public void WriteDataWithAnnotationColumnsTest()
{
// main data
IDataWithAnnotationColumns mdata = PerseusFactory.CreateDataWithAnnotationColumns();
// annotation columns
mdata.AddStringColumn("strcol1", "this is stringcol1", new[] { "1", "2" });
mdata.AddStringColumn("strcol2", "", new[] { "", "hallo" });
mdata.AddNumericColumn("numcol", "", new[] { 1.0, 2.0 });
mdata.AddMultiNumericColumn("multnumcol", "this is multnumcol", new[] { new[] { -2.0, 2.0 }, new double[] {} });
mdata.AddCategoryColumn("catcol", "", new[] { new[] { "cat1", "cat1.1" }, new[] { "cat2", "cat1" } });
string mdataStr;
using (MemoryStream memstream = new MemoryStream())
using (StreamWriter writer = new StreamWriter(memstream)) {
PerseusUtils.WriteDataWithAnnotationColumns(mdata, writer);
writer.Flush();
mdataStr = Encoding.UTF8.GetString(memstream.ToArray());
}
IMatrixData mdata3 = PerseusFactory.CreateMatrixData();
PerseusUtils.ReadMatrix(mdata3, new ProcessInfo(new Settings(), status => { }, progress => { }, 1, i => { }),
() => {
StreamReader tmpStream = new StreamReader(new MemoryStream(Encoding.UTF8.GetBytes(mdataStr)));
return(tmpStream);
}, "matrix1", '\t');
IDataWithAnnotationColumns mdata2 = mdata3;
Assert.AreEqual(2, mdata2.RowCount);
Assert.AreEqual(2, mdata2.StringColumnCount);
Assert.AreEqual(1, mdata2.NumericColumnCount);
Assert.AreEqual(1, mdata2.CategoryColumnCount);
Assert.AreEqual(1, mdata2.MultiNumericColumnCount);
Assert.AreEqual("hallo", mdata2.StringColumns[mdata2.StringColumnNames.FindIndex(col => col.Equals("strcol2"))][1]);
}