public IEnumerable <ISequence <IAminoAcid> > Parse(Stream inputStream)
{
var sequences = new List <Sequence>();
var reader = new StreamReader(inputStream);
while (!reader.EndOfStream)
{
var sequence = new Sequence();
sequence.Process(reader);
sequences.Add(sequence);
}
//for now only proteins (amino acids) AND only the FIRST one are assumed in the fasta file
var proteins = new List <Protein>();
foreach (var sequence in sequences)
{
var protein = new Protein();
protein.Description = sequence.Comment;
foreach (char letter in sequence.Letters)
{
protein.Add(AminoAcids.FromLetter(letter));
}
proteins.Add(protein);
}
return(proteins);
}
private void LoadWeekProtein()
{
var protein = MainWindow.UserNutritionRepository.GetSumsOfProtein(MainWindow.UserId, 7);
foreach (var i in protein)
{
Protein.Add(new GraphicPoint()
{
Date = i.Key.ToShortDateString(), Number = i.Value
});
}
}
