private void MaterialTypeComboBox_SelectedIndexChanged(object sender, EventArgs e)
{
acq.item_type = (string)((ComboBox)sender).SelectedItem;
INCCSelector sel = new INCCSelector(acq.detector_id, acq.item_type);
AnalysisMethods lam;
bool found = NC.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out lam);
if (found)
{
am = new AnalysisMethods(sel);
am.CopySettings(lam);
ActivePassiveCheckBox.Checked = am.choices[(int)AnalysisMethod.ActivePassive];
ActiveCalCurveCheckBox.Checked = am.choices[(int)AnalysisMethod.Active];
ActiveMultCheckBox.Checked = am.choices[(int)AnalysisMethod.ActiveMultiplicity];
CollarCheckBox.Checked = am.choices[(int)AnalysisMethod.Collar];
PassiveCalCurveCheckBox.Checked = am.choices[(int)AnalysisMethod.CalibrationCurve];
KnownAlphaCheckBox.Checked = am.choices[(int)AnalysisMethod.KnownA];
KnownMCheckBox.Checked = am.choices[(int)AnalysisMethod.KnownM];
PassiveMultiplicityCheckBox.Checked = am.choices[(int)AnalysisMethod.Multiplicity];
AddASourceCheckBox.Checked = am.choices[(int)AnalysisMethod.AddASource];
CuRatioCheckBox.Checked = am.choices[(int)AnalysisMethod.CuriumRatio];
TruncatedMultCheckBox.Checked = am.choices[(int)AnalysisMethod.TruncatedMultiplicity];
collaractive();
}
else
{
// create an AM marked None and insert in Map here, set modified flag
am = new AnalysisMethods(sel);
NC.App.DB.DetectorMaterialAnalysisMethods.Add(sel, am);
am.modified = true;
}
}
private void MaterialTypeComboBox_SelectedIndexChanged(object sender, EventArgs e)
{
acq.item_type = (string)((ComboBox)sender).SelectedItem;
INCCSelector sel = new INCCSelector(acq.detector_id, acq.item_type);
AnalysisMethods lam;
bool found = NC.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out lam);
if (found)
{
am = new AnalysisMethods(sel);
am.CopySettings(lam);
ActivePassiveCheckBox.Checked = am.choices[(int)AnalysisMethod.ActivePassive];
ActiveCalCurveCheckBox.Checked = am.choices[(int)AnalysisMethod.Active];
ActiveMultCheckBox.Checked = am.choices[(int)AnalysisMethod.ActiveMultiplicity];
CollarAmLiCheckBox.Checked = am.choices[(int)AnalysisMethod.CollarAmLi] && (acq.collar_mode == (int)CollarType.AmLiThermal || acq.collar_mode == (int)CollarType.AmLiFast);
CollarCfCheckBox.Checked = am.choices[(int)AnalysisMethod.CollarCf] && (acq.collar_mode == (int)CollarType.CfThermal || acq.collar_mode == (int)CollarType.CfFast);
PassiveCalCurveCheckBox.Checked = am.choices[(int)AnalysisMethod.CalibrationCurve];
KnownAlphaCheckBox.Checked = am.choices[(int)AnalysisMethod.KnownA];
KnownMCheckBox.Checked = am.choices[(int)AnalysisMethod.KnownM];
PassiveMultiplicityCheckBox.Checked = am.choices[(int)AnalysisMethod.Multiplicity];
AddASourceCheckBox.Checked = am.choices[(int)AnalysisMethod.AddASource];
CuRatioCheckBox.Checked = am.choices[(int)AnalysisMethod.CuriumRatio];
TruncatedMultCheckBox.Checked = am.choices[(int)AnalysisMethod.TruncatedMultiplicity];
collaractive();
}
else
{
// create an AM marked None and insert in Map here, set modified flag
am = new AnalysisMethods(sel);
NC.App.DB.DetectorMaterialAnalysisMethods.Add(sel, am);
am.modified = true;
}
}
public static AnalysisMethods GetMethodSelections(string det, string mat)
{
INCCSelector sel = new INCCSelector(det, mat);
AnalysisMethods lam;
bool found = CentralizedState.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out lam);
return(lam);
}
public void UpdateAnalysisMethod(INCCSelector sel, AnalysisMethods ams)
{
DB.AnalysisMethodSpecifiers db = new DB.AnalysisMethodSpecifiers();
if (ams.modified)
{
UpdateAnalysisMethods(sel, ams, db);
}
UpdateAnalysisMethodSpecifics(sel.detectorid, sel.material, db);
}
private void OKBtn_Click(object sender, EventArgs e)
{
if (modified)
{
AnalysisMethod am = AnalysisMethod.CalibrationCurve;
INCCAnalysisParams.INCCMethodDescriptor c = ams.GetMethodParameters(am);
((INCCAnalysisParams.cal_curve_rec)c).percent_u235 = percent;
INCCSelector sel = new INCCSelector(acq.detector_id, acq.item_type);
NC.App.DB.UpdateAnalysisMethod(sel, ams); // flush changes on internal map to the DB
}
DialogResult = System.Windows.Forms.DialogResult.OK;
Close();
}
public void UpdateAnalysisMethods(INCCSelector sel, AnalysisMethods am, DB.AnalysisMethodSpecifiers db = null)
{
if (db == null)
{
db = new DB.AnalysisMethodSpecifiers();
}
DB.ElementList saParams;
saParams = am.ToDBElementList();
if (!db.Update(sel.detectorid, sel.material, saParams)) // am not there, so add it
{
NC.App.Pest.logger.TraceEvent(LogLevels.Verbose, 34027, "Failed to update analysis method spec for " + sel.ToString());
}
else
{
NC.App.Pest.logger.TraceEvent(LogLevels.Verbose, 34026, "Updated/created analysis method spec for " + sel.ToString());
}
am.modified = false;
}
public void Persist()
{
if (imd.modified)
{
if (ams == null) // HN No analysis methods existed.
{
ams = new AnalysisMethods();
ams.AddMethod(am, imd);
}
if (ams.HasMethod(am)) // if found, update the existing parameter values
{
INCCAnalysisParams.INCCMethodDescriptor c = ams.GetMethodParameters(am);
imd.CopyTo(c); // This a virtual so imd can be the primary type
}
else // add the new method params under the current method key
{
ams.AddMethod(am, imd);
}
INCCSelector sel = new INCCSelector(acq.detector_id, acq.item_type);
N.App.DB.UpdateAnalysisMethod(sel, ams); // flush changes on internal map to the DB
}
}
internal static unsafe cal_curve_rec MoveCC(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.cal_curve_rec imr = (INCCAnalysisParams.cal_curve_rec)md;
cal_curve_rec m = new cal_curve_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.cal_curve_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.cal_curve_item_type);
m.cc_a = imr.cev.a;
m.cc_b = imr.cev.b;
m.cc_c = imr.cev.c;
m.cc_d = imr.cev.d;
m.cc_cal_curve_type = (double)imr.CalCurveType;
m.cc_covar_ab = imr.cev.covar(Coeff.a, Coeff.b);
m.cc_covar_ac = imr.cev.covar(Coeff.a, Coeff.c);
m.cc_covar_ad = imr.cev.covar(Coeff.a, Coeff.d);
m.cc_covar_bc = imr.cev.covar(Coeff.b, Coeff.c);
m.cc_covar_bd = imr.cev.covar(Coeff.b, Coeff.d);
m.cc_covar_cd = imr.cev.covar(Coeff.c, Coeff.d);
m.cc_var_a = imr.cev.var_a;
m.cc_var_b = imr.cev.var_b;
m.cc_var_c = imr.cev.var_c;
m.cc_var_d = imr.cev.var_d;
m.cc_sigma_x = imr.cev.sigma_x;
m.cc_upper_mass_limit = imr.cev.upper_mass_limit;
m.cc_lower_mass_limit = imr.cev.lower_mass_limit;
m.cc_heavy_metal_corr_factor = imr.heavy_metal_corr_factor;
m.cc_heavy_metal_reference = imr.heavy_metal_reference;
m.cc_cal_curve_type = (double)imr.CalCurveType;
m.cc_percent_u235 = imr.percent_u235;
TransferUtils.CopyDbls(imr.dcl_mass, m.cc_dcl_mass);
TransferUtils.CopyDbls(imr.doubles, m.cc_doubles);
return m;
}
void ApplyCoefficients(INCCAnalysisParams.CurveEquationVals coeff, CalibrationCurveList cclist)
{
INCCSelector sel = new INCCSelector(det.Id.DetectorId, Material);
AnalysisMethods lam;
bool found = N.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out lam);
if (!found)
{
lam = new AnalysisMethods(sel);
}
if (!lam.HasMethod(AnalysisMethod)) // create it from scratch here ????
{
MessageBox.Show(string.Format("{0} method not specified for detector {1} and material {2}",
AnalysisMethod.FullName(), det.Id.DetectorId, Material),
"Coefficient File Ingester", MessageBoxButtons.OK);
return;
}
INCCAnalysisParams.INCCMethodDescriptor imd = lam.GetMethodParameters(AnalysisMethod);
switch (AnalysisMethod)
{
case AnalysisMethod.CalibrationCurve:
INCCAnalysisParams.cal_curve_rec c = (INCCAnalysisParams.cal_curve_rec)imd;
CopyCoefficients(coeff, c.cev);
c.cev.cal_curve_equation = CurveEquation;
c.cev.lower_mass_limit = cclist.LowerMassLimit;
c.cev.upper_mass_limit = cclist.UpperMassLimit;
c.dcl_mass = cclist.MassAsArray;
c.doubles = cclist.DoublesAsArray;
break;
case AnalysisMethod.KnownA:
INCCAnalysisParams.known_alpha_rec ka = (INCCAnalysisParams.known_alpha_rec)imd;
CopyCoefficients(coeff, ka.cev);
ka.cev.cal_curve_equation = CurveEquation;
ka.cev.lower_mass_limit = cclist.LowerMassLimit;
ka.cev.upper_mass_limit = cclist.UpperMassLimit;
ka.dcl_mass = cclist.MassAsArray;
ka.doubles = cclist.DoublesAsArray;
break;
case AnalysisMethod.AddASource:
INCCAnalysisParams.add_a_source_rec aas = (INCCAnalysisParams.add_a_source_rec)imd;
CopyCoefficients(coeff, aas.cev);
aas.cev.cal_curve_equation = CurveEquation;
aas.cev.lower_mass_limit = cclist.LowerMassLimit;
aas.cev.upper_mass_limit = cclist.UpperMassLimit;
aas.dcl_mass = cclist.MassAsArray;
aas.doubles = cclist.DoublesAsArray;
break;
case AnalysisMethod.Active:
INCCAnalysisParams.active_rec ac = (INCCAnalysisParams.active_rec)imd;
CopyCoefficients(coeff, ac.cev);
ac.cev.cal_curve_equation = CurveEquation;
ac.cev.lower_mass_limit = cclist.LowerMassLimit;
ac.cev.upper_mass_limit = cclist.UpperMassLimit;
ac.dcl_mass = cclist.MassAsArray;
ac.doubles = cclist.DoublesAsArray;
break;
}
imd.modified = true;
// ok save it now
N.App.DB.UpdateAnalysisMethod(sel, lam); // flush changes on internal map to the DB
MessageBox.Show(string.Format("Calibration data for analysis method {0} and material type {1} successfully stored in the database",
det.Id.DetectorId, Material),
"Coefficient File Ingester", MessageBoxButtons.OK);
}
internal static unsafe add_a_source_rec MoveAS(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.add_a_source_rec imr = (INCCAnalysisParams.add_a_source_rec)md;
add_a_source_rec m = new add_a_source_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.add_a_source_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.add_a_source_item_type);
m.ad_a = imr.cev.a;
m.ad_b = imr.cev.b;
m.ad_c = imr.cev.c;
m.ad_d = imr.cev.d;
m.add_a_source_equation = (byte)imr.cev.cal_curve_equation;
m.ad_covar_ab = imr.cev.covar(Coeff.a, Coeff.b);
m.ad_covar_ac = imr.cev.covar(Coeff.a, Coeff.c);
m.ad_covar_ad = imr.cev.covar(Coeff.a, Coeff.d);
m.ad_covar_bc = imr.cev.covar(Coeff.b, Coeff.c);
m.ad_covar_bd = imr.cev.covar(Coeff.b, Coeff.d);
m.ad_covar_cd = imr.cev.covar(Coeff.c, Coeff.d);
m.ad_var_a = imr.cev.var_a;
m.ad_var_b = imr.cev.var_b;
m.ad_var_c = imr.cev.var_c;
m.ad_var_d = imr.cev.var_d;
m.ad_sigma_x = imr.cev.sigma_x;
m.ad_upper_mass_limit = imr.cev.upper_mass_limit;
m.ad_lower_mass_limit = imr.cev.lower_mass_limit;
TransferUtils.CopyDbls(imr.dcl_mass, m.ad_dcl_mass);
TransferUtils.CopyDbls(imr.doubles, m.ad_doubles);
TransferUtils.CopyDbls(imr.position_dzero, m.ad_position_dzero);
m.ad_cf_a = imr.cf.a;
m.ad_cf_b = imr.cf.b;
m.ad_cf_c = imr.cf.c;
m.ad_cf_d = imr.cf.d;
m.ad_dzero_avg = imr.dzero_avg;
m.ad_num_runs = imr.num_runs;
m.ad_tm_dbls_rate_upper_limit = imr.tm_dbls_rate_upper_limit;
m.ad_tm_weighting_factor = imr.tm_weighting_factor;
m.ad_use_truncated_mult = imr.use_truncated_mult ? 1 : 0;
b = new byte[INCC.DATE_TIME_LENGTH];
a = imr.dzero_ref_date.ToString("yy.MM.dd").ToCharArray();
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.ad_dzero_ref_date);
return m;
}
internal static unsafe known_m_rec MoveKM(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.known_m_rec imr = (INCCAnalysisParams.known_m_rec)md;
known_m_rec m = new known_m_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.known_m_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.known_m_item_type);
m.km_b = imr.b;
m.km_c = imr.c;
m.km_sf_rate = imr.sf_rate;
m.km_sigma_x = imr.sigma_x;
m.km_upper_mass_limit = imr.upper_mass_limit;
m.km_lower_mass_limit = imr.lower_mass_limit;
m.km_vi1 = imr.vi1;
m.km_vi2 = imr.vi2;
m.km_vs1 = imr.vs1;
m.km_vs2 = imr.vs2;
return m;
}
/// <summary>
/// Imprint a new measurement with as much information as possible from a results_rec.
/// </summary>
/// <param name="rec">The results_rec with the measurement details</param>
/// <param name="meaId">Unique id for the measurement, from the results_rec fields</param>
/// <param name="logger">logger handle</param>
/// <returns>A new measurement</returns>
public Measurement(INCCResults.results_rec rec, MeasId meaId, LMLoggers.LognLM logger)
{
HVCalibrationParameters hv = NCC.IntegrationHelpers.GetCurrentHVCalibrationParams(rec.det);
MeasurementTuple mt = new MeasurementTuple(new DetectorList(rec.det), rec.tests, rec.norm, rec.bkg, rec.iso, rec.acq, hv);
this.mt = mt;
this.logger = logger;
mid = meaId;
InitMisc();
if (rec.det.ListMode)
{
AnalysisParams = NC.App.LMBD.CountingParameters(rec.det, applySRFromDetector: true);
if (meaId.MeasOption.IsListMode()) // pure List Mode, not INCC5
{
// for a list-mode-only measurement with a multiplicity analyzer the detector SR params must match at least one of the multiplicity analyzer SR params
NCC.IntegrationHelpers.ApplyVSRChangesToDefaultDetector(this);
}
else // it is an INCC5 analysis driven with LM data
{
// prepare or identify an active CA entry with matching CA gatewidth and FA, with remaining SR params as the detector
AnalysisParams.PrepareMatchingVSR(rec.det.MultiplicityParams);
}
}
else
{
// prepare analyzer params from detector SR params
AnalysisParams = NC.App.LMBD.CountingParameters(rec.det, applySRFromDetector: false);
if (!AnalysisParams.Exists(w => { return((w is Multiplicity) && (w as Multiplicity).Equals(rec.det.MultiplicityParams)); }))
{
AnalysisParams.Add(rec.det.MultiplicityParams);
}
}
// get the INCC5 analysis methods
INCCAnalysisState = new INCCAnalysisState();
INCCSelector sel = new INCCSelector(rec.acq.detector_id, rec.acq.item_type);
AnalysisMethods am;
bool found = NC.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out am);
if (found)
{
am.selector = sel; // gotta do this so that the equality operator is correct
INCCAnalysisState.Methods = am;
}
else
{
INCCAnalysisState.Methods = new AnalysisMethods(sel);
}
InitializeContext(clearCounterResults: true);
PrepareINCCResults();
// a list mode measurement may not have a multiplicity analyzer at all, create on results, copying the current values
if (CountingAnalysisResults.ContainsKey(rec.det.MultiplicityParams))
{
MultiplicityCountingRes mcr = (MultiplicityCountingRes)CountingAnalysisResults[rec.det.MultiplicityParams];
if (rec.mcr.AB.Unset)
{
SDTMultiplicityCalculator.SetAlphaBeta(rec.det.MultiplicityParams, rec.mcr); // works only if MaxBins is set
}
mcr.CopyFrom(rec.mcr); // copy the mcr results onto the first moskey entry
// the same results are copied to the full results structure
MeasOptionSelector mos = new MeasOptionSelector(MeasOption, rec.det.MultiplicityParams);
INCCResult result = INCCAnalysisState.Lookup(mos);
result.CopyFrom(rec.mcr);
}
Stratum = new Stratum(rec.st); // the stratum from the results rec
}
internal static unsafe collar_rec MoveCO(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.collar_combined_rec imr = (INCCAnalysisParams.collar_combined_rec)md;
collar_rec m = new collar_rec();
byte[] b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
char[] a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.collar_item_type);
m.col_a = imr.collar.cev.a;
m.col_b = imr.collar.cev.b;
m.col_c = imr.collar.cev.c;
m.col_d = imr.collar.cev.d;
m.collar_equation = (byte)imr.collar.cev.cal_curve_equation;
m.col_covar_ab = imr.collar.cev.covar(Coeff.a, Coeff.b);
m.col_covar_ac = imr.collar.cev.covar(Coeff.a, Coeff.c);
m.col_covar_ad = imr.collar.cev.covar(Coeff.a, Coeff.d);
m.col_covar_bc = imr.collar.cev.covar(Coeff.b, Coeff.c);
m.col_covar_bd = imr.collar.cev.covar(Coeff.b, Coeff.d);
m.col_covar_cd = imr.collar.cev.covar(Coeff.c, Coeff.d);
m.col_var_a = imr.collar.cev.var_a;
m.col_var_b = imr.collar.cev.var_b;
m.col_var_c = imr.collar.cev.var_c;
m.col_var_d = imr.collar.cev.var_d;
m.col_sigma_x = imr.collar.cev.sigma_x;
m.col_upper_mass_limit = imr.collar.cev.upper_mass_limit;
m.col_lower_mass_limit = imr.collar.cev.lower_mass_limit;
m.col_number_calib_rods = imr.collar.number_calib_rods;
m.col_sample_corr_fact = imr.collar.sample_corr_fact.v;
m.col_sample_corr_fact_err = imr.collar.sample_corr_fact.err;
m.col_u_mass_corr_fact_a = imr.collar.u_mass_corr_fact_a.v;
m.col_u_mass_corr_fact_a_err = imr.collar.u_mass_corr_fact_a.err;
m.col_u_mass_corr_fact_b = imr.collar.u_mass_corr_fact_b.v;
m.col_u_mass_corr_fact_b_err = imr.collar.u_mass_corr_fact_b.err;
m.collar_mode = (byte)(imr.collar.collar_mode ? 1 : 0);
byte[] bb = new byte[INCC.MAX_POISON_ROD_TYPES * INCC.MAX_ROD_TYPE_LENGTH];
int indx = 0;
for (int i = 0; i < INCC.MAX_POISON_ROD_TYPES; i++)
{
if (string.IsNullOrEmpty(imr.collar.poison_rod_type[i]))
{
char[] aa = imr.collar.poison_rod_type[i].ToCharArray(0, Math.Min(imr.collar.poison_rod_type[i].Length, INCC.MAX_ROD_TYPE_LENGTH));
Encoding.ASCII.GetBytes(aa, 0, aa.Length, bb, indx);
}
indx += 2;
}
TransferUtils.Copy(bb, 0, m.col_poison_rod_type, 0, INCC.MAX_POISON_ROD_TYPES * INCC.MAX_ROD_TYPE_LENGTH);
TransferUtils.CopyDbls(imr.collar.poison_absorption_fact, m.col_poison_absorption_fact);
CopyTuples(imr.collar.poison_rod_a, m.col_poison_rod_a, m.col_poison_rod_a_err, INCC.MAX_POISON_ROD_TYPES);
CopyTuples(imr.collar.poison_rod_b, m.col_poison_rod_b, m.col_poison_rod_b_err, INCC.MAX_POISON_ROD_TYPES);
CopyTuples(imr.collar.poison_rod_c, m.col_poison_rod_c, m.col_poison_rod_c_err, INCC.MAX_POISON_ROD_TYPES);
return m;
}
internal static unsafe de_mult_rec MoveDE(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.de_mult_rec imr = (INCCAnalysisParams.de_mult_rec)md;
de_mult_rec m = new de_mult_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.de_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.de_item_type);
m.de_inner_ring_efficiency = imr.inner_ring_efficiency;
m.de_outer_ring_efficiency = imr.outer_ring_efficiency;
TransferUtils.CopyDbls(imr.neutron_energy, m.de_neutron_energy);
TransferUtils.CopyDbls(imr.detector_efficiency, m.de_detector_efficiency);
TransferUtils.CopyDbls(imr.inner_outer_ring_ratio, m.de_inner_outer_ring_ratio);
TransferUtils.CopyDbls(imr.relative_fission, m.de_relative_fission);
return m;
}
public void Persist()
{
if (imd.modified)
{
if (ams == null) // HN No analysis methods existed.
{
ams = new AnalysisMethods();
ams.AddMethod(am, imd);
}
if (ams.HasMethod(am)) // if found, update the existing parameter values
{
INCCAnalysisParams.INCCMethodDescriptor c = ams.GetMethodParameters(am);
imd.CopyTo(c); // This a virtual so imd can be the primary type
}
else // add the new method params under the current method key
{
ams.AddMethod(am, imd);
}
INCCSelector sel = new INCCSelector(acq.detector_id, acq.item_type);
N.App.DB.UpdateAnalysisMethod(sel, ams); // flush changes on internal map to the DB
}
}
internal static unsafe truncated_mult_rec MoveTM(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.truncated_mult_rec imr = (INCCAnalysisParams.truncated_mult_rec)md;
truncated_mult_rec m = new truncated_mult_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.truncated_mult_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.truncated_mult_item_type);
m.tm_a = imr.a;
m.tm_b = imr.b;
m.tm_known_eff = (byte)(imr.known_eff ? 1 : 0);
m.tm_solve_eff = (byte)(imr.solve_eff ? 1 : 0);
return m;
}
private void OKBtn_Click(object sender, EventArgs e)
{
if (modified)
{
AnalysisMethod am = AnalysisMethod.CalibrationCurve;
INCCAnalysisParams.INCCMethodDescriptor c = ams.GetMethodParameters(am);
((INCCAnalysisParams.cal_curve_rec)c).percent_u235 = percent;
INCCSelector sel = new INCCSelector(acq.detector_id, acq.item_type);
NC.App.DB.UpdateAnalysisMethod(sel, ams); // flush changes on internal map to the DB
}
DialogResult = System.Windows.Forms.DialogResult.OK;
Close();
}
void ApplyCoefficients(INCCAnalysisParams.CurveEquationVals coeff, CalibrationCurveList cclist)
{
INCCSelector sel = new INCCSelector(det.Id.DetectorId, Material);
AnalysisMethods lam;
bool found = N.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out lam);
if (!found)
{
lam = new AnalysisMethods(sel);
}
if (!lam.HasMethod(AnalysisMethod)) // create it from scratch here ????
