public void TestFilter2() { var spectrum = new IdentifiedSpectrum(); spectrum.Query.FileScan.LongFileName = "ABDCDD.12.123.2.dat"; var pro1 = new IdentifiedProtein("P1"); pro1.Peptides.Add(new IdentifiedPeptide(spectrum) { Sequence = "AAAAAAA" }); var pro2 = new IdentifiedProtein("P2"); pro2.Peptides.Add(new IdentifiedPeptide(spectrum) { Sequence = "BBBBBBB" }); var g1 = new IdentifiedProteinGroup(); g1.Add(pro1); g1.Add(pro2); IdentifiedResult ir = new IdentifiedResult(); ir.Add(g1); Assert.AreEqual(1, ir.Count); Assert.AreEqual(2, ir[0].Count); Assert.AreEqual(1, ir.GetSpectra().Count); ir.Filter(m => { return(m.Sequence.Contains('A')); }); Assert.AreEqual(1, ir.Count); Assert.AreEqual(1, ir[0].Count); Assert.AreEqual(1, ir.GetSpectra().Count); Assert.AreSame(pro1, ir[0][0]); ir.Filter(m => { return(m.Sequence.Contains('C')); }); Assert.AreEqual(0, ir.Count); }
public void TestFilter() { var pro1 = new IdentifiedProtein("P1"); pro1.Peptides.Add(new IdentifiedPeptide(new IdentifiedSpectrum() { Charge = 1 })); pro1.Peptides.Add(new IdentifiedPeptide(new IdentifiedSpectrum() { Charge = 2 })); var pro2 = new IdentifiedProtein("P2"); pro2.Peptides.Add(new IdentifiedPeptide(new IdentifiedSpectrum() { Charge = 3 })); var g1 = new IdentifiedProteinGroup(); g1.Add(pro1); var g2 = new IdentifiedProteinGroup(); g2.Add(pro2); IdentifiedResult ir = new IdentifiedResult(); ir.Add(g1); ir.Add(g2); Assert.AreEqual(2, ir.Count); Assert.AreEqual(3, ir.GetSpectra().Count); ir.Filter(m => { return(m.Spectrum.Query.Charge > 1); }); Assert.AreEqual(2, ir.Count); Assert.AreEqual(2, ir.GetSpectra().Count); ir.GetSpectra().All(m => { return(m.Charge > 1); }); ir.Filter(m => { return(m.Spectrum.Query.Charge > 2); }); Assert.AreEqual(1, ir.Count); Assert.AreEqual(1, ir.GetSpectra().Count); ir.GetSpectra().All(m => { return(m.Charge > 2); }); Assert.AreEqual("P2", ir[0][0].Name); }