundle.Id
                                       };
                bundles.Add(bundleResult);

                var tempFileList = new List<RequireFile>();

                foreach (var include in bundle.Includes)
                {
                    // check if the file path is actually an URL
                    if (!string.IsNullOrEmpty(include.File) && !include.File.Contains("?"))
                    {
                        files.Add(this.ResolvePhysicalPath(include.File));
                    }
                    else if(!string.IsNullOrEmpty(include.Directory))
                    {
                        var absDirectory = this.GetAbsoluteDirectory(include.Directory);

                        // not using filter for this since we're going to use the one the user provided in the future
                        var dirFiles = Directory.GetFiles(absDirectory, "*", SearchOption.AllDirectories).Where(r => Path.GetExtension(r) == ".js").ToList();
                        files.AddRange(dirFiles);
                    }
                }

                files = files.Distinct().ToList();

                var fileQueue = new Queue<string>();
                this.EnqueueFileList(tempFileList, fileQueue, files);
                

                while (fileQueue.Any())
                {
                    var file = fileQueue.Dequeue();
                    var fileText = File.ReadAllText(file, encoding);
                    var relativePath = PathHelpers.GetRelativePath(file, EntryPoint + Path.DirectorySeparatorChar);
                    var processor = new ScriptProcessor(relativePath, fileText, Configuration);
                    processor.Process();
                    var result = processor.ProcessedString;
                    var dependencies = processor.Dependencies.Select(r => this.ResolvePhysicalPath(r)).Where(r => r != null).Distinct().ToList();
                    tempFileList.Add(new RequireFile
                                         {
                                             Name = file,
                                             Content = result,
                                             Dependencies = dependencies
                                         });

                    this.EnqueueFileList(tempFileList, fileQueue, dependencies);
                }

                while (tempFileList.Any())
                {
                    var addedFiles = bundleResult.Files.Select(r => r.FileName).ToList();
                    var noDeps = tempFileList.Where(r => !r.Dependencies.Any()
                                                        || r.Dependencies.All(x => addedFiles.Contains(x))).ToList();
                    if (!noDeps.Any())
                    {
                        noDeps = tempFileList.ToList();
                    }

                    foreach (var requireFile in noDeps)
                    {
                        bundleResult.Files.Add(new FileSpec(requireFile.Name, string.Empty) { FileContent = requireFile.Content });
                        tempFileList.Remove(requireFile);
                    }    
                }
            }

            this.WriteOverrideConfigs(bundles);

            return bundles;
        }
        private RequireFile enumerateDependenciesOf(string scriptFile)
        {
            var scriptText = File.ReadAllText(scriptFile, encoding);
            var relativePath = PathHelpers.GetRelativePath(scriptFile, EntryPoint);

            var processor = new ScriptProcessor(relativePath, scriptText, Configuration);
            processor.Process();

            var baseUrl = Path.Combine(ProjectPath, "Scripts");
            var dependencies = processor.Dependencies
                .Select(r => this.ResolvePhysicalPath(r, baseUrl))
                .Where(r => r != null)
                .Distinct()
                .ToList();

            return new RequireFile
            {
                Name = scriptFile,
                Content = processor.ProcessedString,
                Dependencies = dependencies
            };
        }