{
MessageBox.Show(string.Format("{0} method not specified for detector {1} and material {2}",
AnalysisMethod.FullName(), det.Id.DetectorId, Material),
"Coefficient File Ingester", MessageBoxButtons.OK);
return;
}
INCCAnalysisParams.INCCMethodDescriptor imd = lam.GetMethodParameters(AnalysisMethod);
switch (AnalysisMethod)
{
case AnalysisMethod.CalibrationCurve:
INCCAnalysisParams.cal_curve_rec c = (INCCAnalysisParams.cal_curve_rec)imd;
CopyCoefficients(coeff, c.cev);
c.cev.cal_curve_equation = CurveEquation;
c.cev.lower_mass_limit = cclist.LowerMassLimit;
c.cev.upper_mass_limit = cclist.UpperMassLimit;
c.dcl_mass = cclist.MassAsArray;
c.doubles = cclist.DoublesAsArray;
break;
case AnalysisMethod.KnownA:
INCCAnalysisParams.known_alpha_rec ka = (INCCAnalysisParams.known_alpha_rec)imd;
CopyCoefficients(coeff, ka.cev);
ka.cev.cal_curve_equation = CurveEquation;
ka.cev.lower_mass_limit = cclist.LowerMassLimit;
ka.cev.upper_mass_limit = cclist.UpperMassLimit;
ka.dcl_mass = cclist.MassAsArray;
ka.doubles = cclist.DoublesAsArray;
break;
case AnalysisMethod.AddASource:
INCCAnalysisParams.add_a_source_rec aas = (INCCAnalysisParams.add_a_source_rec)imd;
CopyCoefficients(coeff, aas.cev);
aas.cev.cal_curve_equation = CurveEquation;
aas.cev.lower_mass_limit = cclist.LowerMassLimit;
aas.cev.upper_mass_limit = cclist.UpperMassLimit;
aas.dcl_mass = cclist.MassAsArray;
aas.doubles = cclist.DoublesAsArray;
break;
case AnalysisMethod.Active:
INCCAnalysisParams.active_rec ac = (INCCAnalysisParams.active_rec)imd;
CopyCoefficients(coeff, ac.cev);
ac.cev.cal_curve_equation = CurveEquation;
ac.cev.lower_mass_limit = cclist.LowerMassLimit;
ac.cev.upper_mass_limit = cclist.UpperMassLimit;
ac.dcl_mass = cclist.MassAsArray;
ac.doubles = cclist.DoublesAsArray;
break;
}
imd.modified = true;
// ok save it now
N.App.DB.UpdateAnalysisMethod(sel, lam); // flush changes on internal map to the DB
MessageBox.Show(string.Format("Calibration data for analysis method {0} and material type {1} successfully stored in the database",
det.Id.DetectorId, Material),
"Coefficient File Ingester", MessageBoxButtons.OK);
}
/// <summary>
/// Get specific parameter sets for the given detector, material type pair.
/// Returns default values if database entry not found
/// </summary>
/// <param name="detname"></param>
/// <param name="mat"></param>
/// <param name="db"></param>
public void IngestAnalysisMethodSpecificsFromDB(INCCSelector sel, AnalysisMethods ams, DB.AnalysisMethodSpecifiers db)
{
foreach (AnalysisMethod am in System.Enum.GetValues(typeof(AnalysisMethod)))
{
if (!ams.choices[(int)am])
{
continue;
}
if (!(am > AnalysisMethod.None && am <= AnalysisMethod.TruncatedMultiplicity && (am != AnalysisMethod.INCCNone)))
{
if (!am.IsNone())
{
NC.App.Pest.logger.TraceEvent(LogLevels.Warning, 34061, "Skipping DB ingest of {0} {1} calib params", sel, am);
}
continue;
}
string current = String.Format("{0} {1} parameters", sel, am.FullName());
int logid = 34170 + (int)am;
LogLevels lvl = LogLevels.Verbose;
DataRow dr;
switch (am)
{
case AnalysisMethod.KnownA:
INCCAnalysisParams.known_alpha_rec ks = new INCCAnalysisParams.known_alpha_rec();
dr = db.Get(sel.detectorid, sel.material, "known_alpha_rec");
if (dr != null)
{
ks.rho_zero = DB.Utils.DBDouble(dr["rho_zero"]);
ks.alpha_wt = DB.Utils.DBDouble(dr["alpha_wt"]);
ks.k = DB.Utils.DBDouble(dr["k"]);
ks.cev.a = DB.Utils.DBDouble(dr["a"]);
ks.cev.b = DB.Utils.DBDouble(dr["b"]);
ks.cev.var_a = DB.Utils.DBDouble(dr["var_a"]);
ks.cev.var_b = DB.Utils.DBDouble(dr["var_b"]);
ks.cev.setcovar(Coeff.a, Coeff.b, DB.Utils.DBDouble(dr["covar_ab"]));
ks.cev.sigma_x = DB.Utils.DBDouble(dr["sigma_x"]);
ks.known_alpha_type = (INCCAnalysisParams.KnownAlphaVariant)(DB.Utils.DBInt32(dr["known_alpha_type"]));
ks.ring_ratio.cal_curve_equation = (INCCAnalysisParams.CurveEquation)(DB.Utils.DBInt32(dr["ring_ratio_equation"]));
ks.ring_ratio.a = DB.Utils.DBDouble(dr["ring_ratio_a"]);
ks.ring_ratio.b = DB.Utils.DBDouble(dr["ring_ratio_b"]);
ks.ring_ratio.c = DB.Utils.DBDouble(dr["ring_ratio_c"]);
ks.ring_ratio.d = DB.Utils.DBDouble(dr["ring_ratio_d"]);
ks.dcl_mass = DB.Utils.ReifyDoubles((string)dr["dcl_mass"]);
ks.doubles = DB.Utils.ReifyDoubles((string)dr["doubles"]);
ks.heavy_metal_reference = DB.Utils.DBDouble(dr["heavy_metal_reference"]);
ks.heavy_metal_corr_factor = DB.Utils.DBDouble(dr["heavy_metal_corr_factor"]);
ks.cev.upper_mass_limit = DB.Utils.DBDouble(dr["upper_mass_limit"]);
ks.cev.lower_mass_limit = DB.Utils.DBDouble(dr["lower_mass_limit"]);
}
else
{
lvl = LogLevels.Info;
}
ams.AddMethod(am, ks);
break;
case AnalysisMethod.CalibrationCurve:
INCCAnalysisParams.cal_curve_rec cs = new INCCAnalysisParams.cal_curve_rec();
dr = db.Get(sel.detectorid, sel.material, "cal_curve_rec");
if (dr != null)
{
CalCurveDBSnock(cs.cev, dr);
cs.CalCurveType = (INCCAnalysisParams.CalCurveType)DB.Utils.DBInt32(dr["cal_curve_type"]);
cs.dcl_mass = DB.Utils.ReifyDoubles((string)dr["dcl_mass"]);
cs.doubles = DB.Utils.ReifyDoubles((string)dr["doubles"]);
cs.percent_u235 = DB.Utils.DBDouble(dr["percent_u235"]);
cs.heavy_metal_reference = DB.Utils.DBDouble(dr["heavy_metal_reference"]);
cs.heavy_metal_corr_factor = DB.Utils.DBDouble(dr["heavy_metal_corr_factor"]);
}
else
{
lvl = LogLevels.Info;
}
ams.AddMethod(am, cs);
break;
case AnalysisMethod.KnownM:
INCCAnalysisParams.known_m_rec ms = new INCCAnalysisParams.known_m_rec();
dr = db.Get(sel.detectorid, sel.material, "known_m_rec");
if (dr != null)
{
ms.sf_rate = DB.Utils.DBDouble(dr["sf_rate"]);
ms.vs1 = DB.Utils.DBDouble(dr["vs1"]);
ms.vs2 = DB.Utils.DBDouble(dr["vs2"]);
ms.vi1 = DB.Utils.DBDouble(dr["vi1"]);
ms.vi2 = DB.Utils.DBDouble(dr["vi2"]);
ms.b = DB.Utils.DBDouble(dr["b"]);
ms.c = DB.Utils.DBDouble(dr["c"]);
ms.sigma_x = DB.Utils.DBDouble(dr["sigma_x"]);
ms.lower_mass_limit = DB.Utils.DBDouble(dr["lower_mass_limit"]);
ms.upper_mass_limit = DB.Utils.DBDouble(dr["upper_mass_limit"]);
}
else
{
lvl = LogLevels.Info;
}
ams.AddMethod(am, ms);
break;
case AnalysisMethod.Multiplicity:
INCCAnalysisParams.multiplicity_rec mu = new INCCAnalysisParams.multiplicity_rec();
dr = db.Get(sel.detectorid, sel.material, "multiplicity_rec");
if (dr != null)
{
mu.solve_efficiency = (INCCAnalysisParams.MultChoice)DB.Utils.DBInt32(dr["solve_efficiency"]);
mu.sf_rate = DB.Utils.DBDouble(dr["sf_rate"]);
mu.vs1 = DB.Utils.DBDouble(dr["vs1"]);
mu.vs2 = DB.Utils.DBDouble(dr["vs2"]);
mu.vs3 = DB.Utils.DBDouble(dr["vs3"]);
mu.vi1 = DB.Utils.DBDouble(dr["vi1"]);
mu.vi2 = DB.Utils.DBDouble(dr["vi2"]);
mu.vi3 = DB.Utils.DBDouble(dr["vi3"]);
mu.a = DB.Utils.DBDouble(dr["a"]);
mu.b = DB.Utils.DBDouble(dr["b"]);
mu.c = DB.Utils.DBDouble(dr["c"]);
mu.sigma_x = DB.Utils.DBDouble(dr["sigma_x"]);
mu.alpha_weight = DB.Utils.DBDouble(dr["alpha_weight"]);
mu.multEffCorFactor = DB.Utils.DBDouble(dr["eff_cor"]);
}
else
{
lvl = LogLevels.Info;
}
ams.AddMethod(am, mu);
break;
case AnalysisMethod.TruncatedMultiplicity:
INCCAnalysisParams.truncated_mult_rec tm = new INCCAnalysisParams.truncated_mult_rec();
dr = db.Get(sel.detectorid, sel.material, "truncated_mult_rec");
if (dr != null)
{
tm.known_eff = DB.Utils.DBBool(dr["known_eff"]);
tm.solve_eff = DB.Utils.DBBool(dr["vs1"]);
tm.a = DB.Utils.DBDouble(dr["a"]);
tm.b = DB.Utils.DBDouble(dr["b"]);
}
else
{
lvl = LogLevels.Info;
}
ams.AddMethod(am, tm);
break;
case AnalysisMethod.CuriumRatio:
INCCAnalysisParams.curium_ratio_rec cm = new INCCAnalysisParams.curium_ratio_rec();
dr = db.Get(sel.detectorid, sel.material, "curium_ratio_rec");
if (dr != null)
{
cm.curium_ratio_type = (INCCAnalysisParams.CuriumRatioVariant)DB.Utils.DBInt32(dr["curium_ratio_type"]);
CalCurveDBSnock(cm.cev, dr);
}
else
{
lvl = LogLevels.Info;
}
ams.AddMethod(am, cm);
break;
case AnalysisMethod.Active:
INCCAnalysisParams.active_rec ar = new INCCAnalysisParams.active_rec();
dr = db.Get(sel.detectorid, sel.material, "active_rec");
if (dr != null)
{
CalCurveDBSnock(ar.cev, dr);
ar.dcl_mass = DB.Utils.ReifyDoubles((string)dr["dcl_mass"]);
ar.doubles = DB.Utils.ReifyDoubles((string)dr["doubles"]);
}
else
{
lvl = LogLevels.Warning;
}
ams.AddMethod(am, ar);
break;
case AnalysisMethod.AddASource:
INCCAnalysisParams.add_a_source_rec aas = new INCCAnalysisParams.add_a_source_rec();
dr = db.Get(sel.detectorid, sel.material, "add_a_source_rec");
if (dr != null)
{
CalCurveDBSnock(aas.cev, dr);
aas.dcl_mass = DB.Utils.ReifyDoubles((string)dr["dcl_mass"]);
aas.doubles = DB.Utils.ReifyDoubles((string)dr["doubles"]);
aas.cf.a = DB.Utils.DBDouble(dr["cf_a"]);
aas.cf.b = DB.Utils.DBDouble(dr["cf_b"]);
aas.cf.c = DB.Utils.DBDouble(dr["cf_c"]);
aas.cf.d = DB.Utils.DBDouble(dr["cf_d"]);
aas.dzero_avg = DB.Utils.DBDouble(dr["dzero_avg"]);
aas.num_runs = DB.Utils.DBUInt16(dr["num_runs"]);
aas.position_dzero = DB.Utils.ReifyDoubles((string)dr["position_dzero"]);
aas.dzero_ref_date = DB.Utils.DBDateTime(dr["dzero_ref_date"]);
aas.use_truncated_mult = DB.Utils.DBBool(dr["use_truncated_mult"]);
aas.tm_dbls_rate_upper_limit = DB.Utils.DBDouble(dr["tm_dbls_rate_upper_limit"]);
aas.tm_weighting_factor = DB.Utils.DBDouble(dr["tm_weighting_factor"]);
}
else
{
lvl = LogLevels.Info;
}
ams.AddMethod(am, aas);
break;
case AnalysisMethod.ActiveMultiplicity:
INCCAnalysisParams.active_mult_rec amr = new INCCAnalysisParams.active_mult_rec();
dr = db.Get(sel.detectorid, sel.material, "active_mult_rec");
if (dr != null)
{
amr.vf1 = DB.Utils.DBDouble(dr["vf1"]);
amr.vf2 = DB.Utils.DBDouble(dr["vf2"]);
amr.vf3 = DB.Utils.DBDouble(dr["vf3"]);
amr.vt1 = DB.Utils.DBDouble(dr["vt1"]);
amr.vt2 = DB.Utils.DBDouble(dr["vt2"]);
amr.vt3 = DB.Utils.DBDouble(dr["vt3"]);
}
else
{
lvl = LogLevels.Info;
}
ams.AddMethod(am, amr);
break;
case AnalysisMethod.ActivePassive:
INCCAnalysisParams.active_passive_rec acp = new INCCAnalysisParams.active_passive_rec();
dr = db.Get(sel.detectorid, sel.material, "active_passive_rec");
if (dr != null)
{
CalCurveDBSnock(acp.cev, dr);
}
else
{
lvl = LogLevels.Info;
}
ams.AddMethod(am, acp);
break;
case AnalysisMethod.Collar:
INCCAnalysisParams.collar_rec cr = new INCCAnalysisParams.collar_rec();
dr = db.Get(sel.detectorid, sel.material, "collar_rec");
if (dr != null)
{
CalCurveDBSnock(cr.cev, dr);
cr.collar_mode = DB.Utils.DBBool(dr["collar_mode"]);
cr.number_calib_rods = DB.Utils.DBInt32(dr["number_calib_rods"]);
cr.sample_corr_fact.v = DB.Utils.DBDouble(dr["sample_corr_fact"]);
cr.sample_corr_fact.err = DB.Utils.DBDouble(dr["sample_corr_fact_err"]);
cr.u_mass_corr_fact_a.v = DB.Utils.DBDouble(dr["u_mass_corr_fact_a"]);
cr.u_mass_corr_fact_a.err = DB.Utils.DBDouble(dr["u_mass_corr_fact_a_err"]);
cr.u_mass_corr_fact_b.v = DB.Utils.DBDouble(dr["u_mass_corr_fact_b"]);
cr.u_mass_corr_fact_b.err = DB.Utils.DBDouble(dr["u_mass_corr_fact_b_err"]);
cr.poison_absorption_fact = DB.Utils.ReifyDoubles((string)dr["poison_absorption_fact"]);
cr.poison_rod_type = DB.Utils.ReifyStrings((string)dr["poison_rod_type"]);
cr.poison_rod_a = TupleArraySlurp(ref cr.poison_rod_a, "poison_rod_a", dr);
cr.poison_rod_b = TupleArraySlurp(ref cr.poison_rod_b, "poison_rod_b", dr);
cr.poison_rod_c = TupleArraySlurp(ref cr.poison_rod_c, "poison_rod_c", dr);
}
else
{
lvl = LogLevels.Info;
}
ams.AddMethod(am, cr);
break;
default:
lvl = LogLevels.Error; logid = 34181; current = "Choosing to not construct" + current;
break;
}
switch (lvl)
{
case LogLevels.Info:
current = "Using default for " + current;
lvl = LogLevels.Verbose;
break;
case LogLevels.Verbose:
current = "Retrieved for " + current;
break;
default:
break;
}
NC.App.Pest.logger.TraceEvent(lvl, logid, current);
} // for
}
public void UpdateAnalysisMethod(INCCSelector sel, AnalysisMethods ams)
{
DB.AnalysisMethodSpecifiers db = new DB.AnalysisMethodSpecifiers();
if (ams.modified)
{
UpdateAnalysisMethods(sel, ams, db);
}
UpdateAnalysisMethodSpecifics(sel.detectorid, sel.material,db);
}
public void UpdateAnalysisMethods(INCCSelector sel, AnalysisMethods am, DB.AnalysisMethodSpecifiers db = null)
{
if (db == null)
db = new DB.AnalysisMethodSpecifiers();
DB.ElementList saParams;
saParams = am.ToDBElementList();
if (!db.Update(sel.detectorid, sel.material, saParams)) // am not there, so add it
{
NC.App.Pest.logger.TraceEvent(LogLevels.Verbose, 34027, "Failed to update analysis method spec for " + sel.ToString());
}
else
{
NC.App.Pest.logger.TraceEvent(LogLevels.Verbose, 34026, "Updated/created analysis method spec for " + sel.ToString());
}
am.modified = false;
}
internal static unsafe collar_detector_rec MoveCD(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.collar_combined_rec imr = (INCCAnalysisParams.collar_combined_rec)md;
collar_detector_rec m = new collar_detector_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.collar_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.collar_detector_item_type);
m.collar_detector_mode = (byte)(imr.collar_det.collar_mode ? 1 : 0);
b = new byte[INCC.DATE_TIME_LENGTH];
a = imr.collar_det.reference_date.ToString("yy.MM.dd").ToCharArray();
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.col_reference_date);
m.col_relative_doubles_rate = imr.collar_det.relative_doubles_rate;
return m;
}
public static unsafe List<INCCInitialDataCalibrationFile> CalibFromDetectors(List<Detector> dets)
{
List<INCCInitialDataCalibrationFile> list = new List<INCCInitialDataCalibrationFile>();
foreach(Detector det in dets)
{
INCCInitialDataCalibrationFile idcf = new INCCInitialDataCalibrationFile(NC.App.Loggers.Logger(LMLoggers.AppSection.Control), null);
idcf.Name = det.Id.DetectorId;
foreach (INCCDB.Descriptor desc in NC.App.DB.Materials.GetList())
{
INCCSelector se = new INCCSelector(det.Id.DetectorId, desc.Name);
if (!NC.App.DB.DetectorMaterialAnalysisMethods.ContainsKey(se))
continue;
// do the method choice rec first
DetectorMaterialMethod dmm = new DetectorMaterialMethod(se.material, se.detectorid, INCC.METHOD_NONE);
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveAMR(se));
// then do each method rec
AnalysisMethods ams = NC.App.DB.DetectorMaterialAnalysisMethods[se];
IEnumerator iter = ams.GetMethodEnumerator();
while (iter.MoveNext())
{
Tuple<AnalysisMethod, INCCAnalysisParams.INCCMethodDescriptor> md = (Tuple<AnalysisMethod, INCCAnalysisParams.INCCMethodDescriptor>)iter.Current;
dmm = new DetectorMaterialMethod(se.material, se.detectorid, (byte)NewTypeToOldMethodId(md.Item1));
switch(md.Item1)
{
case AnalysisMethod.KnownA:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveKA(se, md.Item2));
break;
case AnalysisMethod.CalibrationCurve:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveCC(se, md.Item2));
break;
case AnalysisMethod.KnownM:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveKM(se, md.Item2));
break;
case AnalysisMethod.Multiplicity:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveMult(se, md.Item2));
break;
case AnalysisMethod.TruncatedMultiplicity:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveTM(se, md.Item2));
break;
case AnalysisMethod.AddASource:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveAS(se, md.Item2));
break;
case AnalysisMethod.CuriumRatio:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveCR(se, md.Item2));
break;
case AnalysisMethod.Active:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveCA(se, md.Item2));
break;
case AnalysisMethod.ActivePassive:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveAP(se, md.Item2));
break;
case AnalysisMethod.ActiveMultiplicity:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveAM(se, md.Item2));
break;
case AnalysisMethod.DUAL_ENERGY_MULT_SAVE_RESTORE:
idcf.DetectorMaterialMethodParameters.Add(dmm, Calib5.MoveDE(se, md.Item2));
break;
case AnalysisMethod.Collar:
try
{
idcf.DetectorMaterialMethodParameters.
Add(new DetectorMaterialMethod(se.material, se.detectorid, INCC.COLLAR_DETECTOR_SAVE_RESTORE), Calib5.MoveCD(se, md.Item2));
idcf.DetectorMaterialMethodParameters.
Add(new DetectorMaterialMethod(se.material, se.detectorid, INCC.COLLAR_SAVE_RESTORE), Calib5.MoveCO(se, md.Item2));
idcf.DetectorMaterialMethodParameters.
Add(new DetectorMaterialMethod(se.material, se.detectorid, INCC.COLLAR_K5_SAVE_RESTORE), Calib5.MoveCK(se, md.Item2));
}
catch (Exception e)
{
NC.App.Loggers.Logger(LMLoggers.AppSection.Control).TraceEvent(LogLevels.Warning, 34102, "Collar xfer processing error {0} {1}", md.Item1.FullName(), e.Message);
}
break;
case AnalysisMethod.COLLAR_SAVE_RESTORE:
case AnalysisMethod.COLLAR_DETECTOR_SAVE_RESTORE:
case AnalysisMethod.COLLAR_K5_SAVE_RESTORE:
NC.App.Loggers.Logger(LMLoggers.AppSection.Control).TraceEvent(LogLevels.Verbose, 34100, "Got '{0}' ", md.Item1.FullName());
break;
case AnalysisMethod.INCCNone:
break;
default:
break;
}
}
}
list.Add(idcf);
}
return list;
}
internal static unsafe collar_k5_rec MoveCK(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.collar_combined_rec imr = (INCCAnalysisParams.collar_combined_rec)md;
collar_k5_rec m = new collar_k5_rec();
byte[] b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
char[] a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.collar_k5_item_type);
CopyTuples(imr.k5.k5, m.collar_k5, m.collar_k5_err, INCC.MAX_COLLAR_K5_PARAMETERS);
TransferUtils.CopyBoolsToInts(imr.k5.k5_checkbox, m.collar_k5_checkbox);
m.collar_k5_mode = (byte)(imr.k5.k5_mode ? 1 : 0);
byte[] bb = new byte[INCC.MAX_COLLAR_K5_PARAMETERS * INCC.MAX_K5_LABEL_LENGTH];
int indx = 0;
for (int i = 0; i < INCC.MAX_COLLAR_K5_PARAMETERS; i++)
{
char[] aa = imr.k5.k5_label[i].ToCharArray(0, Math.Min(imr.k5.k5_label[i].Length, INCC.MAX_K5_LABEL_LENGTH));
Encoding.ASCII.GetBytes(aa, 0, aa.Length, bb, indx);
indx += INCC.MAX_K5_LABEL_LENGTH;
}
TransferUtils.Copy(bb, 0, m.collar_k5_label, 0, INCC.MAX_COLLAR_K5_PARAMETERS * INCC.MAX_K5_LABEL_LENGTH);
return m;
}
/// <summary>
/// Get specific parameter sets for the given detector, material type pair.
