示例#1
0
        public static HessMatrix GetMulImpl(ILinAlg ila, bool warning, params HessMatrix[] mats)
        {
            if (ila != null)
            {
                if (HDebug.Selftest())
                {
                    Matrix h0 = new double[, ] {
                        { 0, 1, 2, 3, 4, 5 }
                        , { 1, 2, 3, 4, 5, 6 }
                        , { 2, 3, 4, 5, 6, 7 }
                        , { 3, 4, 5, 6, 7, 8 }
                        , { 4, 5, 6, 7, 8, 9 }
                        , { 5, 6, 7, 8, 9, 0 }
                    };
                    HessMatrix h1 = HessMatrixDense.FromMatrix(h0);
                    HessMatrix h2 = HessMatrixSparse.FromMatrix(h0);
                    Matrix     t0 = Matrix.GetMul(Matrix.GetMul(h1, h1), h1);
                    {
                        Matrix t1 = GetMulImpl(ila, false, h1, h1, h1); double d1 = (t0 - t1).HAbsMax(); HDebug.Assert(0 == d1);
                        Matrix t2 = GetMulImpl(ila, false, h1, h1, h2); double d2 = (t0 - t2).HAbsMax(); HDebug.Assert(0 == d2);
                        Matrix t3 = GetMulImpl(ila, false, h1, h2, h1); double d3 = (t0 - t3).HAbsMax(); HDebug.Assert(0 == d3);
                        Matrix t4 = GetMulImpl(ila, false, h1, h2, h2); double d4 = (t0 - t4).HAbsMax(); HDebug.Assert(0 == d4);
                        Matrix t5 = GetMulImpl(ila, false, h2, h1, h1); double d5 = (t0 - t5).HAbsMax(); HDebug.Assert(0 == d5);
                        Matrix t6 = GetMulImpl(ila, false, h2, h1, h2); double d6 = (t0 - t6).HAbsMax(); HDebug.Assert(0 == d6);
                        Matrix t7 = GetMulImpl(ila, false, h2, h2, h1); double d7 = (t0 - t7).HAbsMax(); HDebug.Assert(0 == d7);
                        Matrix t8 = GetMulImpl(ila, false, h2, h2, h2); double d8 = (t0 - t8).HAbsMax(); HDebug.Assert(0 == d8);
                    }
                    {
                        Matrix t1 = GetMulImpl(null, false, h1, h1, h1); double d1 = (t0 - t1).HAbsMax(); HDebug.Assert(0 == d1);
                        Matrix t2 = GetMulImpl(null, false, h1, h1, h2); double d2 = (t0 - t2).HAbsMax(); HDebug.Assert(0 == d2);
                        Matrix t3 = GetMulImpl(null, false, h1, h2, h1); double d3 = (t0 - t3).HAbsMax(); HDebug.Assert(0 == d3);
                        Matrix t4 = GetMulImpl(null, false, h1, h2, h2); double d4 = (t0 - t4).HAbsMax(); HDebug.Assert(0 == d4);
                        Matrix t5 = GetMulImpl(null, false, h2, h1, h1); double d5 = (t0 - t5).HAbsMax(); HDebug.Assert(0 == d5);
                        Matrix t6 = GetMulImpl(null, false, h2, h1, h2); double d6 = (t0 - t6).HAbsMax(); HDebug.Assert(0 == d6);
                        Matrix t7 = GetMulImpl(null, false, h2, h2, h1); double d7 = (t0 - t7).HAbsMax(); HDebug.Assert(0 == d7);
                        Matrix t8 = GetMulImpl(null, false, h2, h2, h2); double d8 = (t0 - t8).HAbsMax(); HDebug.Assert(0 == d8);
                    }
                }
            }

            HessMatrix mul = null;

            foreach (HessMatrix mat in mats)
            {
                if (mul == null)
                {
                    mul = mat;
                }
                else
                {
                    mul = GetMulImpl(mul, mat, ila, warning);
                }
            }
            return(mul);
        }
示例#2
0
 public IMatrixSparse <MatrixByArr> GetMatrixSparse()
 {
     if (this is HessMatrixSparse)
     {
         return((this as HessMatrixSparse).GetMatrixSparse());
     }
     if (this is HessMatrixDense)
     {
         return(HessMatrixSparse.FromMatrix(this).GetMatrixSparse());
     }
     if (this is HessMatrixLayeredArray)
     {
         return(this as IMatrixSparse <MatrixByArr>);
     }
     throw new NotImplementedException();
 }
示例#3
0
            private static HessMatrix Get_BInvDC
                (HessMatrix A
                , HessMatrix C
                , HessMatrix D
                , bool process_disp_console
                , string[] options
                , bool parallel = false
                )
            {
                HessMatrix            B_invD_C;
                Dictionary <int, int> Cbr_CCbr = new Dictionary <int, int>();
                List <int>            CCbr_Cbr = new List <int>();

