示例#1
0
        public static void QcDIA(IRawDataPlus rawFile, WorkflowParameters parameters)
        {
            rawFile.SelectInstrument(Device.MS, 1);

            rawFile.CheckIfBoxcar();

            ScanIndex Index = Extract.ScanIndices(rawFile);

            MethodDataContainer methodData = Extract.MethodData(rawFile, Index);

            CentroidStreamCollection centroidStreams = new CentroidStreamCollection();

            SegmentScanCollection segmentScans = new SegmentScanCollection();

            (centroidStreams, segmentScans) = Extract.MsData(rawFile: rawFile, index: Index);

            TrailerExtraCollection trailerExtras = Extract.TrailerExtras(rawFile, Index);

            RetentionTimeCollection retentionTimes = Extract.RetentionTimes(rawFile, Index);

            ScanMetaDataCollectionDIA metaData = MetaDataProcessingDIA.AggregateMetaDataDIA(centroidStreams, segmentScans, methodData,
                                                                                            trailerExtras, retentionTimes, Index);

            RawMetricsDataDIA metrics = MetaDataProcessingDIA.GetMetricsDataDIA(metaData, methodData, rawFile.FileName, retentionTimes, Index);

            QcDataContainer qcData = new QcDataContainer();

            qcData.DIA = metrics;

            QcDataCollection qcDataCollection = QC.QcWorkflow.LoadOrCreateQcCollection(parameters);

            QC.QcWorkflow.UpdateQcCollection(qcDataCollection, qcData, methodData, rawFile.FileName);
        }