/// Returns default values if database entry not found
/// </summary>
/// <param name="detname"></param>
/// <param name="mat"></param>
/// <param name="db"></param>
public void IngestAnalysisMethodSpecificsFromDB(INCCSelector sel, AnalysisMethods ams, DB.AnalysisMethodSpecifiers db)
{
foreach (AnalysisMethod am in System.Enum.GetValues(typeof(AnalysisMethod)))
{
if (!ams.choices[(int)am])
continue;
if (!(am > AnalysisMethod.None && am <= AnalysisMethod.TruncatedMultiplicity && (am != AnalysisMethod.INCCNone)))
{
if (!am.IsNone())
NC.App.Pest.logger.TraceEvent(LogLevels.Warning, 34061, "Skipping DB ingest of {0} {1} calib params", sel, am);
continue;
}
string current = String.Format("{0} {1} parameters", sel, am.FullName());
int logid = 34170 + (int)am;
LogLevels lvl = LogLevels.Verbose;
DataRow dr;
switch (am)
{
case AnalysisMethod.KnownA:
INCCAnalysisParams.known_alpha_rec ks = new INCCAnalysisParams.known_alpha_rec();
dr = db.Get(sel.detectorid, sel.material, "known_alpha_rec");
if (dr != null)
{
ks.rho_zero = DB.Utils.DBDouble(dr["rho_zero"]);
ks.alpha_wt = DB.Utils.DBDouble(dr["alpha_wt"]);
ks.k = DB.Utils.DBDouble(dr["k"]);
ks.cev.a = DB.Utils.DBDouble(dr["a"]);
ks.cev.b = DB.Utils.DBDouble(dr["b"]);
ks.cev.var_a = DB.Utils.DBDouble(dr["var_a"]);
ks.cev.var_b = DB.Utils.DBDouble(dr["var_b"]);
ks.cev.setcovar(Coeff.a, Coeff.b, DB.Utils.DBDouble(dr["covar_ab"]));
ks.cev.sigma_x = DB.Utils.DBDouble(dr["sigma_x"]);
ks.known_alpha_type = (INCCAnalysisParams.KnownAlphaVariant)(DB.Utils.DBInt32(dr["known_alpha_type"]));
ks.ring_ratio.cal_curve_equation = (INCCAnalysisParams.CurveEquation)(DB.Utils.DBInt32(dr["ring_ratio_equation"]));
ks.ring_ratio.a = DB.Utils.DBDouble(dr["ring_ratio_a"]);
ks.ring_ratio.b = DB.Utils.DBDouble(dr["ring_ratio_b"]);
ks.ring_ratio.c = DB.Utils.DBDouble(dr["ring_ratio_c"]);
ks.ring_ratio.d = DB.Utils.DBDouble(dr["ring_ratio_d"]);
ks.dcl_mass = DB.Utils.ReifyDoubles((string)dr["dcl_mass"]);
ks.doubles = DB.Utils.ReifyDoubles((string)dr["doubles"]);
ks.heavy_metal_reference = DB.Utils.DBDouble(dr["heavy_metal_reference"]);
ks.heavy_metal_corr_factor = DB.Utils.DBDouble(dr["heavy_metal_corr_factor"]);
ks.cev.upper_mass_limit = DB.Utils.DBDouble(dr["upper_mass_limit"]);
ks.cev.lower_mass_limit = DB.Utils.DBDouble(dr["lower_mass_limit"]);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, ks);
break;
case AnalysisMethod.CalibrationCurve:
INCCAnalysisParams.cal_curve_rec cs = new INCCAnalysisParams.cal_curve_rec();
dr = db.Get(sel.detectorid, sel.material, "cal_curve_rec");
if (dr != null)
{
CalCurveDBSnock(cs.cev, dr);
cs.CalCurveType = (INCCAnalysisParams.CalCurveType)DB.Utils.DBInt32(dr["cal_curve_type"]);
cs.dcl_mass = DB.Utils.ReifyDoubles((string)dr["dcl_mass"]);
cs.doubles = DB.Utils.ReifyDoubles((string)dr["doubles"]);
cs.percent_u235 = DB.Utils.DBDouble(dr["percent_u235"]);
cs.heavy_metal_reference = DB.Utils.DBDouble(dr["heavy_metal_reference"]);
cs.heavy_metal_corr_factor = DB.Utils.DBDouble(dr["heavy_metal_corr_factor"]);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, cs);
break;
case AnalysisMethod.KnownM:
INCCAnalysisParams.known_m_rec ms = new INCCAnalysisParams.known_m_rec();
dr = db.Get(sel.detectorid, sel.material, "known_m_rec");
if (dr != null)
{
ms.sf_rate = DB.Utils.DBDouble(dr["sf_rate"]);
ms.vs1 = DB.Utils.DBDouble(dr["vs1"]);
ms.vs2 = DB.Utils.DBDouble(dr["vs2"]);
ms.vi1 = DB.Utils.DBDouble(dr["vi1"]);
ms.vi2 = DB.Utils.DBDouble(dr["vi2"]);
ms.b = DB.Utils.DBDouble(dr["b"]);
ms.c = DB.Utils.DBDouble(dr["c"]);
ms.sigma_x = DB.Utils.DBDouble(dr["sigma_x"]);
ms.lower_mass_limit = DB.Utils.DBDouble(dr["lower_mass_limit"]);
ms.upper_mass_limit = DB.Utils.DBDouble(dr["upper_mass_limit"]);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, ms);
break;
case AnalysisMethod.Multiplicity:
INCCAnalysisParams.multiplicity_rec mu = new INCCAnalysisParams.multiplicity_rec();
dr = db.Get(sel.detectorid, sel.material, "multiplicity_rec");
if (dr != null)
{
mu.solve_efficiency = (INCCAnalysisParams.MultChoice)DB.Utils.DBInt32(dr["solve_efficiency"]);
mu.sf_rate = DB.Utils.DBDouble(dr["sf_rate"]);
mu.vs1 = DB.Utils.DBDouble(dr["vs1"]);
mu.vs2 = DB.Utils.DBDouble(dr["vs2"]);
mu.vs3 = DB.Utils.DBDouble(dr["vs3"]);
mu.vi1 = DB.Utils.DBDouble(dr["vi1"]);
mu.vi2 = DB.Utils.DBDouble(dr["vi2"]);
mu.vi3 = DB.Utils.DBDouble(dr["vi3"]);
mu.a = DB.Utils.DBDouble(dr["a"]);
mu.b = DB.Utils.DBDouble(dr["b"]);
mu.c = DB.Utils.DBDouble(dr["c"]);
mu.sigma_x = DB.Utils.DBDouble(dr["sigma_x"]);
mu.alpha_weight = DB.Utils.DBDouble(dr["alpha_weight"]);
mu.multEffCorFactor = DB.Utils.DBDouble(dr["eff_cor"]);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, mu);
break;
case AnalysisMethod.TruncatedMultiplicity:
INCCAnalysisParams.truncated_mult_rec tm = new INCCAnalysisParams.truncated_mult_rec();
dr = db.Get(sel.detectorid, sel.material, "truncated_mult_rec");
if (dr != null)
{
tm.known_eff = DB.Utils.DBBool(dr["known_eff"]);
tm.solve_eff = DB.Utils.DBBool(dr["vs1"]);
tm.a = DB.Utils.DBDouble(dr["a"]);
tm.b = DB.Utils.DBDouble(dr["b"]);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, tm);
break;
case AnalysisMethod.CuriumRatio:
INCCAnalysisParams.curium_ratio_rec cm = new INCCAnalysisParams.curium_ratio_rec();
dr = db.Get(sel.detectorid, sel.material, "curium_ratio_rec");
if (dr != null)
{
cm.curium_ratio_type = (INCCAnalysisParams.CuriumRatioVariant)DB.Utils.DBInt32(dr["curium_ratio_type"]);
CalCurveDBSnock(cm.cev, dr);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, cm);
break;
case AnalysisMethod.Active:
INCCAnalysisParams.active_rec ar = new INCCAnalysisParams.active_rec();
dr = db.Get(sel.detectorid, sel.material, "active_rec");
if (dr != null)
{
CalCurveDBSnock(ar.cev, dr);
ar.dcl_mass = DB.Utils.ReifyDoubles((string)dr["dcl_mass"]);
ar.doubles = DB.Utils.ReifyDoubles((string)dr["doubles"]);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, ar);
break;
case AnalysisMethod.AddASource:
INCCAnalysisParams.add_a_source_rec aas = new INCCAnalysisParams.add_a_source_rec();
dr = db.Get(sel.detectorid, sel.material, "add_a_source_rec");
if (dr != null)
{
CalCurveDBSnock(aas.cev, dr);
aas.dcl_mass = DB.Utils.ReifyDoubles((string)dr["dcl_mass"]);
aas.doubles = DB.Utils.ReifyDoubles((string)dr["doubles"]);
aas.cf.a = DB.Utils.DBDouble(dr["cf_a"]);
aas.cf.b = DB.Utils.DBDouble(dr["cf_b"]);
aas.cf.c = DB.Utils.DBDouble(dr["cf_c"]);
aas.cf.d = DB.Utils.DBDouble(dr["cf_d"]);
aas.dzero_avg = DB.Utils.DBDouble(dr["dzero_avg"]);
aas.num_runs = DB.Utils.DBUInt16(dr["num_runs"]);
aas.position_dzero = DB.Utils.ReifyDoubles((string)dr["position_dzero"]);
aas.dzero_ref_date = DB.Utils.DBDateTime(dr["dzero_ref_date"]);
aas.use_truncated_mult = DB.Utils.DBBool(dr["use_truncated_mult"]);
aas.tm_dbls_rate_upper_limit = DB.Utils.DBDouble(dr["tm_dbls_rate_upper_limit"]);
aas.tm_weighting_factor = DB.Utils.DBDouble(dr["tm_weighting_factor"]);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, aas);
break;
case AnalysisMethod.ActiveMultiplicity:
INCCAnalysisParams.active_mult_rec amr = new INCCAnalysisParams.active_mult_rec();
dr = db.Get(sel.detectorid, sel.material, "active_mult_rec");
if (dr != null)
{
amr.vf1 = DB.Utils.DBDouble(dr["vf1"]);
amr.vf2 = DB.Utils.DBDouble(dr["vf2"]);
amr.vf3 = DB.Utils.DBDouble(dr["vf3"]);
amr.vt1 = DB.Utils.DBDouble(dr["vt1"]);
amr.vt2 = DB.Utils.DBDouble(dr["vt2"]);
amr.vt3 = DB.Utils.DBDouble(dr["vt3"]);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, amr);
break;
case AnalysisMethod.ActivePassive:
INCCAnalysisParams.active_passive_rec acp = new INCCAnalysisParams.active_passive_rec();
dr = db.Get(sel.detectorid, sel.material, "active_passive_rec");
if (dr != null)
{
CalCurveDBSnock(acp.cev, dr);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, acp);
break;
case AnalysisMethod.Collar:
INCCAnalysisParams.collar_combined_rec cr = new INCCAnalysisParams.collar_combined_rec();
dr = db.Get(sel.detectorid, sel.material, "collar_detector_rec");
if (dr != null)
{
cr.collar_det.collar_mode = DB.Utils.DBBool(dr["collar_detector_mode"]);
cr.collar_det.reference_date = DB.Utils.DBDateTime(dr["reference_date"]);
cr.collar_det.relative_doubles_rate = DB.Utils.DBDouble(dr["relative_doubles_rate"]);
}
else
lvl = LogLevels.Info;
dr = db.Get(sel.detectorid, sel.material, "collar_rec");
if (dr != null)
{
CalCurveDBSnock(cr.collar.cev, dr);
cr.collar.collar_mode = DB.Utils.DBBool(dr["collar_mode"]);
cr.collar.number_calib_rods = DB.Utils.DBInt32(dr["number_calib_rods"]);
cr.collar.sample_corr_fact.v = DB.Utils.DBDouble(dr["sample_corr_fact"]);
cr.collar.sample_corr_fact.err = DB.Utils.DBDouble(dr["sample_corr_fact_err"]);
cr.collar.u_mass_corr_fact_a.v = DB.Utils.DBDouble(dr["u_mass_corr_fact_a"]);
cr.collar.u_mass_corr_fact_a.err = DB.Utils.DBDouble(dr["u_mass_corr_fact_a_err"]);
cr.collar.u_mass_corr_fact_b.v = DB.Utils.DBDouble(dr["u_mass_corr_fact_b"]);
cr.collar.u_mass_corr_fact_b.err = DB.Utils.DBDouble(dr["u_mass_corr_fact_b_err"]);
cr.collar.poison_absorption_fact = DB.Utils.ReifyDoubles(dr["poison_absorption_fact"].ToString());
cr.collar.poison_rod_type = DB.Utils.ReifyStrings(dr["poison_rod_type"].ToString());
TupleArraySlurp(ref cr.collar.poison_rod_a, "poison_rod_a", dr);
TupleArraySlurp(ref cr.collar.poison_rod_b, "poison_rod_b", dr);
TupleArraySlurp(ref cr.collar.poison_rod_c, "poison_rod_c", dr);
}
else
lvl = LogLevels.Info;
dr = db.Get(sel.detectorid, sel.material, "collar_k5_rec");
if (dr != null)
{
cr.k5.k5_mode = DB.Utils.DBBool(dr["k5_mode"]);
cr.k5.k5_checkbox = DB.Utils.ReifyBools(dr["k5_checkbox"].ToString());
cr.k5.k5_item_type = string.Copy(sel.material);
cr.k5.k5_label = DB.Utils.ReifyStrings(dr["k5_label"].ToString());
TupleArraySlurp(ref cr.k5.k5, "k5", dr);
}
else
lvl = LogLevels.Info;
ams.AddMethod(am, cr);
break;
default:
lvl = LogLevels.Error; logid = 34181; current = "Choosing to not construct" + current;
break;
}
switch (lvl)
{
case LogLevels.Info:
current = "Using default for " + current;
lvl = LogLevels.Verbose;
break;
case LogLevels.Verbose:
current = "Retrieved for " + current;
break;
default:
break;
}
NC.App.Pest.logger.TraceEvent(lvl, logid, current);
} // for
}
internal static unsafe curium_ratio_rec MoveCR(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.curium_ratio_rec imr = (INCCAnalysisParams.curium_ratio_rec)md;
curium_ratio_rec m = new curium_ratio_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.curium_ratio_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.curium_ratio_item_type);
m.cr_a = imr.cev.a;
m.cr_b = imr.cev.b;
m.cr_c = imr.cev.c;
m.cr_d = imr.cev.d;
m.curium_ratio_equation = (byte)imr.cev.cal_curve_equation;
m.curium_ratio_type = NewToOldCRVariants(imr.curium_ratio_type);
m.cr_covar_ab = imr.cev.covar(Coeff.a, Coeff.b);
m.cr_covar_ac = imr.cev.covar(Coeff.a, Coeff.c);
m.cr_covar_ad = imr.cev.covar(Coeff.a, Coeff.d);
m.cr_covar_bc = imr.cev.covar(Coeff.b, Coeff.c);
m.cr_covar_bd = imr.cev.covar(Coeff.b, Coeff.d);
m.cr_covar_cd = imr.cev.covar(Coeff.c, Coeff.d);
m.cr_var_a = imr.cev.var_a;
m.cr_var_b = imr.cev.var_b;
m.cr_var_c = imr.cev.var_c;
m.cr_var_d = imr.cev.var_d;
m.cr_sigma_x = imr.cev.sigma_x;
m.cr_upper_mass_limit = imr.cev.upper_mass_limit;
m.cr_lower_mass_limit = imr.cev.lower_mass_limit;
return m;
}
/// <summary>
/// Finalize measurement instance content for analysis
/// Populate calibration parameters maps
/// </summary>
/// <param name="meas">The partially initialized measurement instance</param>
/// <param name="useCurCalibParams">Default behavior is to use active method and other calibration parameters;
/// skipped if Reanalysis prepared the details from database measurement results
/// </param>
public static void FillInReanalysisRemainingDetails(Measurement meas, bool useCurCalibParams = true)
{
// get the current INCC5 analysis methods
if (useCurCalibParams || meas.INCCAnalysisState == null)
{
meas.INCCAnalysisState = new INCCAnalysisState();
INCCSelector sel = new INCCSelector(meas.AcquireState.detector_id, meas.AcquireState.item_type);
AnalysisMethods am;
bool found = CentralizedState.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out am);
if (found)
{
am.selector = sel; // gotta do this so that the equality operator is not incorrect
meas.INCCAnalysisState.Methods = am;
}
else
meas.INCCAnalysisState.Methods = new AnalysisMethods(sel);
} // else use what was there
meas.InitializeContext(clearCounterResults:false);
meas.PrepareINCCResults();
System.Collections.IEnumerator iter = meas.CountingAnalysisResults.GetATypedParameterEnumerator(typeof(Multiplicity));
while (iter.MoveNext())
{
Multiplicity mkey = (Multiplicity)iter.Current;
try
{
MultiplicityCountingRes mcr = (MultiplicityCountingRes)meas.CountingAnalysisResults[mkey];
if (mcr.AB.Unset)
LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(mkey, mcr); // works only if MaxBins is set
MeasOptionSelector mos = new MeasOptionSelector(meas.MeasOption, mkey);
INCCResult result = meas.INCCAnalysisState.Lookup(mos);
result.CopyFrom(mcr);
}
catch (Exception)
{
//logger.TraceEvent(LogLevels.Error, 4027, "PrepareINCCResults error: " + ex.Message);
}
}
// stratum look up, finds existing stratum by name
if (useCurCalibParams || meas.Stratum == null)
{
List<INCCDB.StratumDescriptor> sl = CentralizedState.App.DB.StrataList();
INCCDB.StratumDescriptor s = sl.Find(w => string.Compare(w.Desc.Name, meas.AcquireState.stratum_id.Name, true) == 0);
if (s == null)
meas.Stratum = new Stratum();
else
meas.Stratum = new Stratum(s.Stratum);
}
INCCResults.results_rec xres = new INCCResults.results_rec(meas);
meas.INCCAnalysisResults.TradResultsRec = xres;
CentralizedState.App.Opstate.Measurement = meas; // put the measurement definition on the global state
}
internal static unsafe known_alpha_rec MoveKA(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.known_alpha_rec imr = (INCCAnalysisParams.known_alpha_rec)md;
known_alpha_rec m = new known_alpha_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.known_alpha_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.known_alpha_item_type);
m.ka_a = imr.cev.a;
m.ka_b = imr.cev.b;
m.ka_var_a = imr.cev.var_a;
m.ka_var_b = imr.cev.var_b;
m.ka_covar_ab = imr.cev.covar(Coeff.a, Coeff.b);
m.ka_sigma_x = imr.cev.sigma_x;
m.ka_ring_ratio_a = imr.ring_ratio.a;
m.ka_ring_ratio_b = imr.ring_ratio.b;
m.ka_ring_ratio_c = imr.ring_ratio.c;
m.ka_ring_ratio_d = imr.ring_ratio.d;
m.ka_alpha_wt = imr.alpha_wt;
m.ka_rho_zero = imr.rho_zero;
m.ka_ring_ratio_equation = (double)imr.ring_ratio.cal_curve_equation;
m.ka_upper_mass_limit = imr.cev.upper_mass_limit;
m.ka_lower_mass_limit = imr.cev.lower_mass_limit;
m.ka_heavy_metal_corr_factor = imr.heavy_metal_corr_factor;
m.ka_heavy_metal_reference = imr.heavy_metal_reference;
m.ka_k = imr.k;
m.ka_known_alpha_type = (double)imr.known_alpha_type;
TransferUtils.CopyDbls(imr.dcl_mass, m.ka_dcl_mass);
TransferUtils.CopyDbls(imr.doubles, m.ka_doubles);
return m;
}
/// <summary>
/// Construct a full measurement state and set it on the internal lameness
/// </summary>
/// <param name="acq">Acquire Parameters</param>
/// <param name="det">Detector</param>
/// <param name="mo">MeasurementOption</param>
public static void BuildMeasurement(AcquireParameters acq, Detector det, AssaySelector.MeasurementOption mo)
{
// gather it all together
MeasurementTuple mt = new MeasurementTuple(new DetectorList(det),
CentralizedState.App.DB.TestParameters.Get(),
GetCurrentNormParams(det),
GetCurrentBackgroundParams(det),
GetAcquireIsotopics(acq),
acq,
GetCurrentHVCalibrationParams(det));
det.Id.source = acq.data_src; // set the detector overall data source value here
// create the context holder for the measurement. Everything is rooted here ...
Measurement meas = new Measurement(mt, mo, CentralizedState.App.Logger(LMLoggers.AppSection.Data));
if (det.ListMode)
{
// dev note: design flaw exposed by this mess here, when LM has > 1 SVR, there is no way to associate > 1 SVRs with a single detector/SR/Mult/Conn pairing
// It should be the other way around, the Mult params for each LMMultiplicity analyzer override the single entry on the sr_parms_rec when each analyis is performed.
meas.AnalysisParams = CentralizedState.App.LMBD.CountingParameters(det, applySRFromDetector: true);
if (mo == AssaySelector.MeasurementOption.unspecified) // pure List Mode, not INCC5
{
// for a list-mode-only measurement with a multiplicity analyzer the detector SR params must match at least one of the multiplicity analyzer SR params
ApplyVSRChangesToDefaultDetector(meas);
}
else // it is an INCC5 analysis driven with LM data
{
// check to see if detector settings are copied into an active CA entry
if (!meas.AnalysisParams.Exists(w => { return((w is Multiplicity) && (w as Multiplicity).Equals(det.MultiplicityParams) && w.Active); }))
{
meas.AnalysisParams.Add(det.MultiplicityParams);
}
}
}
else
{
// prepare analyzer params from detector SR params
meas.AnalysisParams = CentralizedState.App.LMBD.CountingParameters(det, applySRFromDetector: false);
if (!meas.AnalysisParams.Exists(w => { return((w is Multiplicity) && (w as Multiplicity).Equals(det.MultiplicityParams)); }))
{
meas.AnalysisParams.Add(det.MultiplicityParams);
}
}
// get the INCC5 analysis methods
meas.INCCAnalysisState = new INCCAnalysisState();
INCCSelector sel = new INCCSelector(acq.detector_id, acq.item_type);
AnalysisMethods am;
bool found = CentralizedState.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out am);
if (found)
{
am.selector = sel; // gotta do this so that the equality operator is not incorrect
meas.INCCAnalysisState.Methods = am;
}
else
{
meas.INCCAnalysisState.Methods = new AnalysisMethods(sel);
}
meas.InitializeContext();
meas.PrepareINCCResults();
// next: stratum not set
List <INCCDB.StratumDescriptor> sl = CentralizedState.App.DB.StrataList();
INCCDB.StratumDescriptor s = sl.Find(w => w.Desc.CompareTo(acq.stratum_id) == 0);
if (s == null)
{
meas.Stratum = new Stratum();
}
else
{
meas.Stratum = new Stratum(s.Stratum);
}
INCCResults.results_rec xres = new INCCResults.results_rec(meas);
meas.INCCAnalysisResults.TradResultsRec = xres;
CentralizedState.App.Opstate.Measurement = meas; // put the measurement definition on the global state
// ready for insertion of methods and processing start
}
internal static unsafe multiplicity_rec MoveMult(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.multiplicity_rec imr = (INCCAnalysisParams.multiplicity_rec)md;
multiplicity_rec mr = new multiplicity_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, mr.multiplicity_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, mr.multiplicity_item_type);
mr.mul_a = imr.a;
mr.mul_b = imr.b;
mr.mul_c = imr.c;
mr.mul_vi1 = imr.vi1;
mr.mul_vi2 = imr.vi2;
mr.mul_vi3 = imr.vi3;
mr.mul_vs1 = imr.vs1;
mr.mul_vs2 = imr.vs2;
mr.mul_vs3 = imr.vs3;
mr.mul_alpha_weight = imr.alpha_weight;
mr.mul_sf_rate = imr.sf_rate;
mr.mul_sigma_x = imr.sigma_x;
mr.mul_solve_efficiency = (byte)imr.solve_efficiency;
return mr;
}
/// <summary>
/// Do the third phase . . .
/// From calc_res.cpp,
/// </summary>
public static void CalculateResults(this Measurement meas)
{
IEnumerator iter = meas.CountingAnalysisResults.GetMultiplicityEnumerator();
while (iter.MoveNext())
{
Multiplicity mkey = (Multiplicity)((KeyValuePair<SpecificCountingAnalyzerParams, object>)(iter.Current)).Key;
if (NC.App.Opstate.IsAbortRequested)
return;
INCCResult results;
MeasOptionSelector ar = new MeasOptionSelector(meas.MeasOption, mkey);
bool found = meas.INCCAnalysisResults.TryGetValue(ar, out results);
if (!found)
{
meas.AddErrorMessage("No results available", 10151, mkey);
return;
}
/* if using measure to precision, and max # runs reached, then add warning message indicating actual precision reached. */
if (meas.AcquireState.acquire_type == AcquireConvergence.DoublesPrecision)
{
if (results.rates.DTCRates.DoublesRate != 0.0)
{
double error = results.rates.DTCRates.Doubles.err / results.rates.DTCRates.DoublesRate * 100.0;
if (error > meas.AcquireState.meas_precision)
{
meas.AddWarningMessage("Measurement doubles error = " + error.ToString("F2"), 10126, mkey);
}
}
}
else if (meas.AcquireState.acquire_type == AcquireConvergence.TriplesPrecision)
{
if (results.rates.DTCRates.TriplesRate != 0.0)
{
double error = results.rates.DTCRates.Triples.err / results.rates.DTCRates.TriplesRate * 100.0;
if (error > meas.AcquireState.meas_precision)
{
meas.AddWarningMessage("Measurement triples error = " + error.ToString("F2"), 10127, mkey);
}
}
}
if (meas.MeasOption == AssaySelector.MeasurementOption.rates) // Doug Requirement #2
{
// for a rates only measurement, all done!
