/// <summary>
/// Constructor
/// </summary>
/// <param name="originalSpec"></param>
/// <param name="peaks"></param>
public DeconvolutedSpectrum(Spectrum originalSpec, DeconvolutedPeak[] peaks)
: base(originalSpec.ScanNum)
{
MsLevel = originalSpec.MsLevel;
NativeId = originalSpec.NativeId;
ElutionTime = originalSpec.ElutionTime;
TotalIonCurrent = originalSpec.TotalIonCurrent;
var ms2Spec = originalSpec as ProductSpectrum;
if (ms2Spec == null)
{
ActivationMethod = ActivationMethod.Unknown;
}
else
{
ActivationMethod = ms2Spec.ActivationMethod;
IsolationWindow = new IsolationWindow(ms2Spec.IsolationWindow.IsolationWindowTargetMz, ms2Spec.IsolationWindow.IsolationWindowLowerOffset, ms2Spec.IsolationWindow.IsolationWindowUpperOffset, ms2Spec.IsolationWindow.MonoisotopicMz, ms2Spec.IsolationWindow.Charge);
}
var dPeaks = new DeconvolutedPeak[peaks.Length];
peaks.CopyTo(dPeaks, 0);
Peaks = dPeaks;
}
/// <summary>
/// Constructor
/// </summary>
/// <param name="originalSpec"></param>
/// <param name="peaks"></param>
public DeconvolutedSpectrum(Spectrum originalSpec, IReadOnlyList <DeconvolutedPeak> peaks)
: base(originalSpec.ScanNum)
{
MsLevel = originalSpec.MsLevel;
NativeId = originalSpec.NativeId;
ElutionTime = originalSpec.ElutionTime;
TotalIonCurrent = originalSpec.TotalIonCurrent;
if (originalSpec is ProductSpectrum ms2Spec)
{
ActivationMethod = ms2Spec.ActivationMethod;
IsolationWindow = new IsolationWindow(ms2Spec.IsolationWindow.IsolationWindowTargetMz,
ms2Spec.IsolationWindow.IsolationWindowLowerOffset,
ms2Spec.IsolationWindow.IsolationWindowUpperOffset, ms2Spec.IsolationWindow.MonoisotopicMz,
ms2Spec.IsolationWindow.Charge);
}
else
{
ActivationMethod = ActivationMethod.Unknown;
}
StorePeaks(peaks);
}