/// <summary>
/// CRAPL license.
/// </summary>
/// <param name="args"></param>
public static void Main(string[] args)
{
//initialPopulation(organisms);
//while (organisms.Count > 1)
//{
// // Take two random organisms
// Organism[] parents = getTwoParents(organisms);
// // Mate them
// Organism[] children = SimpleReco.getInstance().recombine(parents[0], parents[1]);
// // Profit
// for (var i = 0; i < children.Length; ++i)
// {
// children[i].Died += OrganismDeath;
// organisms.Add(children[i]);
// children[i].start();
// }
// Console.WriteLine(organisms.Count);
//}
//foreach (Organism o in organisms.ToArray())
//{
// o.thread.Join();
// Console.WriteLine(o.ToString());
//}
//Console.WriteLine("FIN - Deaths:" + death + " - Organisms left:" + organisms.Count);
Console.WriteLine("Creating new organisms...");
Mutation blur = new Mutation();
blur.addGeneticModifier(new Blur(new Set(new[] { "rotation", "position" }), Set.ALL, 0.1));
Organism a = new Test(blur);
Organism b = new Test(blur);
Console.WriteLine(a);
Console.WriteLine(b);
Console.WriteLine("Their child:");
RecombinationHandler recombination = SimpleReco.getInstance();
Organism child = recombination.recombine(a, b)[0];
Console.WriteLine(child);
Console.WriteLine("Wild mutations appeared !");
Mutation m = new Mutation();
m.addGeneticModifier(new Addition(new Set(new[] { "scale" }, Set.Mode.Blacklist), new Set(new[] { "bob" }), 50.50));
m.addGeneticModifier(new Addition(new Set(new[] { "position", "scale" }), new Set(new[] { "bob" }), -50.50));
m.addGeneticModifier(new Addition(Set.ALL, new Set(new[] { "Plate" }), 100));
a.mutate(m);
Mutation m2 = new Mutation();
m2.addStructuralModifier(new RemoveExtension(new Set(new[] { "Plate a" })));
b.mutate(m2);
Console.WriteLine(a);
Console.WriteLine(b);
Console.WriteLine(child);
}
public override Organism[] recombine(Organism a, Organism b)
{
IList<Organism> offsprings = new List<Organism>();
var _50p = new Probability(0.5);
var _1p = new Probability(0.01);
for (var i = 0; i < nbrChild; ++i)
{
Organism o = a.createEmpty();
Extension e;
// 50% chance to inherit the base extension from one of the parents.
if (_50p.test())
e = a.genotype.getRootElement();
else
e = b.genotype.getRootElement();
o.genotype.setRootElement(e.localClone());
// The structure recombination is done only for the first level.
var nExtensions = Math.Min(a.genotype.getRootElement().getNumberOfChildExtensions(), b.genotype.getRootElement().getNumberOfChildExtensions());
IEnumerator<Extension> t1 = (IEnumerator <Extension>) a.genotype.getRootElement().getChildsEnumerator();
IEnumerator<Extension> t2 = (IEnumerator <Extension>) b.genotype.getRootElement().getChildsEnumerator();
while (t1.MoveNext() && t2.MoveNext()){
if (_50p.test())
o.genotype.getRootElement().addExtension((Extension)t1.Current.deepClone());
else
o.genotype.getRootElement().addExtension((Extension)t2.Current.deepClone());
}
// Rare mutation that extends plate size.
if (_1p.test())
{
Mutation m = new Mutation();
//m.addGeneticModifier(new Multiplication(new Set(new[] { "scale" }), new Set(new[] { "Plate" }), 1.5));
o.mutate(m);
}
offsprings.Add(o);
}
return offsprings.ToArray<Organism>();
}
private static void initialPopulation(List<Organism> organisms)
{
const int initialPopulationNumber = 2;
// Specifies the initial blur mutation to apply.
Mutation blur = new Mutation();
blur.addGeneticModifier(new Blur(new Set(new[] { "rotation", "position" }), Set.ALL, 0.1));
for (var i = 0; i < initialPopulationNumber; ++i)
{
Organism o = new Test(blur);
organisms.Add(o);
o.Died += OrganismDeath;
Console.WriteLine(o.ToString());
}
foreach (Organism o in organisms.ToArray())
o.start();
}