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10180, "Rates Only measurement complete");
continue;
}
try
{
switch (meas.MeasOption)
{
case AssaySelector.MeasurementOption.background: // Doug Requirement #3
// a bkg is an average over a bunch of cycles with only the deadtime correction applied,
// but note the variant for Truncated Mult background, where an additional calculation is made
if (results.rates.DTCRates.DoublesRate > meas.Tests.bkgDoublesRateLimit)
meas.AddWarningMessage("Background doubles rate " + results.rates.DTCRates.DoublesRate + " greater than " + meas.Tests.bkgDoublesRateLimit, 10141, mkey);
if (results.rates.DTCRates.TriplesRate > meas.Tests.bkgTriplesRateLimit)
meas.AddWarningMessage("Background triples rate " + results.rates.DTCRates.TriplesRate + " greater than " + meas.Tests.bkgTriplesRateLimit, 10142, mkey);
// dev note: this is a background measurement per se, so we copy the results to the Background class and store the entire thing that way
// NEXT: Need to account for Active bkg beginning here.
if (Integ.GetCurrentAcquireParams().well_config == WellConfiguration.Active)// Is an active acquisition.
{
meas.Background.INCCActive.CopyFrom(results.rates.DeadtimeCorrectedRates);
}
else
meas.Background.CopyFrom(results.rates);
// maybe if (INCCAnalysisState.Methods.Has(AnalysisMethod.TruncatedMultiplicity))
if (meas.Background.TMBkgParams.ComputeTMBkg)
// Trunc Mult Bkg step, calc_tm_rates, sets TM bkg rates on Measurement.Background
INCCAnalysis.calc_tm_rates(mkey, results, meas, meas.Background.TMBkgParams, meas.Detector.Id.SRType);
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10181, "Background measurement complete");
break;
case AssaySelector.MeasurementOption.initial:
INCCResults.results_init_src_rec results_init_src = (INCCResults.results_init_src_rec)results;
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10182, "Calculating Initial source measurement results");
bool funhappy = INCCAnalysis.initial_source_meas(meas, mkey, RatesAdjustments.DeadtimeCorrected);
if (!funhappy || !results_init_src.pass)
{
meas.AddWarningMessage("Initial source measurement failed", 10123, mkey);
}
// on fail, only the relevant results_init_src_rec is saved
// on pass, the normalization parameters are modified with the results_init_src_rec results, and so both are udpated.
break;
case AssaySelector.MeasurementOption.normalization:
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10183, "Calculating Normalization measurement results");
bool happyfun = INCCAnalysis.bias_test(meas, mkey, RatesAdjustments.DeadtimeCorrected);
if (!happyfun)
{
meas.AddWarningMessage("Normalization test -- data quality is inadequate", 10124, mkey);
}
break;
case AssaySelector.MeasurementOption.precision:
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10184, "Calculating Precision measurement results");
bool charmyfun = INCCAnalysis.precision_test(meas, mkey, RatesAdjustments.DeadtimeCorrected);
if (!charmyfun)
{
meas.AddWarningMessage("Precision test failed", 10125, mkey);
}
break;
case AssaySelector.MeasurementOption.calibration: // from calc_res.cpp
if (meas.INCCAnalysisState.Methods.CalibrationAnalysisSelected())
{
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10185, "Calculating Calibration measurement results");
// dev note: since the analysis routines have similar signatures, design a class OK?
if (meas.INCCAnalysisState.Methods.Has(AnalysisMethod.CalibrationCurve))
{
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10191, "Calculating " + AnalysisMethod.CalibrationCurve.FullName() + " measurement results");
// get the current results_cal_curve_rec
INCCMethodResults.results_cal_curve_rec ccres = (INCCMethodResults.results_cal_curve_rec)
meas.INCCAnalysisResults.LookupMethodResults(mkey, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.CalibrationCurve, true);
INCCAnalysisParams.cal_curve_rec cal_curve = (INCCAnalysisParams.cal_curve_rec)meas.INCCAnalysisState.Methods.GetMethodParameters(AnalysisMethod.CalibrationCurve);
ccres.methodParams = new INCCAnalysisParams.cal_curve_rec(cal_curve);
double pu_mass = ccres.pu_mass.v;
meas.Isotopics.UpdateDeclaredPuMass(meas.MeasDate, ref pu_mass, INCCAnalysis.INCCParity);
ccres.pu_mass.v = pu_mass;
ccres.pu_mass.err = 0.0;
ccres.pu240e_mass.err = 0.0;
double pu240e_mass = ccres.pu240e_mass.v;
meas.Isotopics.calc_pu240e(pu_mass, out pu240e_mass, meas);
ccres.pu240e_mass.v = pu240e_mass;
}
if (meas.INCCAnalysisState.Methods.Has(AnalysisMethod.KnownA))
{
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10192, "Calculating " + AnalysisMethod.KnownA.FullName() + " calibration results");
INCCMethodResults.results_known_alpha_rec kares = INCCAnalysis.CalculateKnownAlpha(mkey, results.rates, meas, RatesAdjustments.DeadtimeCorrected);
if (kares == null)
{
meas.AddErrorMessage("Known alpha analysis error", 10153, mkey);
}
else
{
kares.pu_mass.v = meas.AcquireState.mass;
double pu_mass = kares.pu_mass.v;
meas.Isotopics.UpdateDeclaredPuMass(meas.MeasDate, ref pu_mass, INCCAnalysis.INCCParity);
kares.pu_mass.v = pu_mass;
kares.pu_mass.err = 0.0;
kares.pu240e_mass.err = 0.0;
double pu240e_mass = kares.pu240e_mass.v;
meas.Isotopics.calc_pu240e(pu_mass, out pu240e_mass, meas);
kares.pu240e_mass.v = pu240e_mass;
}
}
if (meas.INCCAnalysisState.Methods.Has(AnalysisMethod.Active))
{
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10192, "Arranging " + AnalysisMethod.Active.FullName() + " calibration results");
INCCSelector sel = new INCCSelector(meas.INCCAnalysisState.Methods.selector);
INCCAnalysisParams.active_rec act;
INCCAnalysisParams.INCCMethodDescriptor surr = meas.INCCAnalysisState.Methods.GetMethodParameters(AnalysisMethod.Active);
if (surr == null)
{
act = new INCCAnalysisParams.active_rec();
meas.INCCAnalysisState.Methods.AddMethod(AnalysisMethod.Active, act);
}
else
{
act = (INCCAnalysisParams.active_rec)surr;
}
INCCMethodResults.results_active_rec res;
res = (INCCMethodResults.results_active_rec)meas.INCCAnalysisResults.LookupMethodResults(mkey, sel, AnalysisMethod.Active, true);
// all this does is copy the declared mass over to the results, WTF
res.u235_mass.v = meas.AcquireState.mass;
}
if (meas.INCCAnalysisState.Methods.Has(AnalysisMethod.AddASource))
{
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10152, "Calculating " + AnalysisMethod.AddASource.FullName() + " calibration results");
INCCSelector sel = new INCCSelector(meas.INCCAnalysisState.Methods.selector);
INCCAnalysisParams.add_a_source_rec aas;
INCCMethodResults.results_add_a_source_rec acres;
INCCAnalysisParams.INCCMethodDescriptor surr = meas.INCCAnalysisState.Methods.GetMethodParameters(AnalysisMethod.AddASource);
if (surr == null)
{
aas = new INCCAnalysisParams.add_a_source_rec();
meas.INCCAnalysisState.Methods.AddMethod(AnalysisMethod.AddASource, aas);
}
else
{
aas = (INCCAnalysisParams.add_a_source_rec)surr;
}
acres = (INCCMethodResults.results_add_a_source_rec)meas.INCCAnalysisResults.LookupMethodResults(mkey, sel, AnalysisMethod.AddASource, true);
acres.pu_mass.v = meas.AcquireState.mass;
// update_declared_pu_mass
double pu_mass = acres.pu_mass.v;
meas.Isotopics.UpdateDeclaredPuMass(meas.MeasDate, ref pu_mass, INCCAnalysis.INCCParity);
acres.pu_mass.v = pu_mass;
acres.pu_mass.err = 0.0;
acres.pu240e_mass.err = 0.0;
double pu240e_mass = acres.pu240e_mass.v;
meas.Isotopics.calc_pu240e(pu_mass, out pu240e_mass, meas);
acres.pu240e_mass.v = pu240e_mass;
}
}
else
{
meas.AddErrorMessage("No Calibration analysis methods selected", 10153, mkey);
}
break;
case AssaySelector.MeasurementOption.verification:
// see INCC calc_asy.cpp
// dev note: check for item in the item table, make sure to place this item id on the MeasurementId.item property
if (!string.IsNullOrEmpty(meas.AcquireState.item_id))
{
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10194, "Using item id '{0}'", meas.AcquireState.item_id);
}
else
meas.Logger.TraceEvent(NCCReporter.LogLevels.Verbose, 10194, "No item id");
if (meas.INCCAnalysisState.Methods.VerificationAnalysisSelected())
{
meas.Logger.TraceEvent(NCCReporter.LogLevels.Info, 10186, "Calculating {0} measurement results", meas.MeasOption.PrintName());
meas.CalculateVerificationResults(mkey, results);
}
else
{
meas.AddErrorMessage("No analysis methods selected", 10156, mkey);
}
break;
case AssaySelector.MeasurementOption.holdup: // NEXT: Hold-up held up, implement it #35
meas.Logger.TraceEvent(NCCReporter.LogLevels.Error, 10187, "Holdup analysis unsupported");
break;
}
}
catch (Exception e)
{
meas.Logger.TraceException(e);
}
}
}
public unsafe void BuildCalibration(INCCInitialDataCalibrationFile idcf, int num)
{
mlogger.TraceEvent(LogLevels.Verbose, 34200, "Building calibration content from {0} {1}", num, idcf.Path);
bool overwrite = NC.App.AppContext.OverwriteImportedDefs;
IEnumerator iter = idcf.DetectorMaterialMethodParameters.GetDetectorMaterialEnumerator();
while (iter.MoveNext())
{
DetectorMaterialMethod mkey = ((KeyValuePair<DetectorMaterialMethod, object>)iter.Current).Key;
mlogger.TraceEvent(LogLevels.Verbose, 34210, "Constructing calibration for {0} {1}", mkey.detector_id, mkey.item_type);
INCCDB.Descriptor desc = new INCCDB.Descriptor(mkey.item_type, "");
if (!NC.App.DB.Materials.Has(desc) || overwrite)
{
NC.App.DB.Materials.Update(desc);
}
Detector det;
// look in real detector list for entry with this basic id, if not found, punt or later try creating a new empty detector, it will be filled in later as processing proceeds
det = NC.App.DB.Detectors.GetItByDetectorId(mkey.detector_id);
if (det == null)
{
// old code punted if detector not found
mlogger.TraceEvent(LogLevels.Warning, 34207, "Skipping detector {0}, pre-existing def not found", mkey.detector_id); // dev note: need flags to control this ehavior in a few more places
continue;
}
IEnumerator miter2 = idcf.DetectorMaterialMethodParameters.GetMethodEnumerator(mkey.detector_id, mkey.item_type);
if (miter2 == null)
continue;
INCCSelector sel = new INCCSelector(mkey.detector_id, mkey.item_type);
AnalysisMethods am;
bool found = NC.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out am);
if (!found || am == null)
{
am = new AnalysisMethods(mlogger);
am.modified = true;
NC.App.DB.DetectorMaterialAnalysisMethods.Add(sel, am);
}
while (miter2.MoveNext())
{
// use ref here, not copy so updates update the ref? nope, it;s a map, need to remove and replace
int cam = OldTypeToOldMethodId(miter2.Current);
mlogger.TraceEvent(LogLevels.Verbose, 34211, "Converting {0} {1} method {2}", mkey.detector_id, mkey.item_type, OldToNewMethodId(cam).FullName());
// save the analysis method obtained here under the existing/new detector+material type pair
switch (cam)
{
case INCC.METHOD_NONE:
analysis_method_rec iamr = (analysis_method_rec)miter2.Current;
// create entries in the am map if needed, copy other settings onto am proper
am.Backup = OldToNewMethodId(iamr.backup_method);
am.Normal = OldToNewMethodId(iamr.normal_method);
am.choices[(int)AnalysisMethod.CalibrationCurve] = (iamr.cal_curve == 0 ? false : true);
am.choices[(int)AnalysisMethod.Active] = (iamr.active == 0 ? false : true);
am.choices[(int)AnalysisMethod.ActiveMultiplicity] = (iamr.active_mult == 0 ? false : true);
am.choices[(int)AnalysisMethod.ActivePassive] = (iamr.active_passive == 0 ? false : true);
am.choices[(int)AnalysisMethod.AddASource] = (iamr.add_a_source == 0 ? false : true);
am.choices[(int)AnalysisMethod.Collar] = (iamr.collar == 0 ? false : true);
am.choices[(int)AnalysisMethod.CuriumRatio] = (iamr.curium_ratio == 0 ? false : true);
am.choices[(int)AnalysisMethod.KnownA] = (iamr.known_alpha == 0 ? false : true);
am.choices[(int)AnalysisMethod.KnownM] = (iamr.known_m == 0 ? false : true);
am.choices[(int)AnalysisMethod.Multiplicity] = (iamr.multiplicity == 0 ? false : true);
am.choices[(int)AnalysisMethod.TruncatedMultiplicity] = (iamr.truncated_mult == 0 ? false : true);
if (am.AnySelected())
am.choices[(int)AnalysisMethod.None] = am.choices[(int)AnalysisMethod.INCCNone] = false;
break;
case INCC.METHOD_CALCURVE:
cal_curve_rec cal_curve = (cal_curve_rec)miter2.Current;
INCCAnalysisParams.cal_curve_rec cc = new INCCAnalysisParams.cal_curve_rec();
cc.heavy_metal_corr_factor = cal_curve.cc_heavy_metal_corr_factor;
cc.heavy_metal_reference = cal_curve.cc_heavy_metal_reference;
cc.cev.lower_mass_limit = cal_curve.cc_lower_mass_limit;
cc.cev.upper_mass_limit = cal_curve.cc_upper_mass_limit;
cc.percent_u235 = cal_curve.cc_percent_u235;
TransferUtils.Copy(ref cc.dcl_mass, cal_curve.cc_dcl_mass, INCC.MAX_NUM_CALIB_PTS);
TransferUtils.Copy(ref cc.doubles, cal_curve.cc_doubles, INCC.MAX_NUM_CALIB_PTS);
cc.cev.a = cal_curve.cc_a; cc.cev.b = cal_curve.cc_b;
cc.cev.c = cal_curve.cc_c; cc.cev.d = cal_curve.cc_d;
cc.cev.var_a = cal_curve.cc_var_a; cc.cev.var_b = cal_curve.cc_var_b;
cc.cev.var_c = cal_curve.cc_var_c; cc.cev.var_d = cal_curve.cc_var_d;
cc.cev.setcovar(Coeff.a,Coeff.b,cal_curve.cc_covar_ab);
cc.cev._covar[0, 2] = cal_curve.cc_covar_ac;
cc.cev._covar[0, 3] = cal_curve.cc_covar_ad;
cc.cev._covar[1, 2] = cal_curve.cc_covar_bc;
cc.cev._covar[1, 3] = cal_curve.cc_covar_bd;
cc.cev._covar[2, 3] = cal_curve.cc_covar_cd;
cc.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)cal_curve.cal_curve_equation;
cc.CalCurveType = (INCCAnalysisParams.CalCurveType)cal_curve.cc_cal_curve_type;
cc.cev.sigma_x = cal_curve.cc_sigma_x;
am.AddMethod(AnalysisMethod.CalibrationCurve, cc);
break;
case INCC.METHOD_AKNOWN:
known_alpha_rec known_alpha = (known_alpha_rec)miter2.Current;
INCCAnalysisParams.known_alpha_rec ka = new INCCAnalysisParams.known_alpha_rec();
ka.alpha_wt = known_alpha.ka_alpha_wt;
TransferUtils.Copy(ref ka.dcl_mass, known_alpha.ka_dcl_mass, INCC.MAX_NUM_CALIB_PTS);
TransferUtils.Copy(ref ka.doubles, known_alpha.ka_doubles, INCC.MAX_NUM_CALIB_PTS);
ka.heavy_metal_corr_factor = known_alpha.ka_heavy_metal_corr_factor;
ka.heavy_metal_reference = known_alpha.ka_heavy_metal_reference;
ka.k = known_alpha.ka_k;
ka.known_alpha_type = (INCCAnalysisParams.KnownAlphaVariant)known_alpha.ka_known_alpha_type;
ka.lower_corr_factor_limit = known_alpha.ka_lower_corr_factor_limit;
ka.upper_corr_factor_limit = known_alpha.ka_upper_corr_factor_limit;
ka.rho_zero = known_alpha.ka_rho_zero;
ka.ring_ratio.cal_curve_equation = (INCCAnalysisParams.CurveEquation)known_alpha.ka_ring_ratio_equation;
ka.ring_ratio.a = known_alpha.ka_ring_ratio_a;
ka.ring_ratio.b = known_alpha.ka_ring_ratio_b;
ka.ring_ratio.c = known_alpha.ka_ring_ratio_c;
ka.ring_ratio.d = known_alpha.ka_ring_ratio_d;
ka.cev.a = known_alpha.ka_a;
ka.cev.b = known_alpha.ka_b;
ka.cev.var_a = known_alpha.ka_var_a;
ka.cev.var_b = known_alpha.ka_var_b;
ka.cev.sigma_x = known_alpha.ka_sigma_x;
ka.cev._covar[(int)Coeff.a, (int)Coeff.b] = known_alpha.ka_covar_ab;
ka.cev.lower_mass_limit = known_alpha.ka_lower_mass_limit;
ka.cev.upper_mass_limit = known_alpha.ka_upper_mass_limit;
am.AddMethod(AnalysisMethod.KnownA, ka);
break;
case INCC.METHOD_MKNOWN:
known_m_rec known_m = (known_m_rec)miter2.Current;
INCCAnalysisParams.known_m_rec km = new INCCAnalysisParams.known_m_rec();
km.sf_rate = known_m.km_sf_rate;
km.vs1 = known_m.km_vs1;
km.vs2 = known_m.km_vs2;
km.vi1 = known_m.km_vi1;
km.vi2 = known_m.km_vi2;
km.b = known_m.km_b;
km.c = known_m.km_c;
km.lower_mass_limit = known_m.km_lower_mass_limit;
km.upper_mass_limit = known_m.km_upper_mass_limit;
am.AddMethod(AnalysisMethod.KnownM, km);
break;
case INCC.METHOD_MULT:
multiplicity_rec multiplicity = (multiplicity_rec)miter2.Current;
INCCAnalysisParams.multiplicity_rec m = new INCCAnalysisParams.multiplicity_rec();
m.solve_efficiency = (INCCAnalysisParams.MultChoice)multiplicity.mul_solve_efficiency;
m.sf_rate = multiplicity.mul_sf_rate;
m.vs1 = multiplicity.mul_vs1;
m.vs2 = multiplicity.mul_vs2;
m.vs3 = multiplicity.mul_vs3;
m.vi1 = multiplicity.mul_vi1;
m.vi2 = multiplicity.mul_vi2;
m.vi3 = multiplicity.mul_vi3;
m.a = multiplicity.mul_a;
m.b = multiplicity.mul_b;
m.c = multiplicity.mul_c;
m.sigma_x = multiplicity.mul_sigma_x;
m.alpha_weight = multiplicity.mul_alpha_weight;
am.AddMethod(AnalysisMethod.Multiplicity, m);
break;
case INCC.DUAL_ENERGY_MULT_SAVE_RESTORE:
de_mult_rec de_mult = (de_mult_rec)miter2.Current;
INCCAnalysisParams.de_mult_rec de = new INCCAnalysisParams.de_mult_rec();
TransferUtils.Copy(ref de.detector_efficiency, de_mult.de_detector_efficiency, INCC.MAX_DUAL_ENERGY_ROWS);
TransferUtils.Copy(ref de.inner_outer_ring_ratio, de_mult.de_inner_outer_ring_ratio, INCC.MAX_DUAL_ENERGY_ROWS);
TransferUtils.Copy(ref de.neutron_energy, de_mult.de_neutron_energy, INCC.MAX_DUAL_ENERGY_ROWS);
TransferUtils.Copy(ref de.relative_fission, de_mult.de_relative_fission, INCC.MAX_DUAL_ENERGY_ROWS);
de.inner_ring_efficiency = de_mult.de_inner_ring_efficiency;
de.outer_ring_efficiency = de_mult.de_outer_ring_efficiency;
am.AddMethod(AnalysisMethod.DUAL_ENERGY_MULT_SAVE_RESTORE, de);
break;
case INCC.METHOD_TRUNCATED_MULT:
truncated_mult_rec truncated_mult = (truncated_mult_rec)miter2.Current;
INCCAnalysisParams.truncated_mult_rec tm = new INCCAnalysisParams.truncated_mult_rec();
tm.a = truncated_mult.tm_a;
tm.b = truncated_mult.tm_b;
tm.known_eff = (truncated_mult.tm_known_eff == 0 ? false : true);
tm.solve_eff = (truncated_mult.tm_solve_eff == 0 ? false : true);
am.AddMethod(AnalysisMethod.TruncatedMultiplicity, tm);
break;
case INCC.METHOD_CURIUM_RATIO:
curium_ratio_rec curium_ratio = (curium_ratio_rec)miter2.Current;
INCCAnalysisParams.curium_ratio_rec cr = new INCCAnalysisParams.curium_ratio_rec();
cr.curium_ratio_type = OldToNewCRVariants(curium_ratio.curium_ratio_type);
cr.cev.a = curium_ratio.cr_a; cr.cev.b = curium_ratio.cr_b;
cr.cev.c = curium_ratio.cr_c; cr.cev.d = curium_ratio.cr_d;
cr.cev.var_a = curium_ratio.cr_var_a; cr.cev.var_b = curium_ratio.cr_var_b;
cr.cev.var_c = curium_ratio.cr_var_c; cr.cev.var_d = curium_ratio.cr_var_d;
cr.cev.setcovar(Coeff.a,Coeff.b,curium_ratio.cr_covar_ab);
cr.cev._covar[0, 2] = curium_ratio.cr_covar_ac;
cr.cev._covar[0, 3] = curium_ratio.cr_covar_ad;
cr.cev._covar[1, 2] = curium_ratio.cr_covar_bc;
cr.cev._covar[1, 3] = curium_ratio.cr_covar_bd;
cr.cev._covar[2, 3] = curium_ratio.cr_covar_cd;
cr.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)curium_ratio.curium_ratio_equation;
cr.cev.sigma_x = curium_ratio.cr_sigma_x;
cr.cev.lower_mass_limit = curium_ratio.cr_lower_mass_limit;
cr.cev.upper_mass_limit = curium_ratio.cr_upper_mass_limit;
am.AddMethod(AnalysisMethod.CuriumRatio, cr);
break;
case INCC.METHOD_ADDASRC:
add_a_source_rec add_a_source = (add_a_source_rec)miter2.Current;
INCCAnalysisParams.add_a_source_rec aas = new INCCAnalysisParams.add_a_source_rec();
aas.cev.a = add_a_source.ad_a; aas.cev.b = add_a_source.ad_b;
aas.cev.c = add_a_source.ad_c; aas.cev.d = add_a_source.ad_d;
