/// <summary>
/// Constructor
/// </summary>
/// <param name="name">Unique identifier for the model</param>
/// <param name="model">The data context</param>
/// <param name="isAddition">Indicates whether its an addition or removal</param>
public ActivityEventArgs
(string name, ActivityModel model, bool isAddition)
{
this.Identifier = name;
this.DataModel = model;
this.IsAddition = isAddition;
}
public void Setup()
{
StartNode = CreateActivityModel("StartNode_0","StartNode", true);
Node_GenbankParser = CreateActivityModel("GenbankParser_1", "MBF.Workflow.GenBankParserActivity", false);
Node_BioPatMLParser = CreateActivityModel("BioPatMLParser_2", "BioPatMLActivities.BioPatMLParser", false);
Node_BioPatSeeker = CreateActivityModel("BioPatSeeker_3", "BioPatMLActivities.BioPatSeeker", false);
Node_HitsViewer = CreateActivityModel("HitsViewer_4", "BioPatMLActivities.HitsViewer", false);
}
public void CleanUp()
{
Node_GenbankParser = null;
Node_BioPatMLParser = null;
Node_BioPatSeeker = null;
Node_HitsViewer = null;
StartNode = null;
}
public void Setup()
{
StartNode = CreateActivityModel("StartNode", true);
Node1 = CreateActivityModel("MBF.Workflow.FastaParserActivity", false);
Node2 = CreateActivityModel("Microsoft.Research.ScientificWorkflow.Activities.WriteToConsole", false);
Node3 = CreateActivityModel("Microsoft.Research.ScientificWorkflow.Activities.FileWriter", false);
Node4 = CreateActivityModel("Microsoft.Research.ScientificWorkflow.Activities.DataProductReaderActivity", false);
Node5 = CreateActivityModel("MBF.Workflow.DnaTranscriptionActivity", false);
}
public void AddActivities(String identifier, ActivityModel activity)
{
#region Validation
if ((identifier == null))
throw new ArgumentNullException
("The activity identifier (unique name) cannot be null.");
else if (activity == null)
throw new ArgumentNullException
("Workflow Manager could not add null activity.");
#endregion
StandardFlowModel activityTray =
activity.ActivityClassification == ActivityModel.ActivityType.ForLoop
? new ForLoopFlowModel(activity) : new StandardFlowModel(activity);
this.activityDict.Add(identifier, activityTray);
}
public void CleanUp()
{
Node1 = null; Node2 = null; Node3 = null; Node4 = null; Node5 = null;
StartNode = null;
}
/// <summary>
/// IDisposable interface
/// </summary>
public void Dispose()
{
activity = null;
children = null;
}
public StandardFlowModel(ActivityModel activity)
: this()
{
this.activity = activity;
}
public void TestAddActivityLinks()
{
WorkflowManager workflowMang = new WorkflowManager();
Guid MyGuidId = new Guid();
Guid MyGuidId2 = new Guid();
MyGuidId = Guid.NewGuid();
MyGuidId2 = Guid.NewGuid();
ActivityModel dummyModel1 = new ActivityModel()
{
ActivityClass = "DummyNode",
Description = "For testing",
DisplayLabel = "noLabel",
Id = MyGuidId
};
ActivityModel dummyModel2 = new ActivityModel()
{
ActivityClass = "DummyNode2",
Description = "For testing2",
DisplayLabel = "noLabel2",
Id = MyGuidId2
};
workflowMang.AddActivities("dummyActivity_1", dummyModel1);
workflowMang.AddActivities("dummyActivity_2", dummyModel2);
workflowMang.AddActivityLink("dummyActivity_1", "dummyActivity_2");
StandardFlowModel source = workflowMang.activityDict["dummyActivity_1"];
StandardFlowModel target = workflowMang.activityDict["dummyActivity_2"];
Assert.AreEqual(source.Children.Count, 1);
Assert.AreEqual(source.Children[0], target);
}
public void TestGetWorkflowXML()
{
//A complex test scenario
//here we build a workflow that has
//A Start Node connected to a sequential activity
//Then branches out to triplet activities
//And ends with an ending node
WorkflowManager workflowMang = new WorkflowManager();
Guid MyGuidId = new Guid();
MyGuidId = Guid.NewGuid();
ActivityModel StartNode = new ActivityModel()
{
ActivityClass = "StartNode",
Id = MyGuidId,
IsStartFlow = true
};
Guid MyGuidId2 = new Guid();
MyGuidId2 = Guid.NewGuid();
ActivityModel SequentialNode1 = new ActivityModel()
{
ActivityClass = "sequentialNode1",
Id = MyGuidId2
};
Guid MyGuidId3 = new Guid();
MyGuidId3 = Guid.NewGuid();
ActivityModel TripletNode1 = new ActivityModel()
{
ActivityClass = "tripletNode1",
Id = MyGuidId3
};
Guid MyGuidId4 = new Guid();
MyGuidId4 = Guid.NewGuid();
ActivityModel TripletNode2 = new ActivityModel()
{
ActivityClass = "tripletNode2",
Id = MyGuidId4
};
Guid MyGuidId5 = new Guid();
MyGuidId5 = Guid.NewGuid();
ActivityModel TripletNode3 = new ActivityModel()
{
ActivityClass = "tripletNode3",
Id = MyGuidId5
};
Guid MyGuidId6 = new Guid();
MyGuidId6 = Guid.NewGuid();
ActivityModel OutputWindow = new ActivityModel()
{
ActivityClass = "outputWindow",
Id = MyGuidId6
};
workflowMang.AddActivities("start_1", StartNode);
workflowMang.AddActivities("sequential_2", SequentialNode1);
workflowMang.AddActivities("triplet_3", TripletNode1);
workflowMang.AddActivities("triplet_4", TripletNode2);
workflowMang.AddActivities("triplet_5", TripletNode3);
workflowMang.AddActivities("outputWind_6", OutputWindow);
workflowMang.AddActivityLink("start_1", "sequential_2");
workflowMang.AddActivityLink("sequential_2", "triplet_3");
workflowMang.AddActivityLink("sequential_2", "triplet_4");
workflowMang.AddActivityLink("sequential_2", "triplet_5");
workflowMang.AddActivityLink("triplet_3", "outputWind_6");
//XmlReader reader = XmlReader.Create(new System.IO.Stream(workflowMang.GetWorkflowXML()));
System.Diagnostics.Debug.WriteLine("====================================");
//System.Diagnostics.Debug.WriteLine(workflowMang.GetWorkflowXML());
}