/// <summary>Execute a command and return a single line of output as a String</summary>
/// <param name="dir">Working directory for the command</param>
/// <param name="command">as component array</param>
/// <param name="encoding"></param>
/// <returns>the one-line output of the command</returns>
protected internal static string ReadPipe(FilePath dir, string[] command, string
encoding)
{
try
{
SystemProcess p = Runtime.GetRuntime().Exec(command, null, dir);
BufferedReader lineRead = new BufferedReader(new InputStreamReader(p.GetInputStream
(), encoding));
string r = null;
try
{
r = lineRead.ReadLine();
}
finally
{
p.GetOutputStream().Close();
p.GetErrorStream().Close();
lineRead.Close();
}
for (; ;)
{
try
{
if (p.WaitFor() == 0 && r != null && r.Length > 0)
{
return(r);
}
break;
}
catch (Exception)
{
}
}
}
catch (IOException e)
{
// Stop bothering me, I have a zombie to reap.
if (SystemReader.GetInstance().GetProperty("jgit.fs.debug") != null)
{
System.Console.Error.WriteLine(e);
}
}
// Ignore error (but report)
return(null);
}
/// <summary>Run a hook script in the repository, returning the exit status.</summary>
/// <remarks>Run a hook script in the repository, returning the exit status.</remarks>
/// <param name="db">repository the script should see in GIT_DIR environment</param>
/// <param name="hook">
/// path of the hook script to execute, must be executable file
/// type on this platform
/// </param>
/// <param name="args">arguments to pass to the hook script</param>
/// <returns>exit status code of the invoked hook</returns>
/// <exception cref="System.IO.IOException">the hook could not be executed</exception>
/// <exception cref="System.Exception">the caller was interrupted before the hook completed
/// </exception>
protected internal virtual int RunHook(Repository db, FilePath hook, params string
[] args)
{
string[] argv = new string[1 + args.Length];
argv[0] = hook.GetAbsolutePath();
System.Array.Copy(args, 0, argv, 1, args.Length);
IDictionary <string, string> env = CloneEnv();
env.Put("GIT_DIR", db.Directory.GetAbsolutePath());
PutPersonIdent(env, "AUTHOR", author);
PutPersonIdent(env, "COMMITTER", committer);
FilePath cwd = db.WorkTree;
SystemProcess p = Runtime.GetRuntime().Exec(argv, ToEnvArray(env), cwd);
p.GetOutputStream().Close();
p.GetErrorStream().Close();
p.GetInputStream().Close();
return(p.WaitFor());
}
/// <summary>Execute a command and return a single line of output as a String</summary>
/// <param name="dir">Working directory for the command</param>
/// <param name="command">as component array</param>
/// <param name="encoding"></param>
/// <returns>the one-line output of the command</returns>
protected internal static string ReadPipe(FilePath dir, string[] command, string
encoding)
{
try
{
SystemProcess p = Runtime.GetRuntime().Exec(command, null, dir);
BufferedReader lineRead = new BufferedReader(new InputStreamReader(p.GetInputStream
(), encoding));
string r = null;
try
{
r = lineRead.ReadLine();
}
finally
{
p.GetOutputStream().Close();
p.GetErrorStream().Close();
lineRead.Close();
}
for (; ;)
{
try
{
if (p.WaitFor() == 0 && r != null && r.Length > 0)
{
return(r);
}
break;
}
catch (Exception)
{
}
}
}
catch (IOException)
{
}
// Stop bothering me, I have a zombie to reap.
// ignore
return(null);
}
/// <exception cref="System.IO.IOException"/>
/// <exception cref="Org.Apache.Hadoop.Yarn.Exceptions.YarnException"/>
public virtual void LaunchAM(ApplicationAttemptId attemptId)
{
Credentials credentials = new Credentials();
Org.Apache.Hadoop.Security.Token.Token <AMRMTokenIdentifier> token = rmClient.GetAMRMToken
(attemptId.GetApplicationId());
// Service will be empty but that's okay, we are just passing down only
// AMRMToken down to the real AM which eventually sets the correct
// service-address.