aas.cev.var_a = add_a_source.ad_var_a; aas.cev.var_b = add_a_source.ad_var_b;
aas.cev.var_c = add_a_source.ad_var_c; aas.cev.var_d = add_a_source.ad_var_d;
aas.cev.setcovar(Coeff.a,Coeff.b,add_a_source.ad_covar_ab);
aas.cev._covar[0, 2] = add_a_source.ad_covar_ac;
aas.cev._covar[0, 3] = add_a_source.ad_covar_ad;
aas.cev._covar[1, 2] = add_a_source.ad_covar_bc;
aas.cev._covar[1, 3] = add_a_source.ad_covar_bd;
aas.cev._covar[2, 3] = add_a_source.ad_covar_cd;
aas.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)add_a_source.add_a_source_equation;
aas.cev.sigma_x = add_a_source.ad_sigma_x;
aas.cev.lower_mass_limit = add_a_source.ad_lower_mass_limit;
aas.cev.upper_mass_limit = add_a_source.ad_upper_mass_limit;
TransferUtils.Copy(ref aas.dcl_mass, add_a_source.ad_dcl_mass, INCC.MAX_NUM_CALIB_PTS);
TransferUtils.Copy(ref aas.doubles, add_a_source.ad_doubles, INCC.MAX_NUM_CALIB_PTS);
aas.cf.a = add_a_source.ad_cf_a; aas.cf.b = add_a_source.ad_cf_b;
aas.cf.c = add_a_source.ad_cf_c; aas.cf.d = add_a_source.ad_cf_d;
aas.dzero_avg = add_a_source.ad_dzero_avg;
aas.num_runs = add_a_source.ad_num_runs;
aas.tm_dbls_rate_upper_limit = add_a_source.ad_tm_dbls_rate_upper_limit;
aas.tm_weighting_factor = add_a_source.ad_tm_weighting_factor;
aas.use_truncated_mult = (add_a_source.ad_use_truncated_mult == 0 ? false : true);
aas.dzero_ref_date = INCC.DateFrom(TransferUtils.str(add_a_source.ad_dzero_ref_date, INCC.DATE_TIME_LENGTH));
aas.position_dzero = TransferUtils.Copy(add_a_source.ad_position_dzero, INCC.MAX_ADDASRC_POSITIONS);
am.AddMethod(AnalysisMethod.AddASource, aas);
break;
case INCC.METHOD_ACTIVE:
active_rec active = (active_rec)miter2.Current;
INCCAnalysisParams.active_rec ar = new INCCAnalysisParams.active_rec();
ar.cev.lower_mass_limit = active.act_lower_mass_limit;
ar.cev.upper_mass_limit = active.act_upper_mass_limit;
TransferUtils.Copy(ref ar.dcl_mass, active.act_dcl_mass, INCC.MAX_NUM_CALIB_PTS);
TransferUtils.Copy(ref ar.doubles, active.act_doubles, INCC.MAX_NUM_CALIB_PTS);
ar.cev.a = active.act_a; ar.cev.b = active.act_b;
ar.cev.c = active.act_c; ar.cev.d = active.act_d;
ar.cev.var_a = active.act_var_a; ar.cev.var_b = active.act_var_b;
ar.cev.var_c = active.act_var_c; ar.cev.var_d = active.act_var_d;
ar.cev.setcovar(Coeff.a,Coeff.b,active.act_covar_ab);
ar.cev._covar[0, 2] = active.act_covar_ac;
ar.cev._covar[0, 3] = active.act_covar_ad;
ar.cev._covar[1, 2] = active.act_covar_bc;
ar.cev._covar[1, 3] = active.act_covar_bd;
ar.cev._covar[2, 3] = active.act_covar_cd;
ar.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)active.active_equation;
ar.cev.sigma_x = active.act_sigma_x;
am.AddMethod(AnalysisMethod.Active, ar);
break;
case INCC.METHOD_ACTPAS:
active_passive_rec active_passive = (active_passive_rec)miter2.Current;
INCCAnalysisParams.active_passive_rec apr = new INCCAnalysisParams.active_passive_rec();
apr.cev.lower_mass_limit = active_passive.ap_lower_mass_limit;
apr.cev.upper_mass_limit = active_passive.ap_upper_mass_limit;
apr.cev.a = active_passive.ap_a; apr.cev.b = active_passive.ap_b;
apr.cev.c = active_passive.ap_c; apr.cev.d = active_passive.ap_d;
apr.cev.var_a = active_passive.ap_var_a; apr.cev.var_b = active_passive.ap_var_b;
apr.cev.var_c = active_passive.ap_var_c; apr.cev.var_d = active_passive.ap_var_d;
apr.cev.setcovar(Coeff.a,Coeff.b,active_passive.ap_covar_ab);
apr.cev._covar[0, 2] = active_passive.ap_covar_ac;
apr.cev._covar[0, 3] = active_passive.ap_covar_ad;
apr.cev._covar[1, 2] = active_passive.ap_covar_bc;
apr.cev._covar[1, 3] = active_passive.ap_covar_bd;
apr.cev._covar[2, 3] = active_passive.ap_covar_cd;
apr.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)active_passive.active_passive_equation;
apr.cev.sigma_x = active_passive.ap_sigma_x;
am.AddMethod(AnalysisMethod.ActivePassive, apr);
break;
case INCC.COLLAR_SAVE_RESTORE:
mlogger.TraceEvent(LogLevels.Verbose, 34213, " Collar params entry for COLLAR_SAVE_RESTORE");
break;
case INCC.COLLAR_DETECTOR_SAVE_RESTORE:
mlogger.TraceEvent(LogLevels.Verbose, 34212, " Main entry for COLLAR_DETECTOR_SAVE_RESTORE");
break;
case INCC.COLLAR_K5_SAVE_RESTORE:
mlogger.TraceEvent(LogLevels.Verbose, 34214, " K5 entry for COLLAR_K5_SAVE_RESTORE");
collar_k5_rec collar_k5 = (collar_k5_rec)miter2.Current;
INCCAnalysisParams.collar_combined_rec combined = CollarEntryProcesser(idcf, sel, collar_k5.collar_k5_mode);
if (combined != null)
am.AddMethod(AnalysisMethod.Collar, combined);
break;
case INCC.METHOD_ACTIVE_MULT:
active_mult_rec active_mult = (active_mult_rec)miter2.Current;
INCCAnalysisParams.active_mult_rec acm = new INCCAnalysisParams.active_mult_rec();
acm.vf1 = active_mult.am_vf1;
acm.vf2 = active_mult.am_vf2;
acm.vf3 = active_mult.am_vf3;
acm.vt1 = active_mult.am_vt1;
acm.vt2 = active_mult.am_vt2;
acm.vt3 = active_mult.am_vt2;
am.AddMethod(AnalysisMethod.ActiveMultiplicity, acm);
break;
case INCC.WMV_CALIB_TOKEN:
mlogger.TraceEvent(LogLevels.Warning, 34247, "Skipping calib token"); // todo: weighted multiplicity not fully implemented throughout
break;
}
}
}
}
/// <summary>
/// Prepare measurement instance content for analysis
/// Populate calibration and counting parameters maps
/// Create general results and specific results dictionary map entries
/// Set up stratum details
/// </summary>
/// <param name="meas">The partially initialized measurement instance</param>
/// <param name="useCurCalibParams">Default behavior is to use active method and other calibration parameters;
/// skipped if Reanalysis prepared the details from database measurement results
/// </param>
static public void FillInMeasurementDetails(Measurement meas, bool useCurCalibParams = true)
{
if (meas.Detector.ListMode)
{
// APluralityOfMultiplicityAnalyzers: see below
// URGENT: see below
//if (an INCC5 DB cycle read or DB Ver reanalysis then rebuild the analyzers from the associated saved LM results:)
// object x = CentralizedState.App.DB.GetAnalyzersFromResults(meas.Detector, meas.MeasurementId);
//else
meas.AnalysisParams = CentralizedState.App.LMBD.CountingParameters(meas.Detector, applySRFromDetector: true);
if (meas.MeasOption.IsListMode()) // pure List Mode, not INCC5
{
// for a list-mode-only measurement with a multiplicity analyzer the detector SR params must match at least one of the multiplicity analyzer SR params
ApplyVSRChangesToDefaultDetector(meas);
}
else // it is an INCC5 analysis driven with LM data
{
// prepare or identify an active CA entry with matching CA gatewidth and FA, and has the same SR params as the detector
if (meas.AnalysisParams.PrepareMatchingVSR(meas.Detector.MultiplicityParams))
{
CentralizedState.App.LMBD.UpdateCounters(meas.Detector.Id.DetectorName, meas.AnalysisParams); // added one, save it
}
}
}
else // construct param key source with the single mkey entry point
{
// prepare analyzer params from detector SR params
meas.AnalysisParams = CentralizedState.App.LMBD.CountingParameters(meas.Detector, applySRFromDetector: false);
if (!meas.AnalysisParams.Exists(w => { return((w is Multiplicity) && (w as Multiplicity).Equals(meas.Detector.MultiplicityParams)); }))
{
meas.AnalysisParams.Add(meas.Detector.MultiplicityParams);
}
}
// get the current INCC5 analysis methods
if (useCurCalibParams || meas.INCCAnalysisState == null)
{
meas.INCCAnalysisState = new INCCAnalysisState();
INCCSelector sel = new INCCSelector(meas.AcquireState.detector_id, meas.AcquireState.item_type);
AnalysisMethods am;
bool found = CentralizedState.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out am);
if (found)
{
am.selector = sel; // gotta do this so that the equality operator is not incorrect
meas.INCCAnalysisState.Methods = am;
}
else
{
meas.INCCAnalysisState.Methods = new AnalysisMethods(sel);
}
} // else use what was there
meas.InitializeContext(clearCounterResults: true);
meas.PrepareINCCResults();
// stratum look up, finds existing stratum by name
if (useCurCalibParams || meas.Stratum == null)
{
List <INCCDB.StratumDescriptor> sl = CentralizedState.App.DB.StrataList();
INCCDB.StratumDescriptor s = sl.Find(w => string.Compare(w.Desc.Name, meas.AcquireState.stratum_id.Name, true) == 0);
if (s == null)
{
meas.Stratum = new Stratum();
}
else
{
meas.Stratum = new Stratum(s.Stratum);
}
}
INCCResults.results_rec xres = new INCCResults.results_rec(meas);
meas.INCCAnalysisResults.TradResultsRec = xres;
CentralizedState.App.Opstate.Measurement = meas; // put the measurement definition on the global state
}
public unsafe bool BuildMeasurement(INCCTransferFile itf, int num)
{
bool overwrite = NC.App.AppContext.OverwriteImportedDefs;
results_rec results = itf.results_rec_list[0];
meas_id id;
TransferUtils.Copy(results.meas_date, 0, id.meas_date, 0, INCC.DATE_TIME_LENGTH);
TransferUtils.Copy(results.meas_time, 0, id.meas_time, 0, INCC.DATE_TIME_LENGTH);
TransferUtils.Copy(results.filename, 0, id.filename, 0, INCC.FILE_NAME_LENGTH);
TransferUtils.Copy(results.results_detector_id, 0, id.results_detector_id, 0, INCC.MAX_DETECTOR_ID_LENGTH);
DateTime dt = INCC.DateTimeFrom(TransferUtils.str(id.meas_date, INCC.DATE_TIME_LENGTH), TransferUtils.str(id.meas_time, INCC.DATE_TIME_LENGTH));
// do not use content from last BuildDetector call, instead look up the detector on the pre-existing list
string detname = TransferUtils.str(id.results_detector_id, INCC.MAX_DETECTOR_ID_LENGTH);
Detector det = NC.App.DB.Detectors.GetItByDetectorId(detname);
if (det == null)
{
mlogger.TraceEvent(LogLevels.Error, 34087, "Unknown detector '{0}', not importing this measurement {1}", detname, dt.ToString("s"));
return false;
}
meas = new Measurement((AssaySelector.MeasurementOption)results.meas_option, mlogger);
// TODO: update detector details from this meas result, since there could be a difference
meas.MeasurementId.MeasDateTime = dt;
meas.MeasurementId.FileName = TransferUtils.str(id.filename, INCC.FILE_NAME_LENGTH);
meas.Detectors.Add(det); // in practice this is a list with one element, e.g. meas.Detector
TestParameters t = new TestParameters();
t.accSnglTestRateLimit = results.r_acc_sngl_test_rate_limit;
t.accSnglTestPrecisionLimit = results.r_acc_sngl_test_precision_limit;
t.accSnglTestOutlierLimit = results.r_acc_sngl_test_outlier_limit;
t.outlierTestLimit = results.r_outlier_test_limit;
t.bkgDoublesRateLimit = results.r_bkg_doubles_rate_limit;
t.bkgTriplesRateLimit = results.r_bkg_triples_rate_limit;
t.chiSquaredLimit = results.r_chisq_limit;
t.maxNumFailures = results.r_max_num_failures;
t.highVoltageTestLimit = results.r_high_voltage_test_limit;
t.normalBackupAssayTestLimit = results.r_normal_backup_assay_test_lim;
t.maxCyclesForOutlierTest = (uint)results.r_max_runs_for_outlier_test;
t.checksum = (results.r_checksum_test == 0.0 ? false : true);
t.accidentalsMethod = INCCAccidentalsMethod((int)results.results_accidentals_method);
meas.Tests.Copy(t);
NormParameters n = NC.App.DB.NormParameters.Get(detname);
meas.Norm.Copy(n);
BackgroundParameters b = NC.App.DB.BackgroundParameters.Get(detname);
meas.Background.Copy(b);
// DB write for these occurs at end of processing here
// Isotopics handled in this block
if (itf.isotopics_table.Count > 0)
{
string isoname = TransferUtils.str(results.item_isotopics_id, INCC.MAX_ISOTOPICS_ID_LENGTH);
NCCTransfer.isotopics_rec isotopics = itf.isotopics_table[0];
//bool first = true; // forgot why the code does this, to put the default in the map?
// foreach (LMTransfer.isotopics_rec ir in itf.istopics_table)
// {
AnalysisDefs.Isotopics iso;
// if (first)
iso = meas.Isotopics;
// else
// iso = new Isotopics();
// first = false;
iso.am_date = INCC.DateFrom(TransferUtils.str(isotopics.am_date, INCC.DATE_TIME_LENGTH));
iso.pu_date = INCC.DateFrom(TransferUtils.str(isotopics.pu_date, INCC.DATE_TIME_LENGTH));
iso.id = TransferUtils.str(isotopics.isotopics_id, INCC.MAX_ISOTOPICS_ID_LENGTH);
AnalysisDefs.Isotopics.SourceCode checksc = AnalysisDefs.Isotopics.SourceCode.OD;
string check = TransferUtils.str(isotopics.isotopics_source_code, INCC.ISO_SOURCE_CODE_LENGTH);
bool okparse = Enum.TryParse(check, true, out checksc);
iso.source_code = checksc;
iso.SetValueError(Isotope.am241, isotopics.am241, isotopics.am241_err);
iso.SetValueError(Isotope.pu238, isotopics.pu238, isotopics.pu238_err);
iso.SetValueError(Isotope.pu239, isotopics.pu239, isotopics.pu239_err);
iso.SetValueError(Isotope.pu240, isotopics.pu240, isotopics.pu240_err);
iso.SetValueError(Isotope.pu241, isotopics.pu241, isotopics.pu241_err);
iso.SetValueError(Isotope.pu242, isotopics.pu242, isotopics.pu242_err);
if (!NC.App.DB.Isotopics.Has(iso.id))
{
NC.App.DB.Isotopics.GetList().Add(iso);
mlogger.TraceEvent(LogLevels.Info, 34021, "Identified new isotopics {0}", iso.id);
}
else
{
if (overwrite)
{
NC.App.DB.Isotopics.Replace(iso);
mlogger.TraceEvent(LogLevels.Warning, 34022, "Replaced existing isotopics {0}", iso.id);
}
else
{
mlogger.TraceEvent(LogLevels.Warning, 34022, "Not replacing existing isotopics {0}", iso.id);
}
}
iso.modified = true;
}
AcquireParameters acq = meas.AcquireState;
acq.detector_id = det.Id.DetectorId;
acq.meas_detector_id = string.Copy(det.Id.DetectorId); // probably incorrect usage, but differnce is ambiguous in INCC5
acq.item_type = TransferUtils.str(results.results_item_type, INCC.MAX_ITEM_TYPE_LENGTH);
acq.qc_tests = TransferUtils.ByteBool(results.results_qc_tests);
acq.user_id = TransferUtils.str(results.user_id, INCC.CHAR_FIELD_LENGTH);
acq.num_runs = results.total_number_runs;
if (results.number_good_runs > 0)
acq.run_count_time = results.total_good_count_time / results.number_good_runs;
else
acq.run_count_time = results.total_good_count_time; // should be 0.0 by default for this special case
acq.MeasDateTime = meas.MeasurementId.MeasDateTime;
acq.error_calc_method = INCCErrorCalculationTechnique(results.error_calc_method);
acq.campaign_id = TransferUtils.str(results.results_campaign_id, INCC.MAX_CAMPAIGN_ID_LENGTH);
if (string.IsNullOrEmpty(acq.campaign_id))
acq.campaign_id = TransferUtils.str(results.results_inspection_number, INCC.MAX_CAMPAIGN_ID_LENGTH);
acq.comment = TransferUtils.str(results.comment, INCC.MAX_COMMENT_LENGTH);//"Original file name " + meas.MeasurementId.FileName;
string ending_comment_str = TransferUtils.str(results.ending_comment, INCC.MAX_COMMENT_LENGTH);
acq.ending_comment = !string.IsNullOrEmpty(acq.ending_comment_str);
acq.data_src = (ConstructedSource)results.data_source;
acq.well_config = (WellConfiguration)results.well_config;
acq.print = TransferUtils.ByteBool(results.results_print);
mlogger.TraceEvent(LogLevels.Verbose, 34000, "Building {0} measurement {1} '{2},{3}' from {2}", meas.MeasOption.PrintName(), num, acq.detector_id, acq.item_type, itf.Path);
if (itf.facility_table.Count > 0)
meas.AcquireState.facility = new INCCDB.Descriptor(string.Copy(itf.facility_table[0].id), string.Copy(itf.facility_table[0].desc));
if (itf.mba_table.Count > 0)
meas.AcquireState.mba = new INCCDB.Descriptor(string.Copy(itf.mba_table[0].id), string.Copy(itf.mba_table[0].desc));
if (itf.stratum_id_names_rec_table.Count > 0)
meas.AcquireState.stratum_id = new INCCDB.Descriptor(string.Copy(itf.stratum_id_names_rec_table[0].id), string.Copy(itf.stratum_id_names_rec_table[0].desc));
// stratum values
meas.Stratum = new Stratum();
meas.Stratum.bias_uncertainty = results.bias_uncertainty;
meas.Stratum.random_uncertainty = results.random_uncertainty;
meas.Stratum.relative_std_dev = results.relative_std_dev;
meas.Stratum.systematic_uncertainty = results.systematic_uncertainty;
INCCDB.Descriptor mtdesc = new INCCDB.Descriptor(string.Copy(acq.item_type), string.Empty);
if (!NC.App.DB.Materials.Has(mtdesc) || overwrite)
{
NC.App.DB.Materials.Update(mtdesc);
}
// prepare norm parms, should be done with a prior pass with the detector file, then this code looks it up in the collection set at this point in the processing
meas.Norm.currNormalizationConstant.v = results.normalization_constant;
meas.Norm.currNormalizationConstant.err = results.normalization_constant_err;
foreach (DescriptorPair dp in itf.facility_table)
{
INCCDB.Descriptor idesc = new INCCDB.Descriptor(string.Copy(dp.id), string.Copy(dp.desc));
if (!NC.App.DB.Facilities.Has(idesc) || overwrite)
{
idesc.modified = true;
NC.App.DB.Facilities.Update(idesc);
}
}
foreach (DescriptorPair dp in itf.mba_table)
{
INCCDB.Descriptor idesc = new INCCDB.Descriptor(string.Copy(dp.id), string.Copy(dp.desc));
if (!NC.App.DB.MBAs.Has(idesc) || overwrite)
{
idesc.modified = true;
NC.App.DB.MBAs.Update(idesc);
}
}
foreach (DescriptorPair dp in itf.stratum_id_names_rec_table)
{
INCCDB.Descriptor idesc = new INCCDB.Descriptor(string.Copy(dp.id), string.Copy(dp.desc));
if (meas.Stratum != null)
{
idesc.modified = true;
NC.App.DB.UpdateStratum(idesc, meas.Stratum); // creates it
NC.App.DB.AssociateStratum(det, idesc, meas.Stratum); // associates it with the detector
}
}
if (itf.item_id_table.Count > 0) // devnote: there should be only one item entry
{
ItemId item = new ItemId();
item.declaredMass = results.declared_mass;
item.declaredUMass = results.declared_u_mass;
item.length = results.length;
item.IOCode = TransferUtils.str(results.io_code, INCC.IO_CODE_LENGTH);
item.inventoryChangeCode = TransferUtils.str(results.inventory_change_code, INCC.INVENTORY_CHG_LENGTH);
item.isotopics = TransferUtils.str(results.item_isotopics_id, INCC.MAX_ISOTOPICS_ID_LENGTH);
item.stratum = TransferUtils.str(results.stratum_id, INCC.MAX_STRATUM_ID_LENGTH);
item.item = TransferUtils.str(results.item_id, INCC.MAX_ITEM_ID_LENGTH);
item.material = TransferUtils.str(results.results_item_type, INCC.MAX_ITEM_TYPE_LENGTH);
//copy measurement dates to item
item.pu_date = new DateTime(meas.Isotopics.pu_date.Ticks);
item.am_date = new DateTime(meas.Isotopics.am_date.Ticks);
item.modified = true;
List<ItemId> list = NC.App.DB.ItemIds.GetList();
bool flump = list.Exists(i => { return string.Compare(item.item, i.item, true) == 0; });
if (flump && overwrite)
{
list.Remove(item);
list.Add(item);
}
else
list.Add(item);
// fill in the acquire record from the item id
acq.ApplyItemId(item);
meas.MeasurementId.Item = new ItemId(item);
}
meas.INCCAnalysisState = new INCCAnalysisState();
INCCSelector sel = new INCCSelector(acq.detector_id, acq.item_type);
AnalysisMethods am;
bool found = NC.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out am);
if (found)
{
meas.INCCAnalysisState.Methods = am;
meas.INCCAnalysisState.Methods.selector = sel;
}
else
{
mlogger.TraceEvent(LogLevels.Error, 34063, "No analysis methods for {0}, (calibration information is missing), creating placeholders", sel.ToString()); // devnote: can get missing paramters from the meas results for calib and verif below, so need to visit this condition after results processing below (newres.methodParams!) and reconstruct the calib parameters.
