示例#1
0
        public override IEnumerable <string> Process(string fileName)
        {
            var curResult = ChipSeqItemUtils.ReadItems(sourceFiles);
            var curComp   = new Dictionary <string, List <OverlappedChipSeqComparisonItem> >();

            foreach (var res in curResult)
            {
                curComp[res.Key] = (from r in res.Value
                                    select OverlappedChipSeqComparisonItem.Build(r, filenameGroup)).ToList();
            }

            foreach (var g in curComp.Values)
            {
                foreach (var r in g)
                {
                    foreach (var item in r.ItemMap.Values)
                    {
                        item.CalculateFields();
                        item.InitializeDetails(filenameMap);
                    }
                }
            }

            var olist = (from g in curComp.Values
                         from r in g
                         select r).ToList();

            new OverlappedChipSeqComparisonItemFormat().WriteToFile(fileName, olist);

            return(new string[] { fileName });
        }
示例#2
0
        public static OverlappedChipSeqComparisonItem Build(OverlappedChipSeqItem item, Dictionary <string, string> fileNameGroup)
        {
            var result = new OverlappedChipSeqComparisonItem();

            foreach (var csi in item)
            {
                var key = fileNameGroup[csi.Filename];
                result.AddItem(key, csi);
            }

            return(result);
        }
    public static OverlappedChipSeqComparisonItem Build(OverlappedChipSeqItem item, Dictionary<string, string> fileNameGroup)
    {
      var result = new OverlappedChipSeqComparisonItem();

      foreach (var csi in item)
      {
        var key = fileNameGroup[csi.Filename];
        result.AddItem(key, csi);
      }

      return result;
    }