public bool BuildLibrary(LibraryBuildAction libraryBuildAction, IProgressMonitor progressMonitor, ref IProgressStatus status, out string commandArgs, out string messageLog, out string[] ambiguous)
{
// Arguments for BlibBuild
// ReSharper disable LocalizableElement
List <string> argv = new List <string> {
"-s", "-A", "-H"
}; // Read from stdin, get ambiguous match messages, high precision modifications
if (DebugMode)
{
argv.Add("-v"); // Verbose for debugging
argv.Add("debug");
}
if (libraryBuildAction == LibraryBuildAction.Create)
{
argv.Add("-o");
}
if (CutOffScore.HasValue)
{
argv.Add("-c");
argv.Add(CutOffScore.Value.ToString(CultureInfo.InvariantCulture));
}
if (CompressLevel.HasValue)
{
argv.Add("-l");
argv.Add(CompressLevel.Value.ToString(CultureInfo.InvariantCulture));
}
if (!string.IsNullOrEmpty(Authority))
{
argv.Add("-a");
argv.Add(Authority);
}
if (!string.IsNullOrEmpty(Id))
{
argv.Add("-i");
argv.Add(Id);
}
if (IncludeAmbiguousMatches)
{
argv.Add("-K");
}
if (PreferEmbeddedSpectra == true)
{
argv.Add("-E");
}
string dirCommon = PathEx.GetCommonRoot(InputFiles);
string stdinFilename = Path.GetTempFileName();
argv.Add($"-S \"{stdinFilename}\"");
using (var stdinFile = new StreamWriter(stdinFilename, false, new UTF8Encoding(false)))
{
foreach (string fileName in InputFiles)
{
stdinFile.WriteLine(PathEx.RemovePrefix(fileName, dirCommon));
}
if (TargetSequences != null)
{
argv.Add("-U");
stdinFile.WriteLine();
foreach (string targetSequence in TargetSequences)
{
stdinFile.WriteLine(targetSequence);
}
}
stdinFile.Close();
}
// ReSharper restore LocalizableElement
// ReSharper disable LocalizableElement
argv.Add("\"" + OutputPath + "\"");
// ReSharper restore LocalizableElement
var psiBlibBuilder = new ProcessStartInfo(EXE_BLIB_BUILD)
{
CreateNoWindow = true,
UseShellExecute = false,
// Common directory includes the directory separator
WorkingDirectory = dirCommon.Substring(0, dirCommon.Length - 1),
Arguments = string.Join(@" ", argv.ToArray()),
RedirectStandardOutput = true,
RedirectStandardError = true,
RedirectStandardInput = false,
StandardOutputEncoding = Encoding.UTF8,
StandardErrorEncoding = Encoding.UTF8
};
bool isComplete = false;
ambiguous = new string[0];
messageLog = string.Empty;
try
{
const string ambiguousPrefix = @"AMBIGUOUS:";
var processRunner = new ProcessRunner {
MessagePrefix = DebugMode ? string.Empty : ambiguousPrefix
};
processRunner.Run(psiBlibBuilder, null, progressMonitor, ref status);
isComplete = status.IsComplete;
if (isComplete)
{
var messages = processRunner.MessageLog();
messageLog = string.Join(Environment.NewLine, processRunner.MessageLog());
if (DebugMode)
{
messages = messages.Where(l => l.StartsWith(ambiguousPrefix))
.Select(l => l.Substring(ambiguousPrefix.Length));
}
ambiguous = messages.Distinct().OrderBy(s => s).ToArray();
}
}
finally
{
// Keep a copy of what got sent to BlibBuild for debugging purposes
commandArgs = psiBlibBuilder.Arguments + Environment.NewLine + string.Join(Environment.NewLine, File.ReadAllLines(stdinFilename));
File.Delete(stdinFilename);
if (!isComplete)
{
// If something happened (error or cancel) to end processing, then
// get rid of the possibly partial library.
File.Delete(OutputPath);
File.Delete(OutputPath + EXT_SQLITE_JOURNAL);
}
}
return(isComplete);
}
public bool BuildLibrary(LibraryBuildAction libraryBuildAction, IProgressMonitor progressMonitor, ref IProgressStatus status, out string[] ambiguous)
{
// Arguments for BlibBuild
// ReSharper disable NonLocalizedString
List <string> argv = new List <string> {
"-s", "-A"
}; // Read from stdin, get ambiguous match messages
if (libraryBuildAction == LibraryBuildAction.Create)
{
argv.Add("-o");
}
if (CutOffScore.HasValue)
{
argv.Add("-c");
argv.Add(CutOffScore.Value.ToString(CultureInfo.InvariantCulture));
}
if (CompressLevel.HasValue)
{
argv.Add("-l");
argv.Add(CompressLevel.Value.ToString(CultureInfo.InvariantCulture));
}
if (!string.IsNullOrEmpty(Authority))
{
argv.Add("-a");
argv.Add(Authority);
}
if (!string.IsNullOrEmpty(Id))
{
argv.Add("-i");
argv.Add(Id);
}
if (IncludeAmbiguousMatches)
{
argv.Add("-K");
}
string dirCommon = PathEx.GetCommonRoot(InputFiles);
var stdinBuilder = new StringBuilder();
foreach (string fileName in InputFiles)
{
stdinBuilder.AppendLine(fileName.Substring(dirCommon.Length));
}
if (TargetSequences != null)
{
argv.Add("-U");
stdinBuilder.AppendLine();
foreach (string targetSequence in TargetSequences)
{
stdinBuilder.AppendLine(targetSequence);
}
}
// ReSharper restore NonLocalizedString
argv.Add("\"" + OutputPath + "\""); // Not L10N
var psiBlibBuilder = new ProcessStartInfo(EXE_BLIB_BUILD)
{
CreateNoWindow = true,
UseShellExecute = false,
// Common directory includes the directory separator
WorkingDirectory = dirCommon.Substring(0, dirCommon.Length - 1),
Arguments = string.Join(" ", argv.ToArray()), // Not L10N
RedirectStandardOutput = true,
RedirectStandardError = true,
RedirectStandardInput = true
};
bool isComplete = false;
ambiguous = new string[0];
try
{
var processRunner = new ProcessRunner {
MessagePrefix = "AMBIGUOUS:"
}; // Not L10N
processRunner.Run(psiBlibBuilder, stdinBuilder.ToString(), progressMonitor, ref status);
isComplete = status.IsComplete;
if (isComplete)
{
ambiguous = processRunner.MessageLog().Distinct().OrderBy(s => s).ToArray();
}
}
finally
{
if (!isComplete)
{
// If something happened (error or cancel) to end processing, then
// get rid of the possibly partial library.
File.Delete(OutputPath);
File.Delete(OutputPath + EXT_SQLITE_JOURNAL);
}
}
return(isComplete);
}
