/// <summary>
/// Maps the outbound resource to FHIR.
/// </summary>
/// <param name="model">The model.</param>
/// <returns>Returns the mapped FHIR resource.</returns>
protected override ImmunizationRecommendation MapToFhir(SubstanceAdministration model)
{
ImmunizationRecommendation retVal = new ImmunizationRecommendation();
retVal.Id = model.Key.ToString();
retVal.DateElement = new FhirDateTime(DateTimeOffset.Now);
retVal.Identifier = model.Identifiers.Select(o => DataTypeConverter.ToFhirIdentifier(o)).ToList();
var rct = model.LoadCollection <ActParticipation>(nameof(Act.Participations)).FirstOrDefault(o => o.ParticipationRoleKey == ActParticipationKey.RecordTarget)?.LoadProperty <Entity>(nameof(ActParticipation.PlayerEntity));
if (rct != null)
{
retVal.Patient = DataTypeConverter.CreateNonVersionedReference <Patient>(rct);
}
var mat = model.Participations.FirstOrDefault(o => o.ParticipationRoleKey == ActParticipationKey.Product).PlayerEntity;
// Recommend
string status = (model.StopTime ?? model.ActTime) < DateTimeOffset.Now ? "overdue" : "due";
var recommendation = new ImmunizationRecommendation.RecommendationComponent()
{
DoseNumber = new PositiveInt(model.SequenceId),
VaccineCode = new List <CodeableConcept>()
{
DataTypeConverter.ToFhirCodeableConcept(mat?.TypeConceptKey)
},
ForecastStatus = new CodeableConcept("http://hl7.org/fhir/conceptset/immunization-recommendation-status", status),
DateCriterion = new List <ImmunizationRecommendation.DateCriterionComponent>()
{
new ImmunizationRecommendation.DateCriterionComponent()
{
Code = new CodeableConcept("http://hl7.org/fhir/conceptset/immunization-recommendation-date-criterion", "recommended"),
ValueElement = new FhirDateTime(model.ActTime)
}
}
};
if (model.StartTime.HasValue)
{
recommendation.DateCriterion.Add(new ImmunizationRecommendation.DateCriterionComponent()
{
Code = new CodeableConcept("http://hl7.org/fhir/conceptset/immunization-recommendation-date-criterion", "earliest"),
ValueElement = new FhirDateTime(model.StartTime.Value)
});
}
if (model.StopTime.HasValue)
{
recommendation.DateCriterion.Add(new ImmunizationRecommendation.DateCriterionComponent()
{
Code = new CodeableConcept("http://hl7.org/fhir/conceptset/immunization-recommendation-date-criterion", "overdue"),
ValueElement = new FhirDateTime(model.StopTime.Value)
});
}
retVal.Recommendation = new List <ImmunizationRecommendation.RecommendationComponent>()
{
recommendation
};
return(retVal);
}
/// <summary>
/// Map to FHIR
/// </summary>
protected override Hl7.Fhir.Model.Organization MapToFhir(Core.Model.Entities.Organization model)
{
var retVal = DataTypeConverter.CreateResource <Hl7.Fhir.Model.Organization>(model);
retVal.Identifier = model.LoadCollection(o => o.Identifiers).Select(o => DataTypeConverter.ToFhirIdentifier(o)).ToList();
retVal.Active = StatusKeys.ActiveStates.Contains(model.StatusConceptKey.Value);
retVal.Telecom = model.LoadCollection(o => o.Telecoms).Select(DataTypeConverter.ToFhirTelecom).ToList();
retVal.Address = model.LoadCollection(o => o.Addresses).Select(DataTypeConverter.ToFhirAddress).ToList();
retVal.Name = model.LoadCollection(o => o.Names).FirstOrDefault(o => o.NameUseKey == NameUseKeys.OfficialRecord)?.ToDisplay();
retVal.Alias = model.LoadCollection(o => o.Names).Where(o => o.NameUseKey == NameUseKeys.Pseudonym).Select(o => o.ToDisplay());
var parent = model.LoadCollection(o => o.Relationships).FirstOrDefault(o => o.RelationshipTypeKey == EntityRelationshipTypeKeys.Parent);
if (parent != null)
{