                foreach (ValueTuple <int, int, MatrixByArr> bc_br_bval in C.EnumBlocks())
                {
                    int Cbr = bc_br_bval.Item2;
                    if (Cbr_CCbr.ContainsKey(Cbr) == false)
                    {
                        HDebug.Assert(Cbr_CCbr.Count == CCbr_Cbr.Count);
                        int CCbr = Cbr_CCbr.Count;
                        Cbr_CCbr.Add(Cbr, CCbr);
                        CCbr_Cbr.Add(Cbr);
                        HDebug.Assert(CCbr_Cbr[CCbr] == Cbr);
                    }
                }

                HessMatrix CC = HessMatrixSparse.ZerosSparse(C.ColSize, Cbr_CCbr.Count * 3);

                {
                    Action <ValueTuple <int, int, MatrixByArr> > func = delegate(ValueTuple <int, int, MatrixByArr> bc_br_bval)
                    {
                        int Cbc = bc_br_bval.Item1; int CCbc = Cbc;
                        int Cbr = bc_br_bval.Item2; int CCbr = Cbr_CCbr[Cbr];
                        var bval = bc_br_bval.Item3;
                        lock (CC)
                            CC.SetBlock(CCbc, CCbr, bval);
                    };

                    if (parallel)
                    {
                        Parallel.ForEach(C.EnumBlocks(), func);
                    }
                    else
                    {
                        foreach (var bc_br_bval in C.EnumBlocks())
                        {
                            func(bc_br_bval);
                        }
                    }
                }
                if (process_disp_console)
                {
                    System.Console.Write("squeezeC({0,6}->{1,6} blk), ", C.RowBlockSize, CC.RowBlockSize);
                }
                {
                    /// If a diagonal element of D is null, that row and column should be empty.
                    /// This assume that the atom is removed. In this case, the removed diagonal block
                    /// is replace as the 3x3 identity matrix.
                    ///
                    ///  [B1  0] [ A 0 ]^-1 [C1 C2 C3] = [B1  0] [ A^-1  0    ] [C1 C2 C3]
                    ///  [B2  0] [ 0 I ]    [ 0  0  0]   [B2  0] [ 0     I^-1 ] [ 0  0  0]
                    ///  [B3  0]                         [B3  0]
                    ///                                = [B1.invA  0] [C1 C2 C3]
                    ///                                  [B2.invA  0] [ 0  0  0]
                    ///                                  [B3.invA  0]
                    ///                                = [B1.invA.C1  B1.invA.C2  B1.invA.C3]
                    ///                                  [B2.invA.C1  B2.invA.C2  B2.invA.C3]
                    ///                                  [B3.invA.C1  B3.invA.C2  B3.invA.C3]
                    ///
                    {
                        //HDebug.Exception(D.ColBlockSize == D.RowBlockSize);
                        for (int bi = 0; bi < D.ColBlockSize; bi++)
                        {
                            if (D.HasBlock(bi, bi) == true)
                            {
                                continue;
                            }
                            //for(int bc=0; bc< D.ColBlockSize; bc++) HDebug.Exception( D.HasBlock(bc, bi) == false);
                            //for(int br=0; br< D.RowBlockSize; br++) HDebug.Exception( D.HasBlock(bi, br) == false);
                            //for(int br=0; br<CC.RowBlockSize; br++) HDebug.Exception(CC.HasBlock(bi, br) == false);
                            D.SetBlock(bi, bi, new double[3, 3] {
                                { 1, 0, 0 }, { 0, 1, 0 }, { 0, 0, 1 }
                            });
                        }
                    }

