static QuantitationChannelSet()
{
IsobaricTag tmt126 = new IsobaricTag("C8 H15 N", "C{13}4 H4 N{15} O2", "126");
IsobaricTag tmt127l = new IsobaricTag("C8 H15 N{15}", "C{13}4 H4 N O2", "127l");
IsobaricTag tmt127h = new IsobaricTag("C7 C{13} H15 N", "C C{13}3 H4 N{15} O2", "127h");
IsobaricTag tmt128l = new IsobaricTag("C7 C{13} H15 N{15}", "C C{13}3 H4 N O2", "128l");
IsobaricTag tmt128h = new IsobaricTag("C6 C{13}2 H15 N", "C2 C{13}2 H4 N{15} O2", "128h");
IsobaricTag tmt129l = new IsobaricTag("C6 C{13}2 H15 N{15}", "C2 C{13}2 H4 N O2", "129l");
IsobaricTag tmt129h = new IsobaricTag("C5 C{13}3 H15 N", "C3 C{13} H4 N{15} O2", "129h");
IsobaricTag tmt130l = new IsobaricTag("C5 C{13}3 H15 N{15}", "C3 C{13} H4 N O2", "130l");
IsobaricTag tmt130h = new IsobaricTag("C4 C{13}4 H15 N", "C4 H4 N{15} O2", "130h");
IsobaricTag tmt131 = new IsobaricTag("C4 C{13}4 H15 N{15}", "C4 H4 N O2", "131");
TMT6PlexHeavy = new QuantitationChannelSet("TMT 6-Pex (Heavy)", QuantitationChannelSetMassType.Average, false);
TMT6PlexHeavy.Add(tmt126);
TMT6PlexHeavy.Add(tmt127h);
TMT6PlexHeavy.Add(tmt128l);
TMT6PlexHeavy.Add(tmt129h);
TMT6PlexHeavy.Add(tmt130l);
TMT6PlexHeavy.Add(tmt131);
TMT6PlexLight = new QuantitationChannelSet("TMT 6-Pex (Light)", QuantitationChannelSetMassType.Average, false);
TMT6PlexLight.Add(tmt126);
TMT6PlexLight.Add(tmt127l);
TMT6PlexLight.Add(tmt128l);
TMT6PlexLight.Add(tmt129l);
TMT6PlexLight.Add(tmt130l);
TMT6PlexLight.Add(tmt131);
TMT8Plex = new QuantitationChannelSet("TMT 8-Pex", QuantitationChannelSetMassType.Average, false);
TMT8Plex.Add(tmt126);
TMT8Plex.Add(tmt127l);
TMT8Plex.Add(tmt127h);
TMT8Plex.Add(tmt128h);
TMT8Plex.Add(tmt129l);
TMT8Plex.Add(tmt129h);
TMT8Plex.Add(tmt130h);
TMT8Plex.Add(tmt131);
TMT10Plex = new QuantitationChannelSet("TMT 10-Pex", QuantitationChannelSetMassType.Average, false);
TMT10Plex.Add(tmt126);
TMT10Plex.Add(tmt127l);
TMT10Plex.Add(tmt127h);
TMT10Plex.Add(tmt128l);
TMT10Plex.Add(tmt128h);
TMT10Plex.Add(tmt129l);
TMT10Plex.Add(tmt129h);
TMT10Plex.Add(tmt130l);
TMT10Plex.Add(tmt130h);
TMT10Plex.Add(tmt131);
}
static QuantitationChannelSet()
{
IsobaricTag tmt126 = new IsobaricTag("C8 H15 N", "C{13}4 H4 N{15} O2", "126");
IsobaricTag tmt127l = new IsobaricTag("C8 H15 N{15}", "C{13}4 H4 N O2", "127l");
IsobaricTag tmt127h = new IsobaricTag("C7 C{13} H15 N", "C C{13}3 H4 N{15} O2", "127h");
IsobaricTag tmt128l = new IsobaricTag("C7 C{13} H15 N{15}", "C C{13}3 H4 N O2", "128l");
IsobaricTag tmt128h = new IsobaricTag("C6 C{13}2 H15 N", "C2 C{13}2 H4 N{15} O2", "128h");
IsobaricTag tmt129l = new IsobaricTag("C6 C{13}2 H15 N{15}", "C2 C{13}2 H4 N O2", "129l");
IsobaricTag tmt129h = new IsobaricTag("C5 C{13}3 H15 N", "C3 C{13} H4 N{15} O2", "129h");
IsobaricTag tmt130l = new IsobaricTag("C5 C{13}3 H15 N{15}", "C3 C{13} H4 N O2", "130l");
IsobaricTag tmt130h = new IsobaricTag("C4 C{13}4 H15 N", "C4 H4 N{15} O2", "130h");
IsobaricTag tmt131 = new IsobaricTag("C4 C{13}4 H15 N{15}", "C4 H4 N O2", "131");
TMT6PlexHeavy = new QuantitationChannelSet("TMT 6-Pex (Heavy)", QuantitationChannelSetMassType.Average, false);
TMT6PlexHeavy.Add(tmt126);
TMT6PlexHeavy.Add(tmt127h);
TMT6PlexHeavy.Add(tmt128l);
TMT6PlexHeavy.Add(tmt129h);
TMT6PlexHeavy.Add(tmt130l);
TMT6PlexHeavy.Add(tmt131);
TMT6PlexLight = new QuantitationChannelSet("TMT 6-Pex (Light)", QuantitationChannelSetMassType.Average, false);
TMT6PlexLight.Add(tmt126);
TMT6PlexLight.Add(tmt127l);
TMT6PlexLight.Add(tmt128l);
TMT6PlexLight.Add(tmt129l);
TMT6PlexLight.Add(tmt130l);
TMT6PlexLight.Add(tmt131);
TMT8Plex = new QuantitationChannelSet("TMT 8-Pex", QuantitationChannelSetMassType.Average, false);
TMT8Plex.Add(tmt126);
TMT8Plex.Add(tmt127l);
TMT8Plex.Add(tmt127h);
TMT8Plex.Add(tmt128h);
TMT8Plex.Add(tmt129l);
TMT8Plex.Add(tmt129h);
TMT8Plex.Add(tmt130h);
TMT8Plex.Add(tmt131);
TMT10Plex = new QuantitationChannelSet("TMT 10-Pex", QuantitationChannelSetMassType.Average, false);
TMT10Plex.Add(tmt126);
TMT10Plex.Add(tmt127l);
TMT10Plex.Add(tmt127h);
TMT10Plex.Add(tmt128l);
TMT10Plex.Add(tmt128h);
TMT10Plex.Add(tmt129l);
TMT10Plex.Add(tmt129h);
TMT10Plex.Add(tmt130l);
TMT10Plex.Add(tmt130h);
TMT10Plex.Add(tmt131);
}
private static void GetUniquePeptides_helper(IList <QuantitationChannelSet> sets, int setIndex, HashSet <IQuantitationChannel> channels, List <HashSet <IQuantitationChannel> > result)
{
if (setIndex >= sets.Count)
{
result.Add(new HashSet <IQuantitationChannel>(channels));
}
else
{
QuantitationChannelSet currentSet = sets[setIndex];
foreach (IQuantitationChannel channel in currentSet.GetChannels())
{
channels.Add(channel);
GetUniquePeptides_helper(sets, setIndex + 1, channels, result);
channels.Remove(channel);
}
}
}
