示例#1
0
        public void test_KineticLaw_Parameter_ancestor_create_model()
        {
            Model      m  = new Model(2, 4);
            Reaction   r  = m.createReaction();
            KineticLaw kl = m.createKineticLaw();
            Parameter  p  = m.createKineticLawParameter();

            assertTrue(kl.getNumParameters() == 1);
            ListOfParameters lop = kl.getListOfParameters();

            assertTrue(p.getAncestorOfType(libsbml.SBML_KINETIC_LAW) == kl);
            assertTrue(p.getAncestorOfType(libsbml.SBML_LIST_OF) == lop);
            assertTrue(p.getAncestorOfType(libsbml.SBML_REACTION) == r);
            assertTrue(p.getAncestorOfType(libsbml.SBML_MODEL) == m);
            assertTrue(p.getAncestorOfType(libsbml.SBML_DOCUMENT) == null);
            assertTrue(p.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null);
            Parameter obj = kl.getParameter(0);

            assertTrue(obj.getAncestorOfType(libsbml.SBML_KINETIC_LAW) == kl);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lop);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_REACTION) == r);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_MODEL) == m);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null);
            kl = null;
        }
        public void test_KineticLaw_Parameter_parent_create()
        {
            KineticLaw kl = new KineticLaw(2, 4);
            Parameter  p  = kl.createParameter();

            assertTrue(kl.getNumParameters() == 1);
            ListOfParameters lop = kl.getListOfParameters();

            assertTrue(kl == lop.getParentSBMLObject());
            assertTrue(lop == p.getParentSBMLObject());
            assertTrue(lop == kl.getParameter(0).getParentSBMLObject());
            kl = null;
        }
        public void test_KineticLaw_Parameter_parent_create_model()
        {
            Model      m  = new Model(2, 4);
            Reaction   r  = m.createReaction();
            KineticLaw kl = m.createKineticLaw();
            Parameter  p  = m.createKineticLawParameter();

            assertTrue(kl.getNumParameters() == 1);
            ListOfParameters lop = kl.getListOfParameters();

            assertTrue(r == kl.getParentSBMLObject());
            assertTrue(kl == lop.getParentSBMLObject());
            assertTrue(lop == p.getParentSBMLObject());
            assertTrue(lop == kl.getParameter(0).getParentSBMLObject());
            kl = null;
        }
        public void test_KineticLaw_Parameter_parent_add()
        {
            KineticLaw kl = new KineticLaw(2, 4);
            Parameter  p  = new Parameter(2, 4);

            p.setId("jake");
            kl.addParameter(p);
            p = null;
            assertTrue(kl.getNumParameters() == 1);
            assertTrue(kl.getParameter(0).getId() == "jake");
            ListOfParameters lop = kl.getListOfParameters();

            assertTrue(kl == lop.getParentSBMLObject());
            assertTrue(lop == kl.getParameter(0).getParentSBMLObject());
            kl = null;
        }
示例#5
0
        public void test_KineticLaw_Parameter_ancestor_add()
        {
            KineticLaw kl = new KineticLaw(2, 4);
            Parameter  p  = new Parameter(2, 4);

            p.setId("jake");
            kl.addParameter(p);
            p = null;
            ListOfParameters lop = kl.getListOfParameters();
            Parameter        obj = kl.getParameter(0);

            assertTrue(obj.getAncestorOfType(libsbml.SBML_KINETIC_LAW) == kl);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lop);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null);
            kl = null;
        }
示例#6
0
        public void test_KineticLaw_Parameter_ancestor_create()
        {
            KineticLaw kl = new KineticLaw(2, 4);
            Parameter  p  = kl.createParameter();

            assertTrue(kl.getNumParameters() == 1);
            ListOfParameters lop = kl.getListOfParameters();

            assertTrue(p.getAncestorOfType(libsbml.SBML_KINETIC_LAW) == kl);
            assertTrue(p.getAncestorOfType(libsbml.SBML_LIST_OF) == lop);
            assertTrue(p.getAncestorOfType(libsbml.SBML_DOCUMENT) == null);
            assertTrue(p.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null);
            Parameter obj = kl.getParameter(0);

            assertTrue(obj.getAncestorOfType(libsbml.SBML_KINETIC_LAW) == kl);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lop);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null);
            assertTrue(obj.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null);
            kl = null;
        }
示例#7
0
        static void testClone(SBase s)
        {
            string ename = s.getElementName();
            SBase  c     = s.clone();