credentials.AddToken(token.GetService(), token);
FilePath tokenFile = FilePath.CreateTempFile("unmanagedAMRMToken", string.Empty,
new FilePath(Runtime.GetProperty("user.dir")));
try
{
FileUtil.Chmod(tokenFile.GetAbsolutePath(), "600");
}
catch (Exception ex)
{
throw new RuntimeException(ex);
}
tokenFile.DeleteOnExit();
DataOutputStream os = new DataOutputStream(new FileOutputStream(tokenFile, true));
credentials.WriteTokenStorageToStream(os);
os.Close();
IDictionary <string, string> env = Sharpen.Runtime.GetEnv();
AList <string> envAMList = new AList <string>();
bool setClasspath = false;
foreach (KeyValuePair <string, string> entry in env)
{
string key = entry.Key;
string value = entry.Value;
if (key.Equals("CLASSPATH"))
{
setClasspath = true;
if (classpath != null)
{
value = value + FilePath.pathSeparator + classpath;
}
}
envAMList.AddItem(key + "=" + value);
}
if (!setClasspath && classpath != null)
{
envAMList.AddItem("CLASSPATH=" + classpath);
}
ContainerId containerId = ContainerId.NewContainerId(attemptId, 0);
string hostname = Sharpen.Runtime.GetLocalHost().GetHostName();
envAMList.AddItem(ApplicationConstants.Environment.ContainerId.ToString() + "=" +
containerId);
envAMList.AddItem(ApplicationConstants.Environment.NmHost.ToString() + "=" + hostname
);
envAMList.AddItem(ApplicationConstants.Environment.NmHttpPort.ToString() + "=0");
envAMList.AddItem(ApplicationConstants.Environment.NmPort.ToString() + "=0");
envAMList.AddItem(ApplicationConstants.Environment.LocalDirs.ToString() + "= /tmp"
);
envAMList.AddItem(ApplicationConstants.AppSubmitTimeEnv + "=" + Runtime.CurrentTimeMillis
());
envAMList.AddItem(ApplicationConstants.ContainerTokenFileEnvName + "=" + tokenFile
.GetAbsolutePath());
string[] envAM = new string[envAMList.Count];
SystemProcess amProc = Runtime.GetRuntime().Exec(amCmd, Sharpen.Collections.ToArray
(envAMList, envAM));
BufferedReader errReader = new BufferedReader(new InputStreamReader(amProc.GetErrorStream
(), Sharpen.Extensions.GetEncoding("UTF-8")));
BufferedReader inReader = new BufferedReader(new InputStreamReader(amProc.GetInputStream
(), Sharpen.Extensions.GetEncoding("UTF-8")));
// read error and input streams as this would free up the buffers
// free the error stream buffer
Sharpen.Thread errThread = new _Thread_244(errReader);
Sharpen.Thread outThread = new _Thread_258(inReader);
try
{
errThread.Start();
outThread.Start();
}
catch (InvalidOperationException)
{
}
// wait for the process to finish and check the exit code
try
{
int exitCode = amProc.WaitFor();
Log.Info("AM process exited with value: " + exitCode);
}
catch (Exception e)
{
Sharpen.Runtime.PrintStackTrace(e);
}
finally
{
amCompleted = true;
}
try
{
// make sure that the error thread exits
// on Windows these threads sometimes get stuck and hang the execution
// timeout and join later after destroying the process.