                    HessMatrixSparse BB_invDD_CC;
                    using (new Matlab.NamedLock(""))
                    {
                        Matlab.Execute("clear;");                                                               if (process_disp_console)
                        {
                            System.Console.Write("matlab(");
                        }
                        Matlab.PutMatrix("C", CC);                                                              if (process_disp_console)
                        {
                            System.Console.Write("C");                                                                                                              //Matlab.PutSparseMatrix("C", CC.GetMatrixSparse(), 3, 3);
                        }
                        Matlab.PutMatrix("D", D);                                                               if (process_disp_console)
                        {
                            System.Console.Write("D");
                        }
                        {   // Matlab.Execute("BinvDC = (C' / D) * C;");
                            if (options != null && options.Contains("pinv(D)"))
                            {
                                string msg = Matlab.Execute("BinvDC = (C' / D) * C;", true);
                                if (msg != "")
                                {
                                    Matlab.Execute("BinvDC = C' * pinv(D) * C;");
                                }
                            }
                            else
                            {
                                Matlab.Execute("BinvDC = (C' / D) * C;");
                            }
                        }                                                                                       if (process_disp_console)
                        {
                            System.Console.Write("X");
                        }
                        /// » whos
                        ///   Name         Size                 Bytes  Class     Attributes
                        ///                                                                                 //   before compressing C matrix
                        ///   C         1359x507              5512104  double                               //   C         1359x1545            16797240  double
                        ///   CC        1359x507               198464  double    sparse                     //   CC        1359x1545              206768  double    sparse
                        ///   D         1359x1359            14775048  double                               //   D         1359x1359            14775048  double
                        ///   DD        1359x1359              979280  double    sparse                     //   DD        1359x1359              979280  double    sparse
                        ///   ans          1x1                      8  double
                        ///
                        /// » tic; for i=1:30; A=(C' / D) * C; end; toc         dense  * dense  * dense  => 8.839463 seconds. (win)
                        /// Elapsed time is 8.839463 seconds.
                        /// » tic; for i=1:30; AA=(CC' / DD) * CC; end; toc     sparse * sparse * sparse => 27.945534 seconds.
                        /// Elapsed time is 27.945534 seconds.
                        /// » tic; for i=1:30; AAA=(C' / DD) * C; end; toc      sparse * dense  * sparse => 29.136144 seconds.
                        /// Elapsed time is 29.136144 seconds.
                        /// »
                        /// » tic; for i=1:30; A=(C' / D) * C; end; toc         dense  * dense  * dense  => 8.469071 seconds. (win)
                        /// Elapsed time is 8.469071 seconds.
                        /// » tic; for i=1:30; AA=(CC' / DD) * CC; end; toc     sparse * sparse * sparse => 28.309953 seconds.
                        /// Elapsed time is 28.309953 seconds.
                        /// » tic; for i=1:30; AAA=(C' / DD) * C; end; toc      sparse * dense  * sparse => 28.586375 seconds.
                        /// Elapsed time is 28.586375 seconds.
                        Matrix BBinvDDCC = Matlab.GetMatrix("BinvDC", true);                                    if (process_disp_console)
                        {
                            System.Console.Write("Y");
                        }
                        //Matlab.Execute("[i,j,s] = find(sparse(BinvDC));");
                        //int[] listi = Matlab.GetVectorInt("i");
                        //int[] listj = Matlab.GetVectorInt("j");
                        //double[] lists = Matlab.GetVector("s");
                        //int colsize = Matlab.GetValueInt("size(BinvDC,1)");
                        //int rowsize = Matlab.GetValueInt("size(BinvDC,2)");
                        //Matrix BBinvDDCC = Matrix.Zeros(colsize, rowsize);
                        //for(int i=0; i<listi.Length; i++)
                        //    BBinvDDCC[listi[i], listj[i]] = lists[i];
                        //GC.Collect(0);
                        BB_invDD_CC = HessMatrixSparse.FromMatrix(BBinvDDCC, parallel);                         if (process_disp_console)
                        {
                            System.Console.Write("Z), ");
                        }
                        Matlab.Execute("clear;");
                    }
                    //GC.Collect(0);

                    B_invD_C = HessMatrixSparse.ZerosSparse(C.RowSize, C.RowSize);
                    {
                        //  for(int bcc=0; bcc<CCbr_Cbr.Count; bcc++)
                        //  {
                        //      int bc = CCbr_Cbr[bcc];
                        //      for(int brr=0; brr<CCbr_Cbr.Count; brr++)
                        //      {
                        //          int br   = CCbr_Cbr[brr];
                        //          HDebug.Assert(B_invD_C.HasBlock(bc, br) == false);
                        //          if(BB_invDD_CC.HasBlock(bcc, brr) == false)
                        //              continue;
                        //          var bval = BB_invDD_CC.GetBlock(bcc, brr);
                        //          B_invD_C.SetBlock(bc, br, bval);
                        //          HDebug.Exception(A.HasBlock(bc, bc));
                        //          HDebug.Exception(A.HasBlock(br, br));
                        //      }
                        //  }
                        Action <ValueTuple <int, int, MatrixByArr> > func = delegate(ValueTuple <int, int, MatrixByArr> bcc_brr_bval)
                        {
                            int bcc  = bcc_brr_bval.Item1;
                            int brr  = bcc_brr_bval.Item2;
                            var bval = bcc_brr_bval.Item3;