            if (c is Compartment)
            {
                Compartment x = (s as Compartment).clone(); c = x;
            }
            else if (c is CompartmentType)
            {
                CompartmentType x = (s as CompartmentType).clone(); c = x;
            }
            else if (c is Constraint)
            {
                Constraint x = (s as Constraint).clone(); c = x;
            }
            else if (c is Delay)
            {
                Delay x = (s as Delay).clone(); c = x;
            }
            else if (c is Event)
            {
                Event x = (s as Event).clone(); c = x;
            }
            else if (c is EventAssignment)
            {
                EventAssignment x = (s as EventAssignment).clone(); c = x;
            }
            else if (c is FunctionDefinition)
            {
                FunctionDefinition x = (s as FunctionDefinition).clone(); c = x;
            }
            else if (c is InitialAssignment)
            {
                InitialAssignment x = (s as InitialAssignment).clone(); c = x;
            }
            else if (c is KineticLaw)
            {
                KineticLaw x = (s as KineticLaw).clone(); c = x;
            }
            // currently return type of ListOf::clone() is SBase
            else if (c is ListOf)
            {
                SBase x = (s as ListOf).clone(); c = x;
            }
            else if (c is Model)
            {
                Model x = (s as Model).clone(); c = x;
            }
            else if (c is Parameter)
            {
                Parameter x = (s as Parameter).clone(); c = x;
            }
            else if (c is Reaction)
            {
                Reaction x = (s as Reaction).clone(); c = x;
            }
            else if (c is AlgebraicRule)
            {
                AlgebraicRule x = (s as AlgebraicRule).clone(); c = x;
            }
            else if (c is AssignmentRule)
            {
                AssignmentRule x = (s as AssignmentRule).clone(); c = x;
            }
            else if (c is RateRule)
            {
                RateRule x = (s as RateRule).clone(); c = x;
            }
            else if (c is SBMLDocument)
            {
                SBMLDocument x = (s as SBMLDocument).clone(); c = x;
            }
            else if (c is Species)
            {
                Species x = (s as Species).clone(); c = x;
            }
            else if (c is SpeciesReference)
            {
                SpeciesReference x = (s as SpeciesReference).clone(); c = x;
            }
            else if (c is SpeciesType)
            {
                SpeciesType x = (s as SpeciesType).clone(); c = x;
            }
            else if (c is SpeciesReference)
            {
                SpeciesReference x = (s as SpeciesReference).clone(); c = x;
            }
            else if (c is StoichiometryMath)
            {
                StoichiometryMath x = (s as StoichiometryMath).clone(); c = x;
            }
            else if (c is Trigger)
            {
                Trigger x = (s as Trigger).clone(); c = x;
            }
            else if (c is Unit)
            {
                Unit x = (s as Unit).clone(); c = x;
            }
            else if (c is UnitDefinition)
            {
                UnitDefinition x = (s as UnitDefinition).clone(); c = x;
            }
            else if (c is ListOfCompartmentTypes)
            {
                ListOfCompartmentTypes x = (s as ListOfCompartmentTypes).clone(); c = x;
            }
            else if (c is ListOfCompartments)
            {
                ListOfCompartments x = (s as ListOfCompartments).clone(); c = x;
            }
            else if (c is ListOfConstraints)
            {
                ListOfConstraints x = (s as ListOfConstraints).clone(); c = x;
            }
            else if (c is ListOfEventAssignments)
            {
                ListOfEventAssignments x = (s as ListOfEventAssignments).clone(); c = x;
            }
            else if (c is ListOfEvents)
            {
                ListOfEvents x = (s as ListOfEvents).clone(); c = x;
            }
            else if (c is ListOfFunctionDefinitions)
            {
                ListOfFunctionDefinitions x = (s as ListOfFunctionDefinitions).clone(); c = x;
            }
            else if (c is ListOfInitialAssignments)
            {
                ListOfInitialAssignments x = (s as ListOfInitialAssignments).clone(); c = x;
            }
            else if (c is ListOfParameters)
            {
                ListOfParameters x = (s as ListOfParameters).clone(); c = x;
            }
            else if (c is ListOfReactions)
            {
                ListOfReactions x = (s as ListOfReactions).clone(); c = x;
            }
            else if (c is ListOfRules)
            {
                ListOfRules x = (s as ListOfRules).clone(); c = x;
            }
            else if (c is ListOfSpecies)
            {
                ListOfSpecies x = (s as ListOfSpecies).clone(); c = x;
            }
            else if (c is ListOfSpeciesReferences)
            {
                ListOfSpeciesReferences x = (s as ListOfSpeciesReferences).clone(); c = x;
            }
            else if (c is ListOfSpeciesTypes)
            {
                ListOfSpeciesTypes x = (s as ListOfSpeciesTypes).clone(); c = x;
            }
            else if (c is ListOfUnitDefinitions)
            {
                ListOfUnitDefinitions x = (s as ListOfUnitDefinitions).clone(); c = x;
            }
            else if (c is ListOfUnits)
            {
                ListOfUnits x = (s as ListOfUnits).clone(); c = x;
            }
            else
            {
                ERR("[testClone] Error: (" + ename + ") : clone() failed.");
                return;
            }

            if (c == null)
            {
                ERR("[testClone] Error: (" + ename + ") : clone() failed.");
                return;
            }

            string enameClone = c.getElementName();

            if (ename == enameClone)
            {
                //Console.Out.WriteLine("[testClone] OK: (" + ename + ") clone(" + enameClone + ") : type match.");
                OK();
            }
            else
            {
                ERR("[testClone] Error: (" + ename + ") clone(" + enameClone + ") : type mismatch.");
            }
        }