private Dictionary <string, bool> FindMerValues(string merAsString, Dictionary <string, AASeq> caseToCompressedAASeq, out Dictionary <bool, int> valueToNonZeroCount)
{
Regex merAsRegex = AASeq.CreateMerRegex(merAsString);
Dictionary <string, bool> merValues = new Dictionary <string, bool>();
valueToNonZeroCount = new Dictionary <bool, int>();
foreach (KeyValuePair <string, AASeq> caseIdAndCompressedAASeq in caseToCompressedAASeq)
{
string caseId = caseIdAndCompressedAASeq.Key;
AASeq compressedAASeq = caseIdAndCompressedAASeq.Value;
bool?containsMer = compressedAASeq.ContainsMer(merAsString, merAsRegex);
if (null != containsMer)
{
merValues.Add(caseId, (bool)containsMer);
valueToNonZeroCount[(bool)containsMer] = 1 + SpecialFunctions.GetValueOrDefault(valueToNonZeroCount, (bool)containsMer);
}
}
return(merValues);
}