C# (CSharp) CQS.Genome.Gtf Gtf2BedGeneIdBuilderOptions示例

示例#1

文件： TestGtf2BedGeneIdBuilder.cs 项目： shengqh/CQS.Test

    public void TestRead()
    {
      var options = new Gtf2BedGeneIdBuilderOptions()
      {
        InputFile = "../../../data/ENSMUSG00000089726.gtf"
      };

      var map = new Gtf2BedGeneIdBuilder(options).ReadBedItems();

      Assert.AreEqual(1, map.Count);
      Assert.AreEqual("ENSMUSG00000089726", map.Keys.First());
      var loc = map["ENSMUSG00000089726"];
      Assert.AreEqual(115042878, loc.Start);
      Assert.AreEqual(115046727, loc.End);
    }

示例#2

文件： Gtf2BedGeneIdBuilder.cs 项目： biosharp-dotnet-labs/CQS.Core

 public Gtf2BedGeneIdBuilder(Gtf2BedGeneIdBuilderOptions options)
 {
     this.options = options;
 }

示例#3

文件： Gtf2BedGeneIdBuilder.cs 项目： shengqh/CQS.Core

 public Gtf2BedGeneIdBuilder(Gtf2BedGeneIdBuilderOptions options)
 {
   this.options = options;
 }