/// <summary>
/// Update the version of the specified file.
/// </summary>
/// <param name="fileName"></param>
public static void UpdateFile(string fileName)
{
XmlDocument doc = new XmlDocument();
doc.Load(fileName);
string version = XmlUtilities.Value(doc.DocumentElement, "Version");
if (version != new YieldProphet().Version.ToString())
{
YieldProphet ypSpec = YieldProphetOld.YieldProphetFromXML(doc.DocumentElement, Path.GetDirectoryName(fileName));
string xml = XmlUtilities.Serialise(ypSpec, false, null);
File.WriteAllText(fileName, xml);
}
}
/// <summary>
/// Adds the job to the APSIM cloud.
/// </summary>
/// <param name="yieldProphet">The job specification.</param>
/// <returns>The unique job name.</returns>
public string Add(YieldProphet yieldProphet)
{
DateTime nowDate = DateTime.Now;
if (yieldProphet.Paddock.Count > 0 && yieldProphet.Paddock[0].NowDate != DateTime.MinValue)
nowDate = yieldProphet.Paddock[0].NowDate;
foreach (Paddock paddock in yieldProphet.Paddock)
paddock.NowDate = nowDate;
string newJobName = DateTime.Now.ToString("yyyy-MM-dd (HH-mm-ss) ") + yieldProphet.ReportName;
string xml = YieldProphetUtility.YieldProphetToXML(yieldProphet);
AddAsXML(newJobName, xml);
return newJobName;
}
/// <summary>Converts the old Yield Prophet XML to new XML format capable of deserialisation</summary>
/// <param name="yieldProphetXML">The old Yield Prophet XML</param>
/// <returns>The new Yield Prophet XML</returns>
public static YieldProphet YieldProphetFromXML(XmlNode node, string baseFolder)
{
List <Paddock> simulations = new List <Paddock>();
List <XmlNode> paddocks = XmlUtilities.ChildNodes(node, "Paddock");
for (int p = 0; p < paddocks.Count; p++)
{
try
{
Paddock paddock = CreateSimulationSpec(paddocks[p], baseFolder);
simulations.Add(paddock);
}
catch (Exception err)
{
string name = XmlUtilities.Value(paddocks[p], "Name");
throw new Exception(err.Message + "\r\nPaddock name: " + name);
}
}
YieldProphet simulationsSpec = new YieldProphet
{
Paddock = simulations
};
// Some top level simulation metadata.
string reportDescription = XmlUtilities.Value(node, "ReportDescription");
if (reportDescription != "")
{
simulationsSpec.ReportName = reportDescription;
}
string reportType = XmlUtilities.Value(node, "ReportType");
if (reportType != string.Empty)
{
throw new Exception("Not sure what to do with a ReportType of " + reportType);
}
return(simulationsSpec);
}
/// <summary>Convert the YieldProphet spec to XML.</summary>
/// <returns>The XML string.</returns>
public static string YieldProphetToXML(YieldProphet yieldProphet)
{
XmlSerializer serial = new XmlSerializer(typeof(YieldProphet));
XmlSerializerNamespaces ns = new XmlSerializerNamespaces();
ns.Add("", "");
StringWriter writer = new StringWriter();
serial.Serialize(writer, yieldProphet, ns);
string xml = writer.ToString();
// The code below can cause out of memory error with very large number of simulations
//if (xml.Length > 5 && xml.Substring(0, 5) == "<?xml")
//{
// // remove the first line: <?xml version="1.0"?>/n
// int posEol = xml.IndexOf("\n");
// if (posEol != -1)
// return xml.Substring(posEol + 1);
//}
return(xml);
}
/// <summary>Converts a Yield Prophet specification to an APSIM one.</summary>
/// <param name="yieldProphet">The yield prophet spec.</param>
/// <returns>The list of APSIM simulations that will need to be run.</returns>
public static List <APSIMSpecification> ToAPSIM(YieldProphet yieldProphet)
{
List <APSIMSpecification> apsimSpecs = new List <APSIMSpecification>();
foreach (Paddock paddock in yieldProphet.Paddock)
{
APSIMSpecification simulation;
try
{
simulation = CreateBaseSimulation(paddock);
}
catch (Exception err)
{
simulation = new APSIMSpecification();
simulation.ErrorMessage = err.Message;
}
simulation.Name = paddock.Name;
apsimSpecs.Add(simulation);
}
return(apsimSpecs);
}
/// <summary>Converts the old Yield Prophet XML to new XML format capable of deserialisation</summary>
/// <param name="yieldProphetXML">The old Yield Prophet XML</param>
/// <returns>The new Yield Prophet XML</returns>
public static YieldProphet YieldProphetFromXML(XmlNode node, string baseFolder)
{
List<Paddock> simulations = new List<Paddock>();
List<XmlNode> paddocks = XmlUtilities.ChildNodes(node, "Paddock");
for (int p = 0; p < paddocks.Count; p++)
{
try
{
Paddock paddock = CreateSimulationSpec(paddocks[p], baseFolder);
simulations.Add(paddock);
}
catch (Exception err)
{
string name = XmlUtilities.Value(paddocks[p], "Name");
throw new Exception(err.Message + "\r\nPaddock name: " + name);
}
}
YieldProphet simulationsSpec = new YieldProphet();
simulationsSpec.Paddock = simulations;
// Some top level simulation metadata.
