public static void write_locus_version_6(BinaryWriter bw, LocusEntry locus_entry)
{
bw.Write(locus_entry.ilmn_id);
bw.Write(locus_entry.name);
foreach (string str in locus_entry.after_name_string1)
{
bw.Write(str);
}
bw.Write(locus_entry.after_name_byte);
foreach (string str in locus_entry.after_name_string2)
{
bw.Write(str);
}
bw.Write(locus_entry.snp);
bw.Write(locus_entry.chrom);
foreach (string str in locus_entry.after_chrom_string)
{
bw.Write(str);
}
bw.Write(locus_entry.map_info.ToString());
foreach (string str in locus_entry.after_map_info_string)
{
bw.Write(str);
}
bw.Write(locus_entry.address_a);
bw.Write(locus_entry.address_b);
foreach (string str in locus_entry.after_address_string)
{
bw.Write(str);
}
bw.Write(locus_entry.after_address_byte);
bw.Write((byte)locus_entry.assay_type);
}
public static void Writer(BinaryWriter bw, LocusEntry locus_entry)
{
bw.Write(locus_entry.version);
if (locus_entry.version == 6)
{
write_locus_version_6(bw, locus_entry);
}
else if (locus_entry.version == 7)
{
write_locus_version_7(bw, locus_entry);
}
else if (locus_entry.version == 8)
{
write_locus_version_8(bw, locus_entry);
}
else
{
throw new Exception("Manifest format error: unknown version for locus entry (" + locus_entry.version + ")");
}
}
public static void write_locus_version_8(BinaryWriter bw, LocusEntry locus_entry)
{
write_locus_version_7(bw, locus_entry);
bw.Write(RefStrand.to_string(locus_entry.ref_strand));
}
public static void write_locus_version_7(BinaryWriter bw, LocusEntry locus_entry)
{
write_locus_version_6(bw, locus_entry);
bw.Write(locus_entry.after_ver6_byte);
}