errThread.Join();
outThread.Join();
errReader.Close();
inReader.Close();
}
catch (Exception ie)
{
Log.Info("ShellExecutor: Interrupted while reading the error/out stream", ie);
}
catch (IOException ioe)
{
Log.Warn("Error while closing the error/out stream", ioe);
}
amProc.Destroy();
}
/// <exception cref="System.IO.IOException"/>
internal override long DoIO(Reporter reporter, string name, long totalSize)
{
totalSize *= Mega;
// create instance of local filesystem
FileSystem localFS = FileSystem.GetLocal(fsConfig);
try
{
// native runtime
Runtime runTime = Runtime.GetRuntime();
// copy the dso and executable from dfs
lock (this)
{
localFS.Delete(HdfsTestDir, true);
if (!(localFS.Mkdirs(HdfsTestDir)))
{
throw new IOException("Failed to create " + HdfsTestDir + " on local filesystem");
}
}
lock (this)
{
if (!localFS.Exists(HdfsShlib))
{
if (!FileUtil.Copy(fs, HdfsShlib, localFS, HdfsShlib, false, fsConfig))
{
throw new IOException("Failed to copy " + HdfsShlib + " to local filesystem");
}
string chmodCmd = new string(Chmod + " a+x " + HdfsShlib);
SystemProcess process = runTime.Exec(chmodCmd);
int exitStatus = process.WaitFor();
if (exitStatus != 0)
{
throw new IOException(chmodCmd + ": Failed with exitStatus: " + exitStatus);
}
}
}
lock (this)
{
if (!localFS.Exists(HdfsRead))
{
if (!FileUtil.Copy(fs, HdfsRead, localFS, HdfsRead, false, fsConfig))
{
throw new IOException("Failed to copy " + HdfsRead + " to local filesystem");
}
string chmodCmd = new string(Chmod + " a+x " + HdfsRead);
SystemProcess process = runTime.Exec(chmodCmd);
int exitStatus = process.WaitFor();
if (exitStatus != 0)
{
throw new IOException(chmodCmd + ": Failed with exitStatus: " + exitStatus);
}
}
}
// exec the C program
Path inFile = new Path(DataDir, name);
string readCmd = new string(HdfsRead + " " + inFile + " " + totalSize + " " + bufferSize
);
SystemProcess process_1 = runTime.Exec(readCmd, null, new FilePath(HdfsTestDir.ToString
()));
int exitStatus_1 = process_1.WaitFor();
if (exitStatus_1 != 0)
{
throw new IOException(HdfsRead + ": Failed with exitStatus: " + exitStatus_1);
}
}
catch (Exception interruptedException)
{
reporter.SetStatus(interruptedException.ToString());
}
finally
{
localFS.Close();
}
return(totalSize);
}
/// <summary>Execute a command and return a single line of output as a String</summary>
/// <param name="dir">Working directory for the command</param>
/// <param name="command">as component array</param>
/// <param name="encoding"></param>
/// <returns>the one-line output of the command</returns>
protected internal static string ReadPipe(FilePath dir, string[] command, string
encoding)
{
bool debug = System.Boolean.Parse(SystemReader.GetInstance().GetProperty("jgit.fs.debug"
));
try
{
if (debug)
{
System.Console.Error.WriteLine("readpipe " + Arrays.AsList(command) + "," + dir);
}
SystemProcess p = Runtime.GetRuntime().Exec(command, null, dir);
BufferedReader lineRead = new BufferedReader(new InputStreamReader(p.GetInputStream
(), encoding));
p.GetOutputStream().Close();
AtomicBoolean gooblerFail = new AtomicBoolean(false);
Sharpen.Thread gobbler = new _Thread_300(p, debug, gooblerFail);
// ignore
// Just print on stderr for debugging
// Just print on stderr for debugging
gobbler.Start();
string r = null;
try
{
r = lineRead.ReadLine();
if (debug)
{
System.Console.Error.WriteLine("readpipe may return '" + r + "'");
System.Console.Error.WriteLine("(ignoring remaing output:");
}
string l;
while ((l = lineRead.ReadLine()) != null)
{
if (debug)
{
System.Console.Error.WriteLine(l);
}
}
}
finally
{
p.GetErrorStream().Close();
lineRead.Close();
}
for (; ;)
{
try
{
int rc = p.WaitFor();
gobbler.Join();
if (rc == 0 && r != null && r.Length > 0 && !gooblerFail.Get())
{
return(r);
}
if (debug)
{
System.Console.Error.WriteLine("readpipe rc=" + rc);
}
break;
}
catch (Exception)
{
}
}
}
catch (IOException e)
{
// Stop bothering me, I have a zombie to reap.
if (debug)
{
System.Console.Error.WriteLine(e);
}
}
// Ignore error (but report)
if (debug)
{
System.Console.Error.WriteLine("readpipe returns null");
}
return(null);
}