string reportDescription = XmlUtilities.Value(node, "ReportDescription");
if (reportDescription != "")
simulationsSpec.ReportName = reportDescription;
string reportType = XmlUtilities.Value(node, "ReportType");
if (reportType == "Crop Report (Complete)")
simulationsSpec.ReportType = YieldProphet.ReportTypeEnum.Crop;
else if (reportType == "Sowing Opportunity Report")
simulationsSpec.ReportType = YieldProphet.ReportTypeEnum.SowingOpportunity;
simulationsSpec.ClientName = XmlUtilities.Value(node, "GrowerName");
simulationsSpec.ReportGeneratedBy = XmlUtilities.Value(node, "LoginName");
return simulationsSpec;
}
/// <summary>Convert the YieldProphet spec to XML.</summary>
/// <returns>The XML string.</returns>
public static string YieldProphetToXML(YieldProphet yieldProphet)
{
XmlSerializer serial = new XmlSerializer(typeof(YieldProphet));
XmlSerializerNamespaces ns = new XmlSerializerNamespaces();
ns.Add("", "");
StringWriter writer = new StringWriter();
serial.Serialize(writer, yieldProphet, ns);
string xml = writer.ToString();
if (xml.Length > 5 && xml.Substring(0, 5) == "<?xml")
{
// remove the first line: <?xml version="1.0"?>/n
int posEol = xml.IndexOf("\n");
if (posEol != -1)
return xml.Substring(posEol + 1);
}
return xml;
}
/// <summary>Initialise job manager</summary>
private void Initialise(bool createSims = true)
{
Errors = new List <string>();
try
{
// Create a working directory.
WorkingDirectory = Path.Combine(Path.GetTempPath(), Path.GetRandomFileName());
Directory.CreateDirectory(WorkingDirectory);
// Create a YieldProphet object if xml was provided
string fileBaseToWrite = "YieldProphet";
if (specXMLToRun != null)
{
if (specXMLToRun.Contains("<YieldProphet>"))
{
specToRun = YieldProphetUtility.YieldProphetFromXML(specXMLToRun, WorkingDirectory);
allSimulations = YieldProphetToAPSIM.ToAPSIM(specToRun);
if (specToRun.ReportName != null)
{
fileBaseToWrite = specToRun.ReportName;
}
}
else
{
XmlDocument doc = new XmlDocument();
doc.LoadXml(specXMLToRun);
allSimulations = XmlUtilities.Deserialise(doc.DocumentElement, typeof(List <APSIMSpecification>)) as List <APSIMSpecification>;
}
}
else if (specToRun != null)
{
allSimulations = YieldProphetToAPSIM.ToAPSIM(specToRun);
}
// Create all the files needed to run APSIM.
string fileToWrite;
if (environment.APSIMxBuildNumber > 0)
{
fileToWrite = fileBaseToWrite + ".apsimx";
}
else
{
fileToWrite = fileBaseToWrite + ".apsim";
}
string apsimFileName = APSIMFiles.Create(allSimulations, WorkingDirectory, fileToWrite);
// Save YieldProphet.xml to working folder.
if (specToRun != null)
{
XmlDocument doc = new XmlDocument();
doc.LoadXml(YieldProphetUtility.YieldProphetToXML(specToRun));
doc.Save(Path.Combine(WorkingDirectory, fileBaseToWrite + ".xml"));
}
if (createSims)
{
// Setup the runtime environment.
binFolder = SetupRunTimeEnvironment(environment);
// Go find APSIM executable
if (environment.APSIMxBuildNumber > 0)
{
jobsToRun = GetJobToRunAPSIMX(apsimFileName, binFolder);
}
else
{
jobsToRun = GetJobToRunAPSIMClassic(apsimFileName, binFolder);
}
}
// Copy all errors to our errors list.
foreach (var sim in allSimulations.FindAll(sim => sim.ErrorMessage != null))
{
Errors.Add(sim.ErrorMessage);
}
}
catch (Exception err)
{
Errors.Add(err.ToString());
}
}
/// <summary>Constructor</summary>
/// <param name="yp">The YieldProphet spec to run</param>
/// <param name="environment">The runtime environment to use for the run</param>
public RunYPJob(YieldProphet yp, RuntimeEnvironment environment)
{
specToRun = yp;
this.environment = environment;
Initialise();
}