                            int bc = CCbr_Cbr[bcc];
                            int br = CCbr_Cbr[brr];
                            lock (B_invD_C)
                                B_invD_C.SetBlock(bc, br, bval);
                        };

                        if (parallel)
                        {
                            Parallel.ForEach(BB_invDD_CC.EnumBlocks(), func);
                        }
                        else
                        {
                            foreach (var bcc_brr_bval in BB_invDD_CC.EnumBlocks())
                            {
                                func(bcc_brr_bval);
                            }
                        }
                    }
                }
                GC.Collect(0);
                return(B_invD_C);
            }
示例#4
0
        static HessMatrix GetMulImpl(HessMatrix left, HessMatrix right, ILinAlg ila, bool warning)
        {
            if (HDebug.Selftest())
            {
                Matrix h1 = new double[, ] {
                    { 0, 1, 2, 3, 4, 5 }
                    , { 1, 2, 3, 4, 5, 6 }
                    , { 2, 3, 4, 5, 6, 7 }
                    , { 3, 4, 5, 6, 7, 8 }
                    , { 4, 5, 6, 7, 8, 9 }
                    , { 5, 6, 7, 8, 9, 0 }
                };
                HessMatrix h2    = HessMatrixSparse.FromMatrix(h1);
                Matrix     h11   = Matrix.GetMul(h1, h1);
                HessMatrix h22   = HessMatrix.GetMulImpl(h2, h2, null, false);
                Matrix     hdiff = h11 - h22;
                HDebug.AssertToleranceMatrix(0, hdiff);
            }
            if ((left is HessMatrixDense) && (right is HessMatrixDense))
            {
                if (ila != null)
                {
                    return(new HessMatrixDense {
                        hess = ila.Mul(left, right)
                    });
                }
                if (warning)
                {
                    HDebug.ToDo("Check (HessMatrixDense * HessMatrixDense) !!!");
                }
            }

            Dictionary <int, Dictionary <int, Tuple <int, int, MatrixByArr> > > left_ic_rows = new Dictionary <int, Dictionary <int, Tuple <int, int, MatrixByArr> > >();

            foreach (var ic_row in left.EnumRowBlocksAll())
            {
                left_ic_rows.Add(ic_row.Item1, ic_row.Item2.HToDictionaryWithKeyItem2());
            }

            Dictionary <int, Dictionary <int, Tuple <int, int, MatrixByArr> > > right_ir_cols = new Dictionary <int, Dictionary <int, Tuple <int, int, MatrixByArr> > >();

            foreach (var ir_col in right.EnumColBlocksAll())
            {
                right_ir_cols.Add(ir_col.Item1, ir_col.Item2.HToDictionaryWithKeyItem1());
            }

            HessMatrix mul = null;

            if ((left is HessMatrixDense) && (right is HessMatrixDense))
            {
                mul = HessMatrixDense.ZerosDense(left.ColSize, right.RowSize);
            }
            else
            {
                mul = HessMatrixSparse.ZerosSparse(left.ColSize, right.RowSize);
            }
            for (int ic = 0; ic < left.ColBlockSize; ic++)
            {
                var left_row = left_ic_rows[ic];
                if (left_row.Count == 0)
                {
                    continue;
                }
                for (int ir = 0; ir < right.RowBlockSize; ir++)
                {
                    var right_col = right_ir_cols[ir];
                    if (right_col.Count == 0)
                    {
                        continue;
                    }
                    foreach (var left_ck in left_row)
                    {
                        int ik = left_ck.Key;
                        HDebug.Assert(ic == left_ck.Value.Item1);
                        HDebug.Assert(ik == left_ck.Value.Item2);
                        if (right_col.ContainsKey(ik))
                        {
                            var right_kr = right_col[ik];
                            HDebug.Assert(ik == right_kr.Item1);
                            HDebug.Assert(ir == right_kr.Item2);
                            MatrixByArr mul_ckr = mul.GetBlock(ic, ir) + left_ck.Value.Item3 * right_kr.Item3;
                            mul.SetBlock(ic, ir, mul_ckr);
                        }
                    }
                }
            }

            return(mul);
        }