/// <summary>
/// Gets the map file names for cell line and all rna sources
/// </summary>
/// <returns>The map file names.</returns>
/// <param name="tissue">Cell line.</param>
public string[][] GetMapFileNamesWithThreshold(string tissue)
{
return(RnaSources.Select(rnaSource =>
Thresholds.Select(threshhold =>
TissueTag.Replace(
RnaSourceTag.Replace(
ThresholdTag.Replace(MapFileFormat, threshhold),
rnaSource),
tissue))
.ToArray())
.ToArray());
}
/// <summary>
/// Gets the map file names for cell line a single rna sources
/// without any threshold selection
/// </summary>
/// <returns>The map file names.</returns>
/// <param name="tissue">Cell line.</param>
public string GetMapFileName(string tissue, string rnaSource, string histoneName)
{
return(HistoneTag.Replace(TissueTag.Replace(RnaSourceTag.Replace(StringValues["MapFileName"], rnaSource), tissue), histoneName));
}