meas.INCCAnalysisState.Methods = new AnalysisMethods(mlogger);
meas.INCCAnalysisState.Methods.selector = sel;
}
// prepare analyzer params from sr params above
meas.AnalysisParams = new AnalysisDefs.CountingAnalysisParameters();
meas.AnalysisParams.Add(det.MultiplicityParams);
mlogger.TraceEvent(LogLevels.Verbose, 34030, "Transferring the {0} cycles", itf.run_rec_list.Count);
meas.InitializeContext();
meas.PrepareINCCResults(); // prepares INCCResults objects
ulong MaxBins = 0;
foreach (run_rec r in itf.run_rec_list)
{
ulong x= AddToCycleList(r, det);
if (x > MaxBins)
MaxBins = x;
}
for (int cf = 1; (itf.CFrun_rec_list != null) && (cf < itf.CFrun_rec_list.Length); cf++)
{
foreach (run_rec r in itf.CFrun_rec_list[cf])
{
AddToCycleList(r, det, cf);
}
}
// summarize the result in the result, if you know what I mean
MultiplicityCountingRes mcr = (MultiplicityCountingRes)meas.CountingAnalysisResults[det.MultiplicityParams];
for (int i = 0; i < 9; i++)
mcr.covariance_matrix[i] = results.covariance_matrix[i];
mcr.DeadtimeCorrectedRates.Singles.err = results.singles_err;
mcr.DeadtimeCorrectedRates.Doubles.err = results.doubles_err;
mcr.DeadtimeCorrectedRates.Triples.err = results.triples_err;
mcr.DeadtimeCorrectedRates.Singles.v = results.singles;
mcr.DeadtimeCorrectedRates.Doubles.v = results.doubles;
mcr.DeadtimeCorrectedRates.Triples.v = results.triples;
mcr.Scaler1Rate.v = results.scaler1;
mcr.Scaler2Rate.v = results.scaler2;
mcr.Scaler1Rate.err = results.scaler1_err;
mcr.Scaler2Rate.err = results.scaler2_err;
mcr.Scaler1.v = results.scaler1;
mcr.Scaler2.v = results.scaler2;
mcr.Scaler1.err = results.scaler1_err;
mcr.Scaler2.err = results.scaler2_err;
mcr.ASum = results.acc_sum;
mcr.RASum = results.reals_plus_acc_sum;
mcr.S1Sum = results.scaler1_sum;
mcr.S2Sum = results.scaler2_sum;
mcr.mass = results.declared_mass;
mcr.FA = det.MultiplicityParams.FA;
mcr.RAMult = TransferUtils.multarrayxfer(results.mult_reals_plus_acc_sum, INCC.MULTI_ARRAY_SIZE);
mcr.NormedAMult = TransferUtils.multarrayxfer(results.mult_acc_sum, INCC.MULTI_ARRAY_SIZE);
mcr.MaxBins = (ulong)Math.Max(mcr.RAMult.Length, mcr.NormedAMult.Length);
mcr.MinBins = (ulong)Math.Min(mcr.RAMult.Length, mcr.NormedAMult.Length);
mcr.RawDoublesRate.v = results.uncorrected_doubles;
mcr.RawDoublesRate.err = results.uncorrected_doubles_err;
mcr.singles_multi = results.singles_multi;
mcr.doubles_multi = results.doubles_multi;
mcr.triples_multi = results.triples_multi;
INCCResult result;
MeasOptionSelector mos = new MeasOptionSelector(meas.MeasOption, det.MultiplicityParams);
result = meas.INCCAnalysisState.Lookup(mos);
result.DeadtimeCorrectedRates.Singles.err = results.singles_err;
result.DeadtimeCorrectedRates.Doubles.err = results.doubles_err;
result.DeadtimeCorrectedRates.Triples.err = results.triples_err;
result.DeadtimeCorrectedRates.Singles.v = results.singles;
result.DeadtimeCorrectedRates.Doubles.v = results.doubles;
result.DeadtimeCorrectedRates.Triples.v = results.triples;
result.rates.RawRates.Scaler1s.v = results.scaler1;
result.rates.RawRates.Scaler2s.v = results.scaler2;
result.rates.RawRates.Scaler1s.err = results.scaler1_err;
result.rates.RawRates.Scaler2s.err = results.scaler2_err;
result.S1Sum = results.scaler1_sum;
result.S2Sum = results.scaler2_sum;
result.ASum = results.acc_sum;
result.RASum = results.reals_plus_acc_sum;
result.RAMult = TransferUtils.multarrayxfer(results.mult_reals_plus_acc_sum, INCC.MULTI_ARRAY_SIZE);
result.NormedAMult = TransferUtils.multarrayxfer(results.mult_acc_sum, INCC.MULTI_ARRAY_SIZE);
result.MaxBins = (ulong)Math.Max(result.RAMult.Length, result.NormedAMult.Length);
result.MinBins = (ulong)Math.Min(result.RAMult.Length, result.NormedAMult.Length);
mcr.RawDoublesRate.v = results.uncorrected_doubles;
mcr.RawDoublesRate.err = results.uncorrected_doubles_err;
result.singles_multi = results.singles_multi;
result.doubles_multi = results.doubles_multi;
result.triples_multi = results.triples_multi;
// hack expansion of Normed mult array to same length as Acc mult array on each cycle to accomodate TheoreticalOutlier calc array length bug
ExpandMaxBins(MaxBins, meas.Cycles, det.MultiplicityParams);
Bloat(MaxBins, mcr);
List<MeasurementMsg> msgs = meas.GetMessageList(det.MultiplicityParams);
// move the error messages
for (int i = 0; i < INCC.NUM_ERROR_MSG_CODES; i++)
{
int index = i * INCC.ERR_MSG_LENGTH;
string e = TransferUtils.str(results.error_msg_codes + index, INCC.ERR_MSG_LENGTH);
if (e.Length > 0)
meas.AddMessage(msgs, LogLevels.Error, 911, e, meas.MeasurementId.MeasDateTime);
}
// move the warning messages
for (int i = 0; i < INCC.NUM_WARNING_MSG_CODES; i++)
{
int index = i * INCC.ERR_MSG_LENGTH;
string w = TransferUtils.str(results.warning_msg_codes + index, INCC.ERR_MSG_LENGTH);
if (w.Length > 0)
meas.AddMessage(msgs, LogLevels.Warning, 411, w, meas.MeasurementId.MeasDateTime);
}
#region results transfer
INCCMethodResults imr;
bool got = meas.INCCAnalysisResults.TryGetINCCResults(det.MultiplicityParams, out imr); // only ever this single mkey for INCC5-style transfer import, (thankfully)
if (got)
imr.primaryMethod = OldToNewMethodId(results.primary_analysis_method);
// check these results against the meas.MeasOption expectation => seems to always be 1 - 1 with (opt, sr) -> results, and subresults only for verif and calib choice
// rates -> none,
// bkg -> bkg, norm -> bias, init src -> init src, prec -> prec,
// calib -> calib, 1 or more INCC methods on the methods submap
// verif -> 1 or more INCC methods on the methods submap
foreach (iresultsbase r in itf.method_results_list)
{
if (r is results_init_src_rec)
{
mlogger.TraceEvent(LogLevels.Verbose, 34041, ("Transferring initial source results"));
results_init_src_rec oldres = (results_init_src_rec)r;
INCCResults.results_init_src_rec newres = (INCCResults.results_init_src_rec)
meas.INCCAnalysisState.Lookup(new MeasOptionSelector(meas.MeasOption, det.MultiplicityParams), typeof(INCCResults.results_init_src_rec));
newres.mode = OldToNewBiasTestId(oldres.init_src_mode);
newres.pass = TransferUtils.PassCheck(oldres.init_src_pass_fail);
newres.init_src_id = TransferUtils.str(oldres.init_src_id, INCC.SOURCE_ID_LENGTH);
}
else if (r is results_bias_rec)
{
mlogger.TraceEvent(LogLevels.Verbose, 34042, ("Transferring normalization results"));
results_bias_rec oldres = (results_bias_rec)r;
INCCResults.results_bias_rec newres = (INCCResults.results_bias_rec)meas.INCCAnalysisState.Lookup(new MeasOptionSelector(meas.MeasOption, det.MultiplicityParams), typeof(INCCResults.results_bias_rec));
newres.pass = TransferUtils.PassCheck(oldres.bias_pass_fail);
newres.biasDblsRateExpect.v = oldres.bias_dbls_rate_expect;
newres.biasDblsRateExpectMeas.v = oldres.bias_dbls_rate_expect_meas;
newres.biasSnglsRateExpect.v = oldres.bias_sngls_rate_expect;
newres.biasSnglsRateExpectMeas.v = oldres.bias_sngls_rate_expect_meas;
newres.biasDblsRateExpect.err = oldres.bias_dbls_rate_expect_err;
newres.biasDblsRateExpectMeas.err = oldres.bias_dbls_rate_expect_meas_err;
newres.biasSnglsRateExpect.err = oldres.bias_sngls_rate_expect_err;
newres.biasSnglsRateExpectMeas.err = oldres.bias_sngls_rate_expect_meas_err;
newres.newNormConstant.v = oldres.new_norm_constant;
newres.newNormConstant.err = oldres.new_norm_constant_err;
newres.measPrecision = oldres.meas_precision;
newres.requiredMeasSeconds = oldres.required_meas_seconds;
newres.requiredPrecision = oldres.required_precision;
newres.mode = OldToNewBiasTestId(oldres.results_bias_mode);
newres.sourceId = TransferUtils.str(oldres.bias_source_id, INCC.SOURCE_ID_LENGTH);
// NEXT: for init src and bias, results norm values transferred to meas.norm
}
else if (r is results_precision_rec)
{
mlogger.TraceEvent(LogLevels.Verbose, 34043, ("Transferring precision results"));
results_precision_rec oldres = (results_precision_rec)r;
INCCResults.results_precision_rec newres =
(INCCResults.results_precision_rec)meas.INCCAnalysisState.Lookup(new MeasOptionSelector(meas.MeasOption, det.MultiplicityParams), typeof(INCCResults.results_precision_rec));
newres.chiSqLowerLimit = oldres.chi_sq_lower_limit;
newres.chiSqUpperLimit = oldres.chi_sq_upper_limit;
newres.precChiSq = oldres.prec_chi_sq;
newres.precSampleVar = oldres.prec_sample_var;
newres.precTheoreticalVar = oldres.prec_theoretical_var;
newres.pass = TransferUtils.PassCheck(oldres.prec_pass_fail);
}
else
{
if (r is results_cal_curve_rec)
{
// need to look up in existing map and see if it is there and then create and load it if not
mlogger.TraceEvent(LogLevels.Verbose, 34050, ("Transferring method results for " + r.GetType().ToString()));
results_cal_curve_rec oldres = (results_cal_curve_rec)r;
INCCMethodResults.results_cal_curve_rec newres =
(INCCMethodResults.results_cal_curve_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.CalibrationCurve, true);
newres.pu240e_mass = new Tuple(oldres.cc_pu240e_mass, oldres.cc_pu240e_mass_err);
newres.pu_mass = new Tuple(oldres.cc_pu_mass, oldres.cc_pu_mass_err);
newres.dcl_pu240e_mass = oldres.cc_dcl_pu240e_mass;
newres.dcl_pu_mass = oldres.cc_dcl_pu_mass;
newres.dcl_minus_asy_pu_mass = new Tuple(oldres.cc_dcl_minus_asy_pu_mass, oldres.cc_dcl_minus_asy_pu_mass_err);
newres.dcl_minus_asy_pu_mass_pct = oldres.cc_dcl_minus_asy_pu_mass_pct;
newres.pass = TransferUtils.PassCheck(oldres.cc_pass_fail);
newres.dcl_u_mass = oldres.cc_dcl_u_mass;
newres.length = oldres.cc_length;
newres.heavy_metal_content = oldres.cc_heavy_metal_content;
newres.heavy_metal_correction = oldres.cc_heavy_metal_correction;
newres.heavy_metal_corr_singles = new Tuple(oldres.cc_heavy_metal_corr_singles, oldres.cc_heavy_metal_corr_singles_err);
newres.heavy_metal_corr_doubles = new Tuple(oldres.cc_heavy_metal_corr_doubles, oldres.cc_heavy_metal_corr_doubles_err);
newres.methodParams.heavy_metal_corr_factor = oldres.cc_heavy_metal_corr_factor_res;
newres.methodParams.heavy_metal_reference = oldres.cc_heavy_metal_reference_res;
// newres.methodParams.cev.lower_mass_limit = oldres.cc_lower_mass_limit_res;
// newres.methodParams.cev.upper_mass_limit = oldres.cc_upper_mass_limit_res;
newres.methodParams.percent_u235 = oldres.cc_percent_u235_res;
newres.methodParams.cev.a = oldres.cc_a_res; newres.methodParams.cev.b = oldres.cc_b_res;
newres.methodParams.cev.c = oldres.cc_c_res; newres.methodParams.cev.d = oldres.cc_d_res;
newres.methodParams.cev.var_a = oldres.cc_var_a_res; newres.methodParams.cev.var_b = oldres.cc_var_b_res;
newres.methodParams.cev.var_c = oldres.cc_var_c_res; newres.methodParams.cev.var_d = oldres.cc_var_d_res;
newres.methodParams.cev.setcovar(Coeff.a,Coeff.b,oldres.cc_covar_ab_res);
newres.methodParams.cev._covar[0, 2] = oldres.cc_covar_ac_res;
newres.methodParams.cev._covar[0, 3] = oldres.cc_covar_ad_res;
newres.methodParams.cev._covar[1, 2] = oldres.cc_covar_bc_res;
newres.methodParams.cev._covar[1, 3] = oldres.cc_covar_bd_res;
newres.methodParams.cev._covar[2, 3] = oldres.cc_covar_cd_res;
newres.methodParams.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)oldres.cc_cal_curve_equation;
newres.methodParams.CalCurveType = (INCCAnalysisParams.CalCurveType)oldres.cc_cal_curve_type_res;
newres.methodParams.cev.sigma_x = oldres.cc_sigma_x_res;
}
else if (r is results_known_alpha_rec)
{
// need to look up in existing map and see if it is there and then create and load it if not
mlogger.TraceEvent(LogLevels.Verbose, 34051, ("Transferring method results for " + r.GetType().ToString()));
results_known_alpha_rec oldres = (results_known_alpha_rec)r;
INCCMethodResults.results_known_alpha_rec newres =
(INCCMethodResults.results_known_alpha_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.KnownA, true);
newres.corr_doubles.v = oldres.ka_corr_doubles;
newres.corr_doubles.err = oldres.ka_corr_doubles_err;
newres.mult = oldres.ka_mult;
newres.alphaK = oldres.ka_alpha;
newres.mult_corr_doubles = new Tuple(oldres.ka_mult_corr_doubles, oldres.ka_mult_corr_doubles_err);
newres.pu240e_mass = new Tuple(oldres.ka_pu240e_mass, oldres.ka_pu240e_mass_err);
newres.pu_mass = new Tuple(oldres.ka_pu_mass, oldres.ka_pu_mass_err);
newres.dcl_pu240e_mass = oldres.ka_dcl_pu240e_mass;
newres.dcl_pu_mass = oldres.ka_dcl_pu_mass;
newres.dcl_minus_asy_pu_mass = new Tuple(oldres.ka_dcl_minus_asy_pu_mass, oldres.ka_dcl_minus_asy_pu_mass_err);
newres.dcl_minus_asy_pu_mass_pct = oldres.ka_dcl_minus_asy_pu_mass_pct;
newres.pass = TransferUtils.PassCheck(oldres.ka_pass_fail);
newres.dcl_u_mass = oldres.ka_dcl_u_mass;
newres.length = oldres.ka_length;
newres.heavy_metal_content = oldres.ka_heavy_metal_content;
newres.heavy_metal_correction = oldres.ka_heavy_metal_correction;
newres.corr_singles = new Tuple(oldres.ka_corr_singles, oldres.ka_corr_singles_err);
newres.corr_doubles = new Tuple(oldres.ka_corr_doubles, oldres.ka_corr_doubles_err);
newres.corr_factor = oldres.ka_corr_factor;
newres.dry_alpha_or_mult_dbls = oldres.ka_dry_alpha_or_mult_dbls;
newres.upper_corr_factor_limit = oldres.ka_upper_corr_factor_limit_res;
newres.lower_corr_factor_limit = oldres.ka_lower_corr_factor_limit_res;
newres.methodParams = new INCCAnalysisParams.known_alpha_rec();
newres.methodParams.alpha_wt = oldres.ka_alpha_wt_res;
newres.methodParams.heavy_metal_corr_factor = oldres.ka_heavy_metal_corr_factor_res;
newres.methodParams.heavy_metal_reference = oldres.ka_heavy_metal_reference_res;
newres.methodParams.k = oldres.ka_k_res;
newres.methodParams.known_alpha_type = (INCCAnalysisParams.KnownAlphaVariant)oldres.ka_known_alpha_type_res;
newres.methodParams.lower_corr_factor_limit = oldres.ka_lower_corr_factor_limit_res;
newres.methodParams.upper_corr_factor_limit = oldres.ka_upper_corr_factor_limit_res;
newres.methodParams.rho_zero = oldres.ka_rho_zero_res;
newres.methodParams.ring_ratio.cal_curve_equation = (INCCAnalysisParams.CurveEquation)oldres.ka_ring_ratio_equation_res;
newres.methodParams.ring_ratio.a = oldres.ka_ring_ratio_a_res;
newres.methodParams.ring_ratio.b = oldres.ka_ring_ratio_b_res;
newres.methodParams.ring_ratio.c = oldres.ka_ring_ratio_c_res;
newres.methodParams.ring_ratio.d = oldres.ka_ring_ratio_d_res;
newres.methodParams.cev.a = oldres.ka_a_res;
newres.methodParams.cev.b = oldres.ka_b_res;
newres.methodParams.cev.var_a = oldres.ka_var_a_res;
newres.methodParams.cev.var_b= oldres.ka_var_b_res;
newres.methodParams.cev.sigma_x = oldres.ka_sigma_x_res;
newres.methodParams.cev.setcovar(Coeff.a, Coeff.b, oldres.ka_covar_ab_res);
newres.methodParams.cev.lower_mass_limit = oldres.ka_lower_corr_factor_limit_res;
newres.methodParams.cev.upper_mass_limit = oldres.ka_upper_corr_factor_limit_res;
}
else if (r is results_multiplicity_rec)
{
mlogger.TraceEvent(LogLevels.Verbose, 34052, ("Transferring method results for " + r.GetType().ToString()));
results_multiplicity_rec oldres = (results_multiplicity_rec)r;
INCCMethodResults.results_multiplicity_rec newres =
(INCCMethodResults.results_multiplicity_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.Multiplicity, true);
newres.solve_efficiency_choice = (INCCAnalysisParams.MultChoice)oldres.mul_solve_efficiency_res;
newres.pass = TransferUtils.PassCheck(oldres.mul_pass_fail);
newres.efficiencyComputed.v = oldres.mul_efficiency; newres.efficiencyComputed.err = oldres.mul_efficiency_err;
newres.mult.v = oldres.mul_mult; newres.mult.err = oldres.mul_mult_err;
newres.alphaK.v = oldres.mul_alpha; newres.alphaK.err = oldres.mul_alpha_err;
newres.corr_factor.v = oldres.mul_corr_factor; newres.corr_factor.err = oldres.mul_corr_factor_err;
newres.pu240e_mass.v = oldres.mul_pu240e_mass; newres.pu240e_mass.err = oldres.mul_pu240e_mass_err;
newres.pu_mass.v = oldres.mul_pu_mass; newres.pu_mass.err = oldres.mul_pu_mass_err;
newres.dcl_minus_asy_pu_mass.v = oldres.mul_dcl_minus_asy_pu_mass; newres.dcl_minus_asy_pu_mass.err = oldres.mul_dcl_minus_asy_pu_mass_err;
newres.dcl_pu240e_mass = oldres.mul_dcl_pu240e_mass;
newres.dcl_pu_mass = oldres.mul_dcl_pu_mass;
newres.dcl_minus_asy_pu_mass_pct = oldres.mul_dcl_minus_asy_pu_mass_pct;
newres.methodParams = new INCCAnalysisParams.multiplicity_rec();
newres.methodParams.sf_rate = oldres.mul_sf_rate_res;
newres.methodParams.vs1 = oldres.mul_vs1_res;
newres.methodParams.vs2 = oldres.mul_vs2_res;
newres.methodParams.vs3 = oldres.mul_vs3_res;
newres.methodParams.vi1 = oldres.mul_vi1_res;
newres.methodParams.vi2 = oldres.mul_vi2_res;
newres.methodParams.vi3 = oldres.mul_vi3_res;
newres.methodParams.a = oldres.mul_a_res;
newres.methodParams.b = oldres.mul_b_res;
newres.methodParams.c = oldres.mul_b_res;
newres.methodParams.sigma_x = oldres.mul_sigma_x_res;
newres.methodParams.alpha_weight = oldres.mul_alpha_weight_res;
newres.methodParams.multEffCorFactor = oldres.mul_corr_factor;
}
else if (r is results_truncated_mult_rec)
{
mlogger.TraceEvent(LogLevels.Verbose, 34053, ("Transferring method results for " + r.GetType().ToString()));
results_truncated_mult_rec oldres = (results_truncated_mult_rec)r;
INCCMethodResults.results_truncated_mult_rec newres =
(INCCMethodResults.results_truncated_mult_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.TruncatedMultiplicity, true);
newres.k.pass = TransferUtils.PassCheck(oldres.tm_k_pass_fail);
newres.bkg.Singles.v = oldres.tm_bkg_singles;
newres.bkg.Singles.err = oldres.tm_bkg_singles_err;
newres.bkg.Zeros.v = oldres.tm_bkg_zeros;
newres.bkg.Zeros.err = oldres.tm_bkg_zeros_err;
newres.bkg.Ones.v = oldres.tm_bkg_ones;
newres.bkg.Ones.err = oldres.tm_bkg_ones_err;
newres.bkg.Twos.v = oldres.tm_bkg_twos;
newres.bkg.Twos.err = oldres.tm_bkg_twos_err;
newres.net.Singles.v = oldres.tm_net_singles;
newres.net.Singles.err = oldres.tm_net_singles_err;
newres.net.Zeros.v = oldres.tm_net_zeros;
newres.net.Zeros.err = oldres.tm_net_zeros_err;
newres.net.Ones.v = oldres.tm_net_ones;
newres.net.Ones.err = oldres.tm_net_ones_err;
newres.net.Twos.v = oldres.tm_net_twos;
newres.net.Twos.err = oldres.tm_net_twos_err;
newres.k.alpha.v = oldres.tm_k_alpha;
newres.k.alpha.err = oldres.tm_k_alpha_err;
newres.k.pu_mass.v = oldres.tm_k_pu_mass;
newres.k.pu_mass.err = oldres.tm_k_pu_mass_err;
newres.k.pu240e_mass.v = oldres.tm_k_pu240e_mass;
newres.k.pu240e_mass.err = oldres.tm_k_pu240e_mass_err;
newres.k.dcl_minus_asy_pu_mass.v = oldres.tm_k_dcl_minus_asy_pu_mass;
newres.k.dcl_minus_asy_pu_mass.err = oldres.tm_k_dcl_minus_asy_pu_mass_err;
newres.s.alpha.v = oldres.tm_s_alpha;
newres.s.alpha.err = oldres.tm_s_alpha_err;
newres.s.pu_mass.v = oldres.tm_s_pu_mass;
newres.s.pu_mass.err = oldres.tm_s_pu_mass_err;
newres.s.pu240e_mass.v = oldres.tm_s_pu240e_mass;
newres.s.pu240e_mass.err = oldres.tm_s_pu240e_mass_err;
newres.s.dcl_minus_asy_pu_mass.v = oldres.tm_s_dcl_minus_asy_pu_mass;
newres.s.dcl_minus_asy_pu_mass.err = oldres.tm_s_dcl_minus_asy_pu_mass_err;
newres.methodParams.a = oldres.tm_a_res;
newres.methodParams.b = oldres.tm_b_res;
newres.methodParams.known_eff = (oldres.tm_known_eff_res == 0 ? false : true);
newres.methodParams.solve_eff = (oldres.tm_solve_eff_res == 0 ? false : true);
}
else if (r is results_known_m_rec)
{
// dev note: untested
mlogger.TraceEvent(LogLevels.Verbose, 34054, ("Transferring method results for " + r.GetType().ToString()));
results_known_m_rec oldres = (results_known_m_rec)r;
INCCMethodResults.results_known_m_rec newres =
(INCCMethodResults.results_known_m_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.KnownM, true);
newres.pu_mass = new Tuple(oldres.km_pu_mass, oldres.km_pu_mass_err);
newres.pu240e_mass = new Tuple(oldres.km_pu240e_mass, oldres.km_pu240e_mass);
newres.alpha = oldres.km_alpha;
newres.mult = oldres.km_mult;
newres.dcl_minus_asy_pu_mass = new Tuple(oldres.km_dcl_minus_asy_pu_mass, oldres.km_dcl_minus_asy_pu_mass_err);
newres.pu239e_mass = oldres.km_pu240e_mass;
newres.dcl_pu240e_mass = oldres.km_dcl_pu240e_mass;
newres.dcl_pu_mass = oldres.km_dcl_pu_mass;
newres.dcl_minus_asy_pu_mass_pct = oldres.km_dcl_minus_asy_pu_mass_pct;
newres.pass = TransferUtils.PassCheck(oldres.km_pass_fail);
newres.methodParams.b = oldres.km_b_res;
newres.methodParams.c = oldres.km_c_res;
newres.methodParams.sf_rate = oldres.km_sf_rate_res;
newres.methodParams.sigma_x = oldres.km_sigma_x_res;
newres.methodParams.vs1 = oldres.km_vs1_res;
newres.methodParams.vi1 = oldres.km_vi1_res;
newres.methodParams.vs2 = oldres.km_vs2_res;
newres.methodParams.vi2 = oldres.km_vi2_res;
}
else if (r is results_add_a_source_rec)
{
// dev note: untested
mlogger.TraceEvent(LogLevels.Verbose, 34055, ("Transferring method results for " + r.GetType().ToString()));
results_add_a_source_rec oldres = (results_add_a_source_rec)r;
INCCMethodResults.results_add_a_source_rec newres =
(INCCMethodResults.results_add_a_source_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.KnownM, true);
newres.pu_mass = new Tuple(oldres.ad_pu_mass, oldres.ad_pu_mass_err);
newres.pu240e_mass = new Tuple(oldres.ad_pu240e_mass, oldres.ad_pu240e_mass);
newres.dcl_minus_asy_pu_mass = new Tuple(oldres.ad_dcl_minus_asy_pu_mass, oldres.ad_dcl_minus_asy_pu_mass_err);
newres.dcl_pu240e_mass = oldres.ad_dcl_pu240e_mass;
newres.dcl_pu_mass = oldres.ad_dcl_pu_mass;
newres.dcl_minus_asy_pu_mass_pct = oldres.ad_dcl_minus_asy_pu_mass_pct;
newres.pass = TransferUtils.PassCheck(oldres.ad_pass_fail);
newres.dzero_cf252_doubles = oldres.ad_dzero_cf252_doubles;
newres.sample_avg_cf252_doubles.v = oldres.ad_sample_avg_cf252_doubles;
newres.sample_avg_cf252_doubles.err = oldres.ad_sample_avg_cf252_doubles_err;
newres.corr_doubles.v = oldres.ad_corr_doubles;
newres.corr_doubles.err = oldres.ad_corr_doubles_err;
newres.delta.v = oldres.ad_delta;
newres.delta.err = oldres.ad_delta_err;
newres.corr_factor.v = oldres.ad_corr_factor;
newres.corr_factor.err = oldres.ad_corr_factor_err;
