示例#1
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 public TumorNormalEnrichmentRunner(TumorNormalEnrichmentInput input)
 {
     _tumorNormalOptions       = input.TumorNormalOptions;
     _normalBam                = input.NormalBam;
     _manifest                 = input.Manifest;
     CommonOptions             = input.CommonOptions;
     SingleSampleCommonOptions = input.SingleSampleCommonOptions;
 }
示例#2
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 public TumorNormalEnrichmentRunner(CommonOptions commonOptions, SingleSampleCommonOptions singleSampleCommonOptions, TumorNormalOptions tumorNormalOptions, IFileLocation normalBam, IFileLocation manifest)
 {
     _tumorNormalOptions       = tumorNormalOptions;
     _normalBam                = normalBam;
     _manifest                 = manifest;
     CommonOptions             = commonOptions;
     SingleSampleCommonOptions = singleSampleCommonOptions;
 }
示例#3
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 public TumorNormalWgsRunner(CommonOptions commonOptions, SingleSampleCommonOptions singleSampleCommonOptions, TumorNormalOptions tumorNormalOptions)
 {
     _tumorNormalOptions       = tumorNormalOptions;
     CommonOptions             = commonOptions;
     SingleSampleCommonOptions = singleSampleCommonOptions;
 }
示例#4
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 public TumorNormalWgsRunner(TumorNormalWgsInput input)
 {
     _tumorNormalOptions       = input.TumorNormalOptions;
     CommonOptions             = input.CommonOptions;
     SingleSampleCommonOptions = input.SingleSampleCommonOptions;
 }
示例#5
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 public GermlineWgsRunner(CommonOptions commonOptions, SingleSampleCommonOptions singleSampleCommonOptions, IFileLocation bam)
 {
     _bam                      = bam;
     CommonOptions             = commonOptions;
     SingleSampleCommonOptions = singleSampleCommonOptions;
 }
示例#6
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 public SomaticEnrichmentRunner(CommonOptions commonOptions, SingleSampleCommonOptions singleSampleCommonOptions, SomaticEnrichmentOptions somaticEnrichmentOptions)
 {
     _somaticEnrichmentOptions = somaticEnrichmentOptions;
     CommonOptions             = commonOptions;
     SingleSampleCommonOptions = singleSampleCommonOptions;
 }