// test that we can create an empty file and add matrices
public static void CreateMatrixTest(string file)
{
int zones = 3;
double[,] testblock;
string[] matrixNames = { "mat1", "mat2" };
OmxWriteStream ws = OmxFile.Create(file, zones, true);
// NOTE: cannot create data type until after file stream is created
H5DataTypeId matrixDataTypes = H5T.copy(H5T.H5Type.NATIVE_DOUBLE);
for (int i = 0; i < matrixNames.Length; i++)
{
ws.AddMatrix(matrixNames[i], matrixDataTypes);
}
ws.Close();
OmxReadStream rs = OmxFile.OpenReadOnly(file);
for (int i = 0; i < matrixNames.Length; i++)
{
testblock = rs.GetMatrixBlock <double>(matrixNames[i], 0, 0, 1, 1);
}
Console.WriteLine("mat shape is {0},{1}", rs.Shape[0], rs.Shape[1]);
Console.WriteLine("mat names are {0},{1}", rs.MatrixNames[0], rs.MatrixNames[1]);
Console.WriteLine("mat data type: {0},{1}",
H5T.getClass(rs.GetMatrixDataType(matrixNames[0])),
H5T.getClass(rs.GetMatrixDataType(matrixNames[1])));
rs.Close();
}
// test read/write row function
public static void ReadWriteRowTest(string file, string matName)
{
OmxWriteStream ws = OmxFile.OpenReadWrite(file);
Console.WriteLine("mat shape is {0},{1}", ws.Shape[0], ws.Shape[1]);
H5DataTypeId dt = ws.GetMatrixDataType(matName);
// blocks we are reading need to match the data type of the matrix
var rowData = new double[ws.Shape[0]];
var rowData2 = new double[ws.Shape[0]];
rowData = ws.GetMatrixRow <double>(matName, 2);
rowData[2] = rowData[2] + 1.0;
ws.SetMatrixRow <double>(matName, 2, rowData);
rowData2 = ws.GetMatrixRow <double>(matName, 2);
if (rowData.Sum() == rowData2.Sum())
{
Console.WriteLine("Row Read/Write successful");
}
else
{
Console.WriteLine("Read/Write mismatch");
}
ws.Close();
}
// Test that we can read an OMX file with attributes and tables
public static void ReadTest(string file)
{
OmxReadStream rs = OmxFile.OpenReadOnly(file);
Console.WriteLine("OMX version is {0}", rs.OmxVersion);
Console.WriteLine("mat shape is {0},{1}", rs.Shape[0], rs.Shape[1]);
Console.WriteLine("first mat names is {0}", rs.MatrixNames[0]);
Console.WriteLine("first mat data type is {0}", H5T.getClass(rs.GetMatrixDataType(rs.MatrixNames[0])));
rs.Close();
}
// test that we can store and retrieve index maps
public static void MappingTest(string testCSharp, string testMtx)
{
//test mapping the data to a new set of ids
OmxWriteStream ws = OmxFile.OpenReadWrite(testCSharp);
int zones = (int)ws.Shape[0];
int[] testMap = new int[zones];
for (int i = 0; i < zones; i++)
{
testMap[i] = i + 2;
}
string mapName = "mapping";
H5DataTypeId mapData = H5T.copy(H5T.H5Type.NATIVE_INT);
// create map
ws.CreateMapping <int>(testMap, mapData, mapName);
// get map data type
H5DataTypeId returnedData = ws.GetMappingDataType(mapName);
if (mapData.GetType().Equals(returnedData.GetType()))
{
Console.WriteLine("Mapping data match");
}
else
{
Console.WriteLine("Mapping data MISMATCH");
}
// read map and use it to read data from matrix
int[] testReadMap = ws.GetMapping <int>(mapName);
Console.WriteLine("value for map at 2 is {0}", testReadMap[2]);
int offsetsize = Convert.ToInt32(zones) - 2;
double[,] omxTestReadMap = ws.GetMatrixBlock <double>(testMtx, testReadMap[0], testReadMap[0], offsetsize, offsetsize);
Console.WriteLine("Value for matrix at 4,4 is {0}", omxTestReadMap[4, 4]);
ws.Close();
}
// test that we can read/write with a created matrix tables
public static void ReadWriteTablesTest(string testCSharp, string testMtx)
{
int zones = 200;
//make a file and some data
OmxWriteStream ws = OmxFile.Create(testCSharp, zones, true);
double[,] MtxTest = new double[zones, zones];
for (int i = 0; i < zones; i++)
{
for (int j = 0; j < zones; j++)
{
MtxTest[i, j] = Convert.ToDouble(i + j);
}
}
H5DataTypeId matrixTypeId = H5T.copy(H5T.H5Type.NATIVE_DOUBLE);
ws.AddMatrix(testMtx, matrixTypeId);
ws.SetMatrix <double>(testMtx, MtxTest);
ws.Close();
//now open the file again and read the data back in
OmxReadStream rs = OmxFile.OpenReadOnly(testCSharp);
double[,] omxTestRead = rs.GetMatrix <double>(testMtx);
double testValue = MtxTest[4, 4];
double testValue2 = omxTestRead[4, 4];
if (testValue == testValue2)
{
Console.WriteLine(" Value match success");
}
else
{
Console.WriteLine(" Value match failure");
}
rs.Close();
}