public void RetrieveDefaultValueFor(IndividualSettingsDTO individualSettingsDTO)
{
individualSettingsDTO.SubPopulation = _subPopulationDTOMapper.MapFrom(_originDataTask.DefaultSubPopulationFor(individualSettingsDTO.Species));
//Default parameter such as age etc.. were not defined yet
var originData = _originDataMapper.MapFrom(individualSettingsDTO);
var parameterAge = _parameterMapper.MapAsReadWriteFrom(_individualModelTask.MeanAgeFor(originData));
originData.Age = parameterAge.KernelValue;
var parameterGestationalAge = _parameterMapper.MapAsReadWriteFrom(_individualModelTask.MeanGestationalAgeFor(originData));
originData.GestationalAge = parameterGestationalAge.KernelValue;
setDefaultValues(individualSettingsDTO, originData, parameterAge, parameterGestationalAge);
}
public void UpdateDefaultValueFor(IndividualSettingsDTO individualSettingsDTO)
{
individualSettingsDTO.SubPopulation = _subPopulationDTOMapper.MapFrom(_originDataTask.DefaultSubPopulationFor(individualSettingsDTO.Species));
//Default parameter such as age etc.. were not defined yet
var originData = _originDataMapper.MapFrom(individualSettingsDTO);
var parameterAge = _individualModelTask.MeanAgeFor(originData);
if (parameterAge != null)
{
originData.Age = new OriginDataParameter(parameterAge.Value);
}
var parameterGestationalAge = _individualModelTask.MeanGestationalAgeFor(originData);
if (parameterGestationalAge != null)
{
originData.GestationalAge = new OriginDataParameter(parameterGestationalAge.Value);
}
setDefaultValues(individualSettingsDTO, originData, _parameterMapper.MapAsReadWriteFrom(parameterAge), _parameterMapper.MapAsReadWriteFrom(parameterGestationalAge));
}
public Individual DefaultIndividualFor(SpeciesPopulation speciesPopulation)
{
if (!_indvidualCacheProSpecies.Contains(speciesPopulation))
{
var species = _speciesRepository.FindByName(speciesPopulation.Species);
var individualDTO = _individualDefaultValueRetriever.DefaultSettingForSpecies(species);
individualDTO.SpeciesPopulation = speciesPopulation;
_individualDefaultValueRetriever.RetrieveDefaultValueFor(individualDTO);
_indvidualCacheProSpecies[speciesPopulation] = _individualFactory.CreateStandardFor(_individualSettingsMapper.MapFrom(individualDTO));
}
return(_indvidualCacheProSpecies[speciesPopulation]);
}
public Individual DefaultIndividualFor(SpeciesPopulation speciesPopulation)
{
if (!_indvidualCacheProSpecies.Contains(speciesPopulation))
{
var individualDTO = _individualDefaultValueRetriever.DefaultSettingFor(speciesPopulation);
_indvidualCacheProSpecies[speciesPopulation] = _individualFactory.CreateStandardFor(_individualSettingsMapper.MapFrom(individualDTO));
}
return(_indvidualCacheProSpecies[speciesPopulation]);
}
public PKSim.Core.Model.Individual MapFrom(IndividualSettingsDTO individualSettingsDTO)
{
return(_individualFactory.CreateAndOptimizeFor(_mapper.MapFrom(individualSettingsDTO)));
}
public Individual MapFrom(IndividualSettingsDTO individualSettingsDTO)
{
return(_individualFactory.CreateAndOptimizeFor(_originDataMapper.MapFrom(individualSettingsDTO)));
}