static void Main(string[] args)
{
// Test the Open/Parse/Close style
using (var parser = new BioParser("sample.bio"))
{
var sequences = parser.Parse();
foreach (var seq in sequences)
{
Console.WriteLine("ID={0}, Alphabet={1}, Data={2}",
seq.ID, seq.Alphabet.Name,
new string(seq.Select(b => (char)b).ToArray()));
}
}
// Test the new/Parse style
foreach (var seq in new BioParser().Parse(new StreamReader("sample.bio")))
{
Console.WriteLine("ID={0}, Alphabet={1}, Data={2}",
seq.ID, seq.Alphabet.Name,
new string(seq.Select(b => (char)b).ToArray()));
}
}
static void Main(string[] args)
{
// Read them in
using (var parser = new BioParser("sample.bio"))
{
var sequences = parser.Parse().ToList();
foreach (var seq in sequences)
{
Console.WriteLine("ID={0}, Alphabet={1}, Data={2}",
seq.ID, seq.Alphabet.Name,
new string(seq.Select(b => (char)b).ToArray()));
}
// Write them out.
using (BioFormatter formatter = new BioFormatter("testout.bio"))
{
foreach (var seq in sequences)
{
formatter.Write(seq);
}
}
}
}