public TransitionDocNode(Transition id,
TransitionLosses losses,
TypedMass massH,
TransitionQuantInfo quantInfo)
: this(id, Annotations.EMPTY, losses, massH, quantInfo, null)
{
}
public TransitionDocNode(Transition id,
TransitionLosses losses,
TypedMass massH,
TransitionQuantInfo quantInfo,
ExplicitTransitionValues explicitTransitionValues)
: this(id, Annotations.EMPTY, losses, massH, quantInfo, explicitTransitionValues, null)
{
}
public TransitionQuantInfo UseValuesFrom(TransitionQuantInfo existing)
{
var isotopeDistInfo = IsotopeDistInfo;
var libInfo = LibInfo;
Helpers.AssignIfEquals(ref isotopeDistInfo, existing.IsotopeDistInfo);
Helpers.AssignIfEquals(ref libInfo, existing.LibInfo);
return(new TransitionQuantInfo(isotopeDistInfo, libInfo, existing.Quantititative));
}
public TransitionDocNode(Transition id,
Annotations annotations,
TransitionLosses losses,
TypedMass mass,
TransitionQuantInfo transitionQuantInfo,
Results <TransitionChromInfo> results)
: base(id, annotations)
{
Losses = losses;
if (losses != null)
{
mass -= losses.Mass;
}
Mz = id.IsCustom() ?
new SignedMz(id.Adduct.MzFromNeutralMass(mass), id.IsNegative()) :
new SignedMz(SequenceMassCalc.GetMZ(mass, id.Adduct) + SequenceMassCalc.GetPeptideInterval(id.DecoyMassShift), id.IsNegative());
MzMassType = mass.MassType;
IsotopeDistInfo = transitionQuantInfo.IsotopeDistInfo;
LibInfo = transitionQuantInfo.LibInfo;
Results = results;
Quantitative = transitionQuantInfo.Quantititative;
}
