/// <summary>
/// Register the specified analysis.
/// </summary>
/// <param name="analysis">Analysis.</param>
public override void Register(BaseAnalysis analysis)
{
this.RegisterProperty(analysis, "MapFileName", x => this.MapFileName = x);
this.RegisterProperty(analysis, "MapFileLinkType", x => this.MapFileLinkType = x);
this.RegisterProperty(analysis, "MapFileMaxRange", x => this.MapFileMaxRange = x);
this.RegisterProperty(analysis, "MapFilePromoterRange", x => this.MapFilePromoterRange = x);
this.RegisterProperty(analysis, "MapFileConfidenceThreshold", x => this.MapFileConfidenceThreshold = x);
}
/// <summary>
/// Reflects the string arguments.
/// </summary>
/// <param name="analysis">Analysis.</param>
/// <param name="args">Arguments.</param>
protected void ReflectStringArgs(BaseAnalysis analysis, TArgEnum[] args)
{
var argEnumAsString = args.Select(x => x.ToString()).ToList();
var registeredArgs = analysis.ElementArgRegistry
.Where(x => argEnumAsString.Contains(x.Key)).ToList();
foreach (var arg in registeredArgs)
{
arg.Value(this.CommandArgs.StringArgs[arg.Key]);
}
var unregisteredArgs = args.Where(x => !analysis.ElementArgRegistry.ContainsKey(x.ToString())).ToArray();
this.ReflectStringArgs((object)analysis, unregisteredArgs);
}
/// <summary>
/// Registers the property.
/// </summary>
/// <param name="analysis">Analysis.</param>
/// <param name="name">Name.</param>
/// <param name="action">Action.</param>
protected void RegisterProperty(BaseAnalysis analysis, string name, Action <string> action)
{
analysis.ElementArgRegistry.Add(this.PropertyPrefix + name, action);
}
/// <summary> /// Register the specified analysis. /// </summary> /// <param name="analysis">Analysis.</param> public abstract void Register(BaseAnalysis analysis);
/// <summary>
/// Register the specified analysis.
/// </summary>
/// <param name="analysis">Analysis.</param>
public override void Register(BaseAnalysis analysis)
{
analysis.ElementArgRegistry.Add("LocusFileName", (val) => this.LocusFileName = val);
}