public void Save(ISession session)
{
var dbPeptideFileAnalysis = session.Get <DbPeptideFileAnalysis>(PeptideFileAnalysis.Id);
DeleteResults(session, dbPeptideFileAnalysis);
dbPeptideFileAnalysis.PrecursorEnrichment = PrecursorEnrichment;
dbPeptideFileAnalysis.PrecursorEnrichmentFormula = PrecursorEnrichmentFormula == null ? null : PrecursorEnrichmentFormula.ToString();
dbPeptideFileAnalysis.TracerPercent = TracerPercent;
dbPeptideFileAnalysis.Turnover = Turnover;
dbPeptideFileAnalysis.TurnoverScore = TurnoverScore;
dbPeptideFileAnalysis.DeconvolutionScore = DeconvolutionScore;
dbPeptideFileAnalysis.IntegrationNote = IntegrationNote.ToString();
dbPeptideFileAnalysis.PeakCount = Peaks.Count;
session.Update(dbPeptideFileAnalysis);
var tracerFormulae = PeptideFileAnalysis.TurnoverCalculator.ListTracerFormulas();
for (int i = 0; i < tracerFormulae.Count; i++)
{
var peak = _peaks[tracerFormulae[i]];
var dbPeak = new DbPeak
{
PeptideFileAnalysis = dbPeptideFileAnalysis,
PeakIndex = i,
Area = peak.Area,
StartTime = peak.StartTime,
EndTime = peak.EndTime,
};
session.Save(dbPeak);
}
}
public void SetAcceptIntegrationNotes(IEnumerable <IntegrationNote> integrationNotes)
{
Settings.SetSetting(SettingEnum.accept_integration_notes, IntegrationNote.ToString(integrationNotes));
}
public IEnumerable <IntegrationNote> GetAcceptIntegrationNotes()
{
return(IntegrationNote.ParseCollection(Settings.GetSetting(SettingEnum.accept_integration_notes,
IntegrationNote.ToString(new[] { IntegrationNote.Manual, IntegrationNote.Success, }))));
}