/// <summary>
/// Anonymises every DICOM file in the specified folder path and saves locally to the
/// correct dry run folder.
/// </summary>
/// <param name="anonymisationProtocolId">The anonymisation protocol unique identifier.</param>
/// <param name="anonymisationProtocol">The anonymisation protocol.</param>
/// <param name="uploadQueueItem">The upload queue item.</param>
/// <param name="aETConfigType">Type of application entity title configuration.</param>
/// <returns>The async task.</returns>
private async Task AnonymiseAndSaveDicomFilesAsync(
Guid anonymisationProtocolId,
IEnumerable <DicomTagAnonymisation> anonymisationProtocol,
UploadQueueItem uploadQueueItem,
AETConfigType aETConfigType)
{
var dryRunFolder = DryRunFolders.GetFolder(aETConfigType);
var resultFolderPath = Path.Combine(uploadQueueItem.RootDicomFolderPath, dryRunFolder, uploadQueueItem.AssociationGuid.ToString());
foreach (var filePath in EnumerateFiles(uploadQueueItem.AssociationFolderPath, uploadQueueItem))
{
var dicomFile = TryOpenDicomFile(filePath, uploadQueueItem);
// Not a DICOM file or is not a structure set file.
if (dicomFile == null)
{
EnqueueMessage(new DeleteQueueItem(uploadQueueItem, filePath), _deleteQueuePath);
continue;
}
var anonymizedDicomFile = _innerEyeSegmentationClient.AnonymizeDicomFile(
dicomFile: dicomFile,
anonymisationProtocolId: anonymisationProtocolId,
anonymisationProtocol: anonymisationProtocol);
await SaveDicomFilesAsync(resultFolderPath, anonymizedDicomFile).ConfigureAwait(false);
// This item has been saved, we can now delete this file
EnqueueMessage(new DeleteQueueItem(uploadQueueItem, filePath), _deleteQueuePath);
}
}
public DicomFile AnonymizeDicomFile(DicomFile dicomFile, Guid anonymisationProtocolId, IEnumerable <DicomTagAnonymisation> anonymisationProtocol)
{
return(_InnerEyeSegmentationClient.AnonymizeDicomFile(dicomFile, anonymisationProtocolId, anonymisationProtocol));
}