newres.sample_cf252_ratio = TransferUtils.Copy(oldres.ad_sample_cf252_ratio, INCC.MAX_ADDASRC_POSITIONS);
newres.sample_cf252_doubles = Tuple.MakeArray(
vals: TransferUtils.Copy(oldres.ad_sample_cf252_doubles, INCC.MAX_ADDASRC_POSITIONS),
errs: TransferUtils.Copy(oldres.ad_sample_cf252_doubles_err, INCC.MAX_ADDASRC_POSITIONS));
newres.tm_doubles_bkg.v = oldres.ad_tm_doubles_bkg;
newres.tm_uncorr_doubles.v = oldres.ad_tm_uncorr_doubles;
newres.tm_corr_doubles.v = oldres.ad_corr_doubles;
newres.tm_doubles_bkg.err = oldres.ad_tm_doubles_bkg_err;
newres.tm_uncorr_doubles.err = oldres.ad_tm_uncorr_doubles_err;
newres.tm_corr_doubles.err = oldres.ad_corr_doubles_err;
newres.methodParams.cev.a = oldres.ad_a_res; newres.methodParams.cev.b = oldres.ad_b_res;
newres.methodParams.cev.c = oldres.ad_c_res; newres.methodParams.cev.d = oldres.ad_d_res;
newres.methodParams.cev.var_a = oldres.ad_var_a_res; newres.methodParams.cev.var_b = oldres.ad_var_b_res;
newres.methodParams.cev.var_c = oldres.ad_var_c_res; newres.methodParams.cev.var_d = oldres.ad_var_d_res;
newres.methodParams.cev.setcovar(Coeff.a, Coeff.b, oldres.ad_covar_ab_res);
newres.methodParams.cev._covar[0, 2] = oldres.ad_covar_ac_res;
newres.methodParams.cev._covar[0, 3] = oldres.ad_covar_ad_res;
newres.methodParams.cev._covar[1, 2] = oldres.ad_covar_bc_res;
newres.methodParams.cev._covar[1, 3] = oldres.ad_covar_bd_res;
newres.methodParams.cev._covar[2, 3] = oldres.ad_covar_cd_res;
newres.methodParams.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)oldres.ad_add_a_source_equation;
newres.methodParams.cev.sigma_x = oldres.ad_sigma_x_res;
newres.methodParams.cf.a = oldres.ad_cf_a_res; newres.methodParams.cf.b = oldres.ad_cf_b_res;
newres.methodParams.cf.c = oldres.ad_cf_c_res; newres.methodParams.cf.d = oldres.ad_cf_d_res;
newres.methodParams.dzero_avg = oldres.ad_dzero_avg_res;
newres.methodParams.num_runs = oldres.ad_num_runs_res;
newres.methodParams.tm_dbls_rate_upper_limit = oldres.ad_tm_dbls_rate_upper_limit_res;
newres.methodParams.tm_weighting_factor = oldres.ad_tm_weighting_factor_res;
newres.methodParams.use_truncated_mult = (oldres.ad_use_truncated_mult_res == 0 ? false : true);
newres.methodParams.dzero_ref_date = INCC.DateFrom(TransferUtils.str(oldres.ad_dzero_ref_date_res, INCC.DATE_TIME_LENGTH));
newres.methodParams.position_dzero = TransferUtils.Copy(oldres.ad_position_dzero_res, INCC.MAX_ADDASRC_POSITIONS);
// devnote: the original methodParams dcl_mass, doubles, min, max not preserved in INCC5 aas result rec
}
else if (r is results_curium_ratio_rec)
{
// dev note: untested
mlogger.TraceEvent(LogLevels.Verbose, 34056, ("Transferring method results for " + r.GetType().ToString()));
results_curium_ratio_rec oldres = (results_curium_ratio_rec)r;
INCCMethodResults.results_curium_ratio_rec newres = (INCCMethodResults.results_curium_ratio_rec)
meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.CuriumRatio, true);
newres.pu.pu240e_mass = new Tuple(oldres.cr_pu240e_mass, oldres.cr_pu240e_mass_err);
newres.pu.mass = new Tuple(oldres.cr_pu_mass, oldres.cr_pu_mass_err);
newres.pu.dcl_mass = oldres.cr_dcl_pu_mass;
newres.pu.dcl_minus_asy_mass = new Tuple(oldres.cr_dcl_minus_asy_pu_mass, oldres.cr_dcl_minus_asy_pu_mass_err);
newres.pu.dcl_minus_asy_mass_pct = oldres.cr_dcl_minus_asy_pu_mass_pct;
newres.pu.dcl_minus_asy_pu_mass = new Tuple(oldres.cr_dcl_minus_asy_pu_mass, oldres.cr_dcl_minus_asy_pu_mass_err);
newres.pu.dcl_minus_asy_pu_mass_pct = oldres.cr_dcl_minus_asy_pu_mass_pct;
newres.pu.pass = TransferUtils.PassCheck(oldres.cr_pu_pass_fail);
newres.u.mass = new Tuple(oldres.cr_u_mass, oldres.cr_u_mass_err);
newres.u.dcl_mass = oldres.cr_dcl_u_mass_res;
newres.u.dcl_minus_asy_mass = new Tuple(oldres.cr_dcl_minus_asy_u_mass, oldres.cr_dcl_minus_asy_u_mass_err);
newres.u.dcl_minus_asy_mass_pct = oldres.cr_dcl_minus_asy_u_mass_pct;
newres.u.pass = TransferUtils.PassCheck(oldres.cr_u_pass_fail);
newres.u235.mass = new Tuple(oldres.cr_u235_mass, oldres.cr_u235_mass_err);
newres.u235.dcl_mass = oldres.cr_dcl_u235_mass_res;
newres.u235.dcl_minus_asy_mass = new Tuple(oldres.cr_dcl_minus_asy_u235_mass, oldres.cr_dcl_minus_asy_u235_mass_err);
newres.u235.dcl_minus_asy_mass_pct = oldres.cr_dcl_minus_asy_u235_mass_pct;
newres.cm_mass = new Tuple(oldres.cr_cm_mass, oldres.cr_cm_mass_err);
newres.methodParams2.cm_pu_ratio = new Tuple(oldres.cr_cm_pu_ratio, oldres.cr_cm_pu_ratio_err);
newres.cm_pu_ratio_decay_corr = new Tuple(oldres.cr_cm_pu_ratio_decay_corr, oldres.cr_cm_pu_ratio_decay_corr_err);
newres.methodParams2.cm_pu_ratio_date = INCC.DateFrom(TransferUtils.str(oldres.cr_cm_pu_ratio_date, INCC.DATE_TIME_LENGTH));
newres.cm_u_ratio_decay_corr = new Tuple(oldres.cr_cm_u_ratio_decay_corr, oldres.cr_cm_u_ratio_decay_corr_err);
newres.methodParams2.cm_u_ratio_date = INCC.DateFrom(TransferUtils.str(oldres.cr_cm_pu_ratio_date, INCC.DATE_TIME_LENGTH));
newres.methodParams2.pu_half_life = oldres.cr_pu_half_life;
newres.methodParams2.cm_id_label = TransferUtils.str(oldres.cr_cm_id_label, INCC.MAX_ITEM_ID_LENGTH);
newres.methodParams2.cm_id = TransferUtils.str(oldres.cr_cm_id, INCC.MAX_ITEM_ID_LENGTH);
newres.methodParams2.cm_input_batch_id = TransferUtils.str(oldres.cr_cm_input_batch_id, INCC.MAX_ITEM_ID_LENGTH);
newres.methodParams.cev.a = oldres.cr_a_res; newres.methodParams.cev.b = oldres.cr_b_res;
newres.methodParams.cev.c = oldres.cr_c_res; newres.methodParams.cev.d = oldres.cr_d_res;
newres.methodParams.cev.var_a = oldres.cr_var_a_res; newres.methodParams.cev.var_b = oldres.cr_var_b_res;
newres.methodParams.cev.var_c = oldres.cr_var_c_res; newres.methodParams.cev.var_d = oldres.cr_var_d_res;
newres.methodParams.cev.setcovar(Coeff.a,Coeff.b,oldres.cr_covar_ab_res);
newres.methodParams.cev._covar[0, 2] = oldres.cr_covar_ac_res;
newres.methodParams.cev._covar[0, 3] = oldres.cr_covar_ad_res;
newres.methodParams.cev._covar[1, 2] = oldres.cr_covar_bc_res;
newres.methodParams.cev._covar[1, 3] = oldres.cr_covar_bd_res;
newres.methodParams.cev._covar[2, 3] = oldres.cr_covar_cd_res;
newres.methodParams.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)oldres.cr_curium_ratio_equation;
newres.methodParams.cev.sigma_x = oldres.cr_sigma_x_res;
newres.methodParams.curium_ratio_type = OldToNewCRVariants(oldres.curium_ratio_type_res);
}
else if (r is results_active_passive_rec) // NEXT: confusion with combined, it's the same as Active internally? expand and study
{
mlogger.TraceEvent(LogLevels.Verbose, 34057, ("Transferring method results for " + r.GetType().ToString()));
results_active_passive_rec oldres = (results_active_passive_rec)r;
INCCMethodResults.results_active_passive_rec newres =
(INCCMethodResults.results_active_passive_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.ActivePassive, true);
newres.pass = TransferUtils.PassCheck(oldres.ap_pass_fail);
newres.k.v = oldres.ap_k; newres.k.err = oldres.ap_k_err;
newres.k0.v = oldres.ap_k0;
newres.k1.v = oldres.ap_k1; newres.k1.err = oldres.ap_k1_err;
newres.u235_mass.v = oldres.ap_u235_mass; newres.u235_mass.err = oldres.ap_u235_mass_err;
newres.dcl_minus_asy_u235_mass.v = oldres.ap_dcl_minus_asy_u235_mass; newres.dcl_minus_asy_u235_mass.err = oldres.ap_dcl_minus_asy_u235_mass_err;
newres.dcl_u235_mass = oldres.ap_dcl_u235_mass;
newres.dcl_minus_asy_u235_mass_pct = oldres.ap_dcl_minus_asy_u235_mass_pct;
newres.methodParams = new INCCAnalysisParams.active_passive_rec();
newres.methodParams.cev.a = oldres.ap_a_res; newres.methodParams.cev.b = oldres.ap_b_res;
newres.methodParams.cev.c = oldres.ap_c_res; newres.methodParams.cev.d = oldres.ap_d_res;
newres.methodParams.cev.var_a = oldres.ap_var_a_res; newres.methodParams.cev.var_b = oldres.ap_var_b_res;
newres.methodParams.cev.var_c = oldres.ap_var_c_res; newres.methodParams.cev.var_d = oldres.ap_var_d_res;
newres.methodParams.cev.setcovar(Coeff.a, Coeff.b, oldres.ap_covar_ab_res);
newres.methodParams.cev._covar[0, 2] = oldres.ap_covar_ac_res;
newres.methodParams.cev._covar[0, 3] = oldres.ap_covar_ad_res;
newres.methodParams.cev._covar[1, 2] = oldres.ap_covar_bc_res;
newres.methodParams.cev._covar[1, 3] = oldres.ap_covar_bd_res;
newres.methodParams.cev._covar[2, 3] = oldres.ap_covar_cd_res;
newres.methodParams.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)oldres.ap_active_passive_equation;
newres.methodParams.cev.sigma_x = oldres.ap_sigma_x_res;
newres.delta_doubles.v = oldres.ap_delta_doubles;
newres.delta_doubles.err = oldres.ap_delta_doubles_err;
}
else if (r is results_active_rec)
{
mlogger.TraceEvent(LogLevels.Verbose, 34058, ("Transferring method results for " + r.GetType().ToString()));
results_active_rec oldres = (results_active_rec)r;
INCCMethodResults.results_active_rec newres =
(INCCMethodResults.results_active_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.Active, true);
newres.pass = TransferUtils.PassCheck(oldres.act_pass_fail);
newres.k.v = oldres.act_k; newres.k.err = oldres.act_k_err;
newres.k0.v = oldres.act_k0;
newres.k1.v = oldres.act_k1; newres.k1.err = oldres.act_k1_err;
newres.u235_mass.v = oldres.act_u235_mass; newres.u235_mass.err = oldres.act_u235_mass_err;
newres.dcl_minus_asy_u235_mass.v = oldres.act_dcl_minus_asy_u235_mass; newres.dcl_minus_asy_u235_mass.err = oldres.act_dcl_minus_asy_u235_mass_err;
newres.dcl_u235_mass = oldres.act_dcl_u235_mass;
newres.dcl_minus_asy_u235_mass_pct = oldres.act_dcl_minus_asy_u235_mass_pct;
newres.methodParams = new INCCAnalysisParams.active_rec();
newres.methodParams.cev.a = oldres.act_a_res; newres.methodParams.cev.b = oldres.act_b_res;
newres.methodParams.cev.c = oldres.act_c_res; newres.methodParams.cev.d = oldres.act_d_res;
newres.methodParams.cev.var_a = oldres.act_var_a_res; newres.methodParams.cev.var_b = oldres.act_var_b_res;
newres.methodParams.cev.var_c = oldres.act_var_c_res; newres.methodParams.cev.var_d = oldres.act_var_d_res;
newres.methodParams.cev.setcovar(Coeff.a,Coeff.b,oldres.act_covar_ab_res);
newres.methodParams.cev._covar[0, 2] = oldres.act_covar_ac_res;
newres.methodParams.cev._covar[0, 3] = oldres.act_covar_ad_res;
newres.methodParams.cev._covar[1, 2] = oldres.act_covar_bc_res;
newres.methodParams.cev._covar[1, 3] = oldres.act_covar_bd_res;
newres.methodParams.cev._covar[2, 3] = oldres.act_covar_cd_res;
newres.methodParams.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)oldres.act_active_equation;
newres.methodParams.cev.sigma_x = oldres.act_sigma_x_res;
}
else if (r is results_active_mult_rec)
{
mlogger.TraceEvent(LogLevels.Verbose, 34059, ("Transferring method results for " + r.GetType().ToString()));
results_active_mult_rec oldres = (results_active_mult_rec)r;
INCCMethodResults.results_active_mult_rec newres =
(INCCMethodResults.results_active_mult_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.ActiveMultiplicity, true);
newres.methodParams = new INCCAnalysisParams.active_mult_rec();
newres.methodParams.vf1 = oldres.am_vf1_res;
newres.methodParams.vf2 = oldres.am_vf2_res;
newres.methodParams.vf3 = oldres.am_vf3_res;
newres.methodParams.vt1 = oldres.am_vt1_res;
newres.methodParams.vt2 = oldres.am_vt2_res;
newres.methodParams.vt3 = oldres.am_vt2_res;
newres.mult.v = oldres.am_mult;
newres.mult.err = oldres.am_mult_err;
}
else if (r is results_collar_rec)
{
mlogger.TraceEvent(LogLevels.Verbose, 34060, ("Transferring method results for " + r.GetType().ToString()));
results_collar_rec oldres = (results_collar_rec)r;
INCCMethodResults.results_collar_rec newres =
(INCCMethodResults.results_collar_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.Collar, true);
newres.u235_mass.v = oldres.col_u235_mass; newres.u235_mass.err = oldres.col_u235_mass_err;
newres.percent_u235 = oldres.col_percent_u235;
newres.total_u_mass = oldres.col_total_u_mass;
newres.k0.v = oldres.col_k0; newres.k0.err = oldres.col_k0_err;
newres.k1.v = oldres.col_k1; newres.k1.err = oldres.col_k1_err;
newres.k2.v = oldres.col_k2; newres.k2.err = oldres.col_k2_err;
newres.k3.v = oldres.col_k3; newres.k3.err = oldres.col_k3_err;
newres.k4.v = oldres.col_k4; newres.k4.err = oldres.col_k4_err;
newres.k5.v = oldres.col_k5; newres.k5.err = oldres.col_k5_err;
newres.source_id = TransferUtils.str(oldres.col_source_id, INCC.SOURCE_ID_LENGTH);
newres.total_corr_fact.v = oldres.col_total_corr_fact; newres.total_corr_fact.err = oldres.col_total_corr_fact_err;
newres.corr_doubles.v = oldres.col_corr_doubles; newres.corr_doubles.err = oldres.col_corr_doubles_err;
newres.dcl_length.v = oldres.col_dcl_length; newres.dcl_length.err = oldres.col_dcl_length_err;
newres.dcl_total_u235.v = oldres.col_dcl_total_u235; newres.dcl_total_u235.err = oldres.col_dcl_total_u235_err;
newres.dcl_total_u238.v = oldres.col_dcl_total_u238; newres.dcl_total_u238.err = oldres.col_dcl_total_u238_err;
newres.dcl_total_rods = oldres.col_dcl_total_rods;
newres.dcl_total_poison_rods = oldres.col_dcl_total_poison_rods;
newres.dcl_poison_percent.v = oldres.col_dcl_poison_percent;
newres.dcl_poison_percent.err = oldres.col_dcl_poison_percent_err;
newres.dcl_minus_asy_u235_mass_pct = oldres.col_dcl_minus_asy_u235_mass_pct;
newres.dcl_minus_asy_u235_mass.v = oldres.col_dcl_minus_asy_u235_mass;
newres.dcl_minus_asy_u235_mass.err = oldres.col_dcl_minus_asy_u235_mass_err;
newres.methodParamsC.cev.a = oldres.col_a_res; newres.methodParamsC.cev.b = oldres.col_b_res;
newres.methodParamsC.cev.c = oldres.col_c_res; newres.methodParamsC.cev.d = oldres.col_d_res;
newres.methodParamsC.cev.var_a = oldres.col_var_a_res; newres.methodParamsC.cev.var_b = oldres.col_var_b_res;
newres.methodParamsC.cev.var_c = oldres.col_var_c_res; newres.methodParamsC.cev.var_d = oldres.col_var_d_res;
newres.methodParamsC.cev.setcovar(Coeff.a,Coeff.b,oldres.col_covar_ab_res);
newres.methodParamsC.cev._covar[0, 2] = oldres.col_covar_ac_res;
newres.methodParamsC.cev._covar[0, 3] = oldres.col_covar_ad_res;
newres.methodParamsC.cev._covar[1, 2] = oldres.col_covar_bc_res;
newres.methodParamsC.cev._covar[1, 3] = oldres.col_covar_bd_res;
newres.methodParamsC.cev._covar[2, 3] = oldres.col_covar_cd_res;
newres.methodParamsC.cev.cal_curve_equation = (INCCAnalysisParams.CurveEquation)oldres.col_collar_equation;
newres.methodParamsC.cev.sigma_x = oldres.col_sigma_x_res;
newres.methodParamsC.poison_absorption_fact[0] = oldres.col_poison_absorption_fact_res;
newres.methodParamsC.poison_rod_a[0] = new Tuple(oldres.col_poison_rod_a_res, oldres.col_poison_rod_a_err_res);
newres.methodParamsC.poison_rod_b[0] = new Tuple(oldres.col_poison_rod_b_res, oldres.col_poison_rod_b_err_res);
newres.methodParamsC.poison_rod_c[0] = new Tuple(oldres.col_poison_rod_c_res, oldres.col_poison_rod_c_err_res);
newres.methodParamsC.collar_mode = (oldres.col_collar_mode == 0 ? false : true);
newres.methodParamsC.number_calib_rods = (int)oldres.col_number_calib_rods_res;
newres.methodParamsC.poison_rod_type[0] = TransferUtils.str(oldres.col_poison_rod_type_res, INCC.MAX_ROD_TYPE_LENGTH);
newres.methodParamsC.u_mass_corr_fact_a.v = oldres.col_u_mass_corr_fact_a_res; newres.methodParamsC.u_mass_corr_fact_a.err = oldres.col_u_mass_corr_fact_a_err_res;
newres.methodParamsC.u_mass_corr_fact_b.v = oldres.col_u_mass_corr_fact_b_res; newres.methodParamsC.u_mass_corr_fact_b.err = oldres.col_u_mass_corr_fact_b_err_res;
newres.methodParamsC.sample_corr_fact.v = oldres.col_sample_corr_fact_res; newres.methodParamsC.sample_corr_fact.err = oldres.col_sample_corr_fact_err_res;
newres.methodParamsDetector.collar_mode = (oldres.col_collar_mode == 0 ? false : true);
newres.methodParamsDetector.reference_date = INCC.DateFrom(TransferUtils.str(oldres.col_reference_date_res, INCC.DATE_TIME_LENGTH));
newres.methodParamsDetector.relative_doubles_rate = oldres.col_relative_doubles_rate_res;
newres.methodParamsK5.k5_mode = (oldres.col_collar_mode == 0 ? false : true);
newres.methodParamsK5.k5_item_type = TransferUtils.str(oldres.col_collar_item_type, INCC.MAX_ITEM_TYPE_LENGTH);
newres.methodParamsK5.k5 = Copy(oldres.collar_k5_res, oldres.collar_k5_err_res, INCC.MAX_COLLAR_K5_PARAMETERS);
newres.methodParamsK5.k5_checkbox = TransferUtils.Copy(oldres.collar_k5_checkbox_res, INCC.MAX_COLLAR_K5_PARAMETERS);
for (int i = 0; i < INCC.MAX_COLLAR_K5_PARAMETERS; i++)
{
int index = i * INCC.MAX_K5_LABEL_LENGTH;
newres.methodParamsK5.k5_label[i] = TransferUtils.str(oldres.collar_k5_label_res + index, INCC.MAX_K5_LABEL_LENGTH);
}
CollarItemId cid = new CollarItemId(TransferUtils.str(results.item_id, INCC.MAX_ITEM_ID_LENGTH));
cid.length = new Tuple(newres.dcl_length);
cid.total_u235 = new Tuple(newres.dcl_total_u235);
cid.total_u238 = new Tuple(newres.dcl_total_u238);
cid.total_rods = newres.dcl_total_rods;
cid.total_poison_rods = newres.dcl_total_poison_rods;
cid.poison_percent = new Tuple(newres.dcl_poison_percent);
cid.rod_type = newres.methodParamsC.poison_rod_type[0];
cid.modified = true;
List<CollarItemId> list = NC.App.DB.CollarItemIds.GetList();
bool glump = list.Exists(i => { return string.Compare(cid.item_id, i.item_id, true) == 0; });
if (glump && overwrite)
{
list.Remove(cid);
list.Add(cid);
}
else list.Add(cid);
}
else if (r is results_de_mult_rec)
{
mlogger.TraceEvent(LogLevels.Verbose, 34061, ("Transferring method results for " + r.GetType().ToString()));
results_de_mult_rec oldres = (results_de_mult_rec)r;
INCCMethodResults.results_de_mult_rec newres =
(INCCMethodResults.results_de_mult_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.DUAL_ENERGY_MULT_SAVE_RESTORE, true);
newres.meas_ring_ratio = oldres.de_meas_ring_ratio;
newres.energy_corr_factor = oldres.de_energy_corr_factor;
newres.interpolated_neutron_energy = oldres.de_interpolated_neutron_energy;
newres.methodParams.detector_efficiency = TransferUtils.Copy(oldres.de_detector_efficiency_res, INCC.MAX_DUAL_ENERGY_ROWS);
newres.methodParams.inner_outer_ring_ratio = TransferUtils.Copy(oldres.de_inner_outer_ring_ratio_res, INCC.MAX_DUAL_ENERGY_ROWS);
newres.methodParams.neutron_energy = TransferUtils.Copy(oldres.de_neutron_energy_res, INCC.MAX_DUAL_ENERGY_ROWS);
newres.methodParams.relative_fission = TransferUtils.Copy(oldres.de_relative_fission_res, INCC.MAX_DUAL_ENERGY_ROWS);
newres.methodParams.inner_ring_efficiency = oldres.de_inner_ring_efficiency_res;
newres.methodParams.outer_ring_efficiency = oldres.de_outer_ring_efficiency_res;
}
else if (r is results_tm_bkg_rec)
{
mlogger.TraceEvent(LogLevels.Warning, 34062, ("Transferring method results for " + r.GetType().ToString()));
results_tm_bkg_rec oldres = (results_tm_bkg_rec)r; // todo: tm bkg handling design incomplete, these values are attached to bkg measurements when the truncated flag is enabled
INCCMethodResults.results_tm_bkg_rec newres =
(INCCMethodResults.results_tm_bkg_rec)meas.INCCAnalysisResults.LookupMethodResults(det.MultiplicityParams, meas.INCCAnalysisState.Methods.selector, AnalysisMethod.None, true);
newres.methodParams.Singles.v = oldres.results_tm_singles_bkg;
newres.methodParams.Singles.err = oldres.results_tm_singles_bkg_err;
newres.methodParams.Zeros.v = oldres.results_tm_zeros_bkg;
newres.methodParams.Zeros.err = oldres.results_tm_zeros_bkg_err;
newres.methodParams.Ones.v = oldres.results_tm_ones_bkg;
newres.methodParams.Ones.err = oldres.results_tm_ones_bkg_err;
newres.methodParams.Twos.v = oldres.results_tm_twos_bkg;
newres.methodParams.Twos.err = oldres.results_tm_twos_bkg_err;
}
else
{
mlogger.TraceEvent(LogLevels.Warning, 34040, ("todo: Transferring method results for " + r.GetType().ToString())); // todo: complete the list
}
}
}
#endregion results transfer
// dev note: here is where the detector tree creation and replacement with restore_replace_detector_structs occurs in the original code
// todo: based on overwrite flag, replace det-dependent classes, the analysis_methods: (none-map) and each (det,mat) -> calib from results class instances
#region Meas&Results
AnalysisDefs.holdup_config_rec hc = new AnalysisDefs.holdup_config_rec();
hc.glovebox_id = TransferUtils.str(results.results_glovebox_id, INCC.MAX_GLOVEBOX_ID_LENGTH);
hc.num_columns = results.results_num_columns;
hc.num_rows = results.results_num_rows;
hc.distance = results.results_distance;
meas.AcquireState.glovebox_id = hc.glovebox_id;
// this is a good place to create the general results_rec
INCCResults.results_rec xres = new INCCResults.results_rec(meas);
meas.INCCAnalysisResults.TradResultsRec = xres;
// oddball entries in need of preservation
xres.total_good_count_time = results.total_good_count_time;
xres.total_number_runs = results.total_number_runs;
xres.primary = imr.primaryMethod;
xres.net_drum_weight = results.net_drum_weight;
xres.completed = (results.completed != 0 ? true : false);
xres.db_version = results.db_version;
xres.hc = hc;
xres.original_meas_date = INCC.DateFrom(TransferUtils.str(results.original_meas_date, INCC.DATE_TIME_LENGTH));
// NEXT: copy move passive and active meas id's here
long mid = meas.Persist();
// save the warning and error messages from the results here, these rode on the results rec in INCC5
NC.App.DB.AddAnalysisMessages(msgs, mid);
// Store off Params
NC.App.DB.UpdateDetector(det);
NC.App.DB.NormParameters.Set(det, meas.Norm); // might have been saved in earlier step already
NC.App.DB.BackgroundParameters.Set(det, meas.Background);
INCCDB.AcquireSelector acqsel = new INCCDB.AcquireSelector(det, acq.item_type, acq.MeasDateTime);
if (overwrite)
{
NC.App.DB.ReplaceAcquireParams(acqsel, acq);
}
else
NC.App.DB.AddAcquireParams(acqsel, acq); // gotta add it to the global map, then push it to the DB
if (meas.Tests != null) // added only if not found on the list
NC.App.DB.TestParameters.Set(meas.Tests);
NC.App.DB.Isotopics.SetList(); // new style de 'mouser'!
