protected override string CreateReportLine(
ModelScorer modelScorer,
PhyloTree phyloTree,
RowData rowAndTargetData,
UniversalWorkList workList,
int rowIndex, int workListCount, int workIndex)
{
Dictionary <string, string> row = rowAndTargetData.Row;
string predictorVariable = row[PhyloTree.PredictorVariableColumnName]; // e.g. hla
string targetVariable = row[PhyloTree.TargetVariableColumnName]; // e.g. A@182 (amino acid "A" at position 182)
int nullIndex = int.Parse(row[PhyloTree.NullIndexColumnName]);
//Dictionary<string, bool> caseIdToNonMissingPredictorValue = workList.NullIndexToPredictorToCaseIdToNonMissingValue[nullIndex][predictorVariable];
Dictionary <string, SufficientStatistics> caseIdToNonMissingPredictorValue = rowAndTargetData.PredictorData; //workList.GetCaseIdToNonMissingValueForNullIndexAndPredictorVariable(nullIndex, predictorVariable);
Dictionary <string, SufficientStatistics> caseIdToNonMissingTargetValue = rowAndTargetData.TargetData;
TwoByTwo fishers2by2 = TwoByTwo.GetInstance(
SufficientStatisticsMapToIntMap(caseIdToNonMissingPredictorValue),
SufficientStatisticsMapToIntMap(caseIdToNonMissingTargetValue));
double pValue = fishers2by2.FisherExactTest;
string reportLine = SpecialFunctions.CreateTabString(this, rowIndex, workListCount, workIndex, nullIndex,
predictorVariable,
targetVariable,
fishers2by2.CountsString(),
fishers2by2.FisherExactTest);
return(reportLine);
}
public static EvaluationResultsFisher GetInstance(ModelEvaluatorDiscreteFisher modelEvaluatorDiscreteFisher, List <Score> nullScores, Score altScore, TwoByTwo fishers2by2)
{
double pValue = fishers2by2.FisherExactTest;
int[] fisherCounts = fishers2by2.ToOneDArray();
return(new EvaluationResultsFisher(modelEvaluatorDiscreteFisher, nullScores, altScore, fisherCounts, 1, pValue));
}
static void Main(string[] args)
{
var input = System.IO.File.ReadAllLines(@"C:\Users\shashi.dadi\Desktop\Advent of code\Day21.txt");
var twoByTwoPatterns = new TwoByTwo();
var threeByThreePatterns = new ThreeByThree();
}
