/// <summary>
/// Parses the sequences from the open file.
/// </summary>
/// <param name="parser">Sequence Parser</param>
/// <param name="filename">File to parse</param>
/// <returns>Set of parsed sequences.</returns>
public static ISequenceAlignment ParseOne(this ISequenceAlignmentParser parser, string filename)
{
using (var fs = File.OpenRead(filename))
return(parser.ParseOne(fs));
}
/// <summary>
/// Parses the sequences from the open file.
/// </summary>
/// <param name="parser">Sequence Parser</param>
/// <param name="filename">File to parse</param>
/// <returns>Set of parsed sequences.</returns>
public static T ParseOne <T>(this ISequenceAlignmentParser parser, string filename)
where T : ISequenceAlignment
{
using (var fs = File.OpenRead(filename))
return((T)parser.ParseOne(fs));
}
/// <summary>
/// Parses the sequences from the open file.
/// </summary>
/// <param name="parser">Sequence Parser</param>
/// <returns>Set of parsed sequences.</returns>
public static ISequenceAlignment ParseOne(this ISequenceAlignmentParser parser)
{
var fs = ParserFormatterExtensions <ISequenceAlignmentParser> .GetOpenStream(parser, false);
return(parser.ParseOne(fs));
}