//NC.App.DB.CompositeIsotopics.SetList();// next:NYI
NC.App.DB.ItemIds.SetList(); // This writes any new items ids to the DB
NC.App.DB.CollarItemIds.SetList(); // so does this
//Loop over measurement cycles
NC.App.DB.AddCycles(meas.Cycles, det.MultiplicityParams, mid);
//Store off Params
// todo: complete table design and creation/update here, still have issues with collar and curium ratio results
// get results based on meas option, (Calib and Verif have method results, others do not), update into DB here
IEnumerator iter = meas.INCCAnalysisResults.GetMeasSelectorResultsEnumerator();
while (iter.MoveNext()) // only one result indexer is present when doing an INCC5 transfer
{
MeasOptionSelector moskey = (MeasOptionSelector)iter.Current;
INCCResult ir = meas.INCCAnalysisResults[moskey];
// ir contains the measurement option-specific results: empty for rates and holdup, and also empty for calib and verif, the method-focused analyses,
// but values are present for initial, normalization, precision, and should be present for background for the tm bkg results
switch (meas.MeasOption)
{
case AssaySelector.MeasurementOption.background:
if (meas.Background.TMBkgParams.ComputeTMBkg)
mlogger.TraceEvent(LogLevels.Warning, 82010, "Background truncated multiplicity"); // todo: present the tm bkg results on m.Background
break;
case AssaySelector.MeasurementOption.initial:
case AssaySelector.MeasurementOption.normalization:
case AssaySelector.MeasurementOption.precision:
{
ElementList els = ir.ToDBElementList();
ParamsRelatedBackToMeasurement ar = new ParamsRelatedBackToMeasurement(ir.Table);
long resid = ar.Create(mid, els);
mlogger.TraceEvent(LogLevels.Verbose, 34103, string.Format("Preserving {0} as {1}", ir.Table, resid));
}
break;
case AssaySelector.MeasurementOption.verification:
case AssaySelector.MeasurementOption.calibration:
{
INCCMethodResults imrs;
bool have = meas.INCCAnalysisResults.TryGetINCCResults(moskey.MultiplicityParams, out imrs);
if (have) // should be true for verification and calibration
{
if (imrs.ContainsKey(meas.INCCAnalysisState.Methods.selector))
{
// we've got a distinct detector id and material type on the methods, so that is the indexer here
Dictionary<AnalysisMethod, INCCMethodResult> amimr = imrs[meas.INCCAnalysisState.Methods.selector];
// now get an enumerator over the map of method results
Dictionary<AnalysisMethod, INCCMethodResult>.Enumerator ai = amimr.GetEnumerator();
while (ai.MoveNext())
{
if (ai.Current.Key.IsNone())
continue;
INCCMethodResult _imr = ai.Current.Value;
// insert this into the DB under the current meas key
try
{
ElementList els = _imr.ToDBElementList(); // also sets table property, gotta do it first
ParamsRelatedBackToMeasurement ar = new ParamsRelatedBackToMeasurement(_imr.Table);
long resid = ar.Create(mid, els);
do
{
long resmid = ar.CreateMethod(resid, mid, _imr.methodParams.ToDBElementList());
mlogger.TraceEvent(LogLevels.Verbose, 34101, string.Format("Preserving {0} as {1},{2}", _imr.Table, resmid, resid));
} while (_imr.methodParams.Pump > 0);
}
catch (Exception e)
{
mlogger.TraceEvent(LogLevels.Warning, 34102, "Results processing error {0} {1}", _imr.ToString(), e.Message);
}
}
} else
mlogger.TraceEvent(LogLevels.Error, 34102, "Results missing for {0}", meas.INCCAnalysisState.Methods.selector.ToString());
}
}
break;
case AssaySelector.MeasurementOption.rates:
case AssaySelector.MeasurementOption.holdup:
case AssaySelector.MeasurementOption.unspecified:
default: // nothing new to present with these
break;
}
}
#endregion Meas&Results
// todo: handle well config setting with bkg here;
return true;
}
/// <summary>
/// Finalize measurement instance content for analysis
/// Populate calibration parameters maps
/// </summary>
/// <param name="meas">The partially initialized measurement instance</param>
/// <param name="useCurCalibParams">Default behavior is to use active method and other calibration parameters;
/// skipped if Reanalysis prepared the details from database measurement results
/// </param>
static public void FillInReanalysisRemainingDetails(Measurement meas, bool useCurCalibParams = true)
{
// get the current INCC5 analysis methods
if (useCurCalibParams || meas.INCCAnalysisState == null)
{
meas.INCCAnalysisState = new INCCAnalysisState();
INCCSelector sel = new INCCSelector(meas.AcquireState.detector_id, meas.AcquireState.item_type);
AnalysisMethods am;
bool found = CentralizedState.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out am);
if (found)
{
am.selector = sel; // gotta do this so that the equality operator is not incorrect
meas.INCCAnalysisState.Methods = am;
}
else
{
meas.INCCAnalysisState.Methods = new AnalysisMethods(sel);
}
} // else use what was there
meas.InitializeContext(clearCounterResults: false);
meas.PrepareINCCResults();
System.Collections.IEnumerator iter = meas.CountingAnalysisResults.GetATypedParameterEnumerator(typeof(Multiplicity));
while (iter.MoveNext())
{
Multiplicity mkey = (Multiplicity)iter.Current;
try
{
MultiplicityCountingRes mcr = (MultiplicityCountingRes)meas.CountingAnalysisResults[mkey];
if (mcr.AB.Unset)
{
LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(mkey, mcr); // works only if MaxBins is set
}
MeasOptionSelector mos = new MeasOptionSelector(meas.MeasOption, mkey);
INCCResult result = meas.INCCAnalysisState.Lookup(mos);
result.CopyFrom(mcr);
}
catch (Exception)
{
//logger.TraceEvent(LogLevels.Error, 4027, "PrepareINCCResults error: " + ex.Message);
}
}
// stratum look up, finds existing stratum by name
if (useCurCalibParams || meas.Stratum == null)
{
List <INCCDB.StratumDescriptor> sl = CentralizedState.App.DB.StrataList();
INCCDB.StratumDescriptor s = sl.Find(w => string.Compare(w.Desc.Name, meas.AcquireState.stratum_id.Name, true) == 0);
if (s == null)
{
meas.Stratum = new Stratum();
}
else
{
meas.Stratum = new Stratum(s.Stratum);
}
}
INCCResults.results_rec xres = new INCCResults.results_rec(meas);
meas.INCCAnalysisResults.TradResultsRec = xres;
CentralizedState.App.Opstate.Measurement = meas; // put the measurement definition on the global state
}
/// <summary>
/// Prepare measurement instance content for analysis
/// Populate calibration and counting parameters maps
/// Create general results and specific results dictionary map entries
/// Set up stratum details
/// </summary>
/// <param name="meas">The partially initialized measurement instance</param>
/// <param name="useCurCalibParams">Default behavior is to use active method and other calibration parameters;
/// skipped if Reanalysis prepared the details from database measurement results
/// </param>
public static void FillInMeasurementDetails(Measurement meas, bool useCurCalibParams = true)
{
if (meas.Detector.ListMode)
{
// APluralityOfMultiplicityAnalyzers: see below
// URGENT: see below
//if (an INCC5 DB cycle read or DB Ver reanalysis then rebuild the analyzers from the associated saved LM results:)
// object x = CentralizedState.App.DB.GetAnalyzersFromResults(meas.Detector, meas.MeasurementId);
//else
meas.AnalysisParams = CentralizedState.App.LMBD.CountingParameters(meas.Detector, applySRFromDetector: true);
if (meas.MeasOption.IsListMode()) // pure List Mode, not INCC5
{
// for a list-mode-only measurement with a multiplicity analyzer the detector SR params must match at least one of the multiplicity analyzer SR params
ApplyVSRChangesToDefaultDetector(meas);
}
else // it is an INCC5 analysis driven with LM data
{
// prepare or identify an active CA entry with matching CA gatewidth and FA, and has the same SR params as the detector
if (meas.AnalysisParams.PrepareMatchingVSR(meas.Detector.MultiplicityParams))
CentralizedState.App.LMBD.UpdateCounters(meas.Detector.Id.DetectorName, meas.AnalysisParams); // added one, save it
}
}
else // construct param key source with the single mkey entry point
{
// prepare analyzer params from detector SR params
meas.AnalysisParams = CentralizedState.App.LMBD.CountingParameters(meas.Detector, applySRFromDetector: false);
if (!meas.AnalysisParams.Exists(w => { return (w is Multiplicity) && (w as Multiplicity).Equals(meas.Detector.MultiplicityParams); }))
meas.AnalysisParams.Add(meas.Detector.MultiplicityParams);
}
// get the current INCC5 analysis methods
if (useCurCalibParams || meas.INCCAnalysisState == null)
{
meas.INCCAnalysisState = new INCCAnalysisState();
INCCSelector sel = new INCCSelector(meas.AcquireState.detector_id, meas.AcquireState.item_type);
AnalysisMethods am;
bool found = CentralizedState.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out am);
if (found)
{
am.selector = sel; // gotta do this so that the equality operator is not incorrect
meas.INCCAnalysisState.Methods = am;
}
else
meas.INCCAnalysisState.Methods = new AnalysisMethods(sel);
} // else use what was there
meas.InitializeContext(clearCounterResults:true);
meas.PrepareINCCResults();
// stratum look up, finds existing stratum by name
if (useCurCalibParams || meas.Stratum == null)
{
List<INCCDB.StratumDescriptor> sl = CentralizedState.App.DB.StrataList();
INCCDB.StratumDescriptor s = sl.Find(w => string.Compare(w.Desc.Name, meas.AcquireState.stratum_id.Name, true) == 0);
if (s == null)
meas.Stratum = new Stratum();
else
meas.Stratum = new Stratum(s.Stratum);
}
INCCResults.results_rec xres = new INCCResults.results_rec(meas);
meas.INCCAnalysisResults.TradResultsRec = xres;
CentralizedState.App.Opstate.Measurement = meas; // put the measurement definition on the global state
}
INCCAnalysisParams.collar_combined_rec CollarEntryProcesser(INCCInitialDataCalibrationFile idcf, INCCSelector sel, byte mode)
{
DetectorMaterialMethod m1 = new DetectorMaterialMethod(sel.material, sel.detectorid, INCC.COLLAR_DETECTOR_SAVE_RESTORE); m1.extra = mode;
DetectorMaterialMethod m2 = new DetectorMaterialMethod(sel.material, sel.detectorid, INCC.COLLAR_SAVE_RESTORE); m2.extra = mode;
DetectorMaterialMethod m3 = new DetectorMaterialMethod(sel.material, sel.detectorid, INCC.COLLAR_K5_SAVE_RESTORE); m3.extra = mode;
KeyValuePair<DetectorMaterialMethod, object> k1, k2, k3;
bool ok = idcf.DetectorMaterialMethodParameters.GetPair(m1, out k1);
if (!ok)
{
mlogger.TraceEvent(LogLevels.Verbose, 30811, "No collar detector values for " + m1.ToString());
ok = idcf.DetectorMaterialMethodParameters.GetPair(m2, out k2);
if (ok)
{
// k5 and collar but no det entry, find the closest match det entry and make a fake one and use it
List<KeyValuePair<DetectorMaterialMethod, object>> l = idcf.DetectorMaterialMethodParameters.GetDetectorsWithEntries;
if (l.Count > 0)
{
object o = l[0].Value;
collar_detector_rec rec = MakeAFake((collar_detector_rec)o, sel.detectorid, sel.material);
DetectorMaterialMethod mf1 = new DetectorMaterialMethod(sel.material, sel.detectorid, INCC.COLLAR_DETECTOR_SAVE_RESTORE); mf1.extra = mode;
k1 = new KeyValuePair<DetectorMaterialMethod, object>(mf1, rec);
}
else
return null;
}
else
{
mlogger.TraceEvent(LogLevels.Verbose, 30812, "No collar values for " + m2.ToString());
return null;
}
}
else
{
ok = idcf.DetectorMaterialMethodParameters.GetPair(m2, out k2);
if (!ok)
{
mlogger.TraceEvent(LogLevels.Verbose, 30812, "No collar values for " + m2.ToString());
return null;
}
}
ok = idcf.DetectorMaterialMethodParameters.GetPair(m3, out k3);
if (!ok)
{
mlogger.TraceEvent(LogLevels.Verbose, 30813, "No k5 values for " + m3.ToString());
return null;
}
collar_rec collar;
collar_detector_rec collar_detector;
collar_k5_rec collar_k5;
if (k1.Key.extra == -1)
return null;
collar_detector = (collar_detector_rec)k1.Value;
if (k2.Key.extra == -1)
return null;
collar = (collar_rec)k2.Value;
if (k3.Key.extra == -1)
return null;
collar_k5 = (collar_k5_rec)k3.Value;
// got the three
INCCAnalysisParams.collar_combined_rec combined = new INCCAnalysisParams.collar_combined_rec();
ushort bonk = 0;
CollarDet(combined, collar_detector, bonk);
bonk = 1;
CollarParm(combined, collar, bonk);
bonk = 2;
CollarK5(combined, collar_k5, bonk);
bonk = 3;
k1.Key.extra = -1;
k2.Key.extra = -1;
k3.Key.extra = -1;
return combined;
}
public static AnalysisMethods GetMethodSelections(string det, string mat)
{
INCCSelector sel = new INCCSelector(det, mat);
AnalysisMethods lam;
bool found = CentralizedState.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out lam);
return lam;
}
internal static unsafe active_mult_rec MoveAM(INCCSelector se, INCCAnalysisParams.INCCMethodDescriptor md)
{
INCCAnalysisParams.active_mult_rec imr = (INCCAnalysisParams.active_mult_rec)md;
active_mult_rec m = new active_mult_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.active_mult_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, m.active_mult_item_type);
m.am_vf1 = imr.vf1;
m.am_vf2 = imr.vf2;
m.am_vf3 = imr.vf3;
m.am_vt1 = imr.vt1;
m.am_vt2 = imr.vt2;
m.am_vt3 = imr.vt3;
return m;
}
internal static unsafe analysis_method_rec MoveAMR(INCCSelector se)
{
analysis_method_rec amr = new analysis_method_rec();
byte[] b = new byte[INCC.MAX_DETECTOR_ID_LENGTH];
char[] a = se.detectorid.ToCharArray(0, Math.Min(se.detectorid.Length, INCC.MAX_DETECTOR_ID_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, amr.analysis_method_detector_id);
b = new byte[INCC.MAX_ITEM_TYPE_LENGTH];
a = se.material.ToCharArray(0, Math.Min(se.material.Length, INCC.MAX_ITEM_TYPE_LENGTH));
Encoding.ASCII.GetBytes(a, 0, a.Length, b, 0);
TransferUtils.Copy(b, amr.item_type);
AnalysisMethods ams = NC.App.DB.DetectorMaterialAnalysisMethods[se];
amr.backup_method = (byte)NewTypeToOldMethodId(ams.Backup);
amr.normal_method = (byte)NewTypeToOldMethodId(ams.Normal);
amr.cal_curve = (byte)(ams.choices[(int)AnalysisMethod.CalibrationCurve] ? 1 : 0);
amr.active = (byte)(ams.choices[(int)AnalysisMethod.Active] ? 1 : 0);
amr.active_mult = (byte)(ams.choices[(int)AnalysisMethod.ActiveMultiplicity] ? 1 : 0);
amr.active_passive = (byte)(ams.choices[(int)AnalysisMethod.ActivePassive] ? 1 : 0);
amr.add_a_source = (byte)(ams.choices[(int)AnalysisMethod.AddASource] ? 1 : 0);
amr.collar = (byte)(ams.choices[(int)AnalysisMethod.Collar] ? 1 : 0);
amr.curium_ratio = (byte)(ams.choices[(int)AnalysisMethod.CuriumRatio] ? 1 : 0);
amr.known_alpha = (byte)(ams.choices[(int)AnalysisMethod.KnownA] ? 1 : 0);
amr.known_m = (byte)(ams.choices[(int)AnalysisMethod.KnownM] ? 1 : 0);
amr.multiplicity = (byte)(ams.choices[(int)AnalysisMethod.Multiplicity] ? 1 : 0);
amr.truncated_mult = (byte)(ams.choices[(int)AnalysisMethod.TruncatedMultiplicity] ? 1 : 0);
return amr;
}
/// <summary>
/// Construct a full measurement state and set it on the internal lameness
/// </summary>
/// <param name="acq">Acquire Parameters</param>
/// <param name="det">Detector</param>
/// <param name="mo">MeasurementOption</param>
public static void BuildMeasurement(AcquireParameters acq, Detector det, AssaySelector.MeasurementOption mo)
{
// gather it all together
MeasurementTuple mt = new MeasurementTuple(new DetectorList(det),
CentralizedState.App.DB.TestParameters.Get(),
GetCurrentNormParams(det),
GetCurrentBackgroundParams(det),
GetAcquireIsotopics(acq),
acq,
GetCurrentHVCalibrationParams(det));
det.Id.source = acq.data_src; // set the detector overall data source value here
// create the context holder for the measurement. Everything is rooted here ...
Measurement meas = new Measurement(mt, mo, CentralizedState.App.Logger(LMLoggers.AppSection.Data));
if (det.ListMode)
{
// dev note: design flaw exposed by this mess here, when LM has > 1 SVR, there is no way to associate > 1 SVRs with a single detector/SR/Mult/Conn pairing
// It should be the other way around, the Mult params for each LMMultiplicity analyzer override the single entry on the sr_parms_rec when each analyis is performed.
meas.AnalysisParams = CentralizedState.App.LMBD.CountingParameters(det, applySRFromDetector:true);
if (mo == AssaySelector.MeasurementOption.unspecified) // pure List Mode, not INCC5
{
// for a list-mode-only measurement with a multiplicity analyzer the detector SR params must match at least one of the multiplicity analyzer SR params
ApplyVSRChangesToDefaultDetector(meas);
}
else // it is an INCC5 analysis driven with LM data
{
// check to see if detector settings are copied into an active CA entry
if (!meas.AnalysisParams.Exists(w => { return (w is Multiplicity) && (w as Multiplicity).Equals(det.MultiplicityParams) && w.Active; }))
meas.AnalysisParams.Add(det.MultiplicityParams);
}
}
else
{
// prepare analyzer params from detector SR params
meas.AnalysisParams = CentralizedState.App.LMBD.CountingParameters(det, applySRFromDetector:false);
if (!meas.AnalysisParams.Exists(w => { return (w is Multiplicity) && (w as Multiplicity).Equals(det.MultiplicityParams); }))
meas.AnalysisParams.Add(det.MultiplicityParams);
}
// get the INCC5 analysis methods
meas.INCCAnalysisState = new INCCAnalysisState();
INCCSelector sel = new INCCSelector(acq.detector_id, acq.item_type);
AnalysisMethods am;
bool found = CentralizedState.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out am);
if (found)
{
am.selector = sel; // gotta do this so that the equality operator is not incorrect
meas.INCCAnalysisState.Methods = am;
}
else
meas.INCCAnalysisState.Methods = new AnalysisMethods(sel);
meas.InitializeContext();
meas.PrepareINCCResults();
// next: stratum not set
List<INCCDB.StratumDescriptor> sl = CentralizedState.App.DB.StrataList();
INCCDB.StratumDescriptor s = sl.Find(w => w.Desc.CompareTo(acq.stratum_id) == 0);
if (s == null)
meas.Stratum = new Stratum();
else
meas.Stratum = new Stratum(s.Stratum);
INCCResults.results_rec xres = new INCCResults.results_rec(meas);
meas.INCCAnalysisResults.TradResultsRec = xres;
CentralizedState.App.Opstate.Measurement = meas; // put the measurement definition on the global state
// ready for insertion of methods and processing start
}