retVal.PartOf = DataTypeConverter.CreateNonVersionedReference <Hl7.Fhir.Model.Organization>(parent.TargetEntityKey);
}
return(retVal);
}
/// <inheritdoc/>
protected override AdverseEvent MapToFhir(Act model)
{
var retVal = DataTypeConverter.CreateResource <AdverseEvent>(model);
retVal.Identifier = DataTypeConverter.ToFhirIdentifier(model.Identifiers.FirstOrDefault());
retVal.Category = new List <CodeableConcept>
{
DataTypeConverter.ToFhirCodeableConcept(model.TypeConceptKey)
};
var recordTarget = model.LoadCollection <ActParticipation>("Participations").FirstOrDefault(o => o.ParticipationRoleKey == ActParticipationKey.RecordTarget);
if (recordTarget != null)
{
retVal.Subject = DataTypeConverter.CreateVersionedReference <Patient>(recordTarget.LoadProperty <Entity>("PlayerEntity"));
}
// Main topic of the concern
var subject = model.LoadCollection <ActRelationship>("Relationships").FirstOrDefault(o => o.RelationshipTypeKey == ActRelationshipTypeKeys.HasSubject)?.LoadProperty <Act>("TargetAct");
if (subject == null)
{
throw new InvalidOperationException(this.m_localizationService.GetString("error.messaging.fhir.adverseEvent.act"));
}
retVal.DateElement = new FhirDateTime(subject.ActTime);
// Reactions = HasManifestation
var reactions = subject.LoadCollection <ActRelationship>("Relationships").Where(o => o.RelationshipTypeKey == ActRelationshipTypeKeys.HasManifestation).FirstOrDefault();
if (reactions != null)
{
retVal.Event = DataTypeConverter.ToFhirCodeableConcept(reactions.LoadProperty <CodedObservation>("TargetAct").ValueKey);
}
var location = model.LoadCollection <ActParticipation>("Participations").FirstOrDefault(o => o.ParticipationRoleKey == ActParticipationKey.Location);
if (location != null)
{
retVal.Location = DataTypeConverter.CreateVersionedReference <Location>(location.LoadProperty <Entity>("PlayerEntity"));
}
// Severity
var severity = subject.LoadCollection <ActRelationship>("Relationships").First(o => o.RelationshipTypeKey == ActRelationshipTypeKeys.HasComponent && o.LoadProperty <Act>("TargetAct").TypeConceptKey == ObservationTypeKeys.Severity);
if (severity != null)
{
retVal.Severity = DataTypeConverter.ToFhirCodeableConcept(severity.LoadProperty <CodedObservation>("TargetAct").ValueKey, "http://terminology.hl7.org/CodeSystem/adverse-event-severity");
}
// Did the patient die?
var causeOfDeath = model.LoadCollection <ActRelationship>("Relationships").FirstOrDefault(o => o.RelationshipTypeKey == ActRelationshipTypeKeys.IsCauseOf && o.LoadProperty <Act>("TargetAct").TypeConceptKey == ObservationTypeKeys.ClinicalState && (o.TargetAct as CodedObservation)?.ValueKey == Guid.Parse("6df3720b-857f-4ba2-826f-b7f1d3c3adbb"));
if (causeOfDeath != null)
{
retVal.Outcome = new CodeableConcept("http://hl7.org/fhir/adverse-event-outcome", "fatal");
}
else if (model.StatusConceptKey == StatusKeys.Active)
{
retVal.Outcome = new CodeableConcept("http://hl7.org/fhir/adverse-event-outcome", "ongoing");
}
else if (model.StatusConceptKey == StatusKeys.Completed)
{
retVal.Outcome = new CodeableConcept("http://hl7.org/fhir/adverse-event-outcome", "resolved");
}
var author = model.LoadCollection <ActParticipation>("Participations").FirstOrDefault(o => o.ParticipationRoleKey == ActParticipationKey.Authororiginator);
if (author != null)
{
retVal.Recorder = DataTypeConverter.CreateNonVersionedReference <Practitioner>(author.LoadProperty <Entity>("PlayerEntity"));
}
// Suspect entities
var refersTo = model.LoadCollection <ActRelationship>("Relationships").Where(o => o.RelationshipTypeKey == ActRelationshipTypeKeys.RefersTo).ToArray();
if (refersTo.Any())
{
retVal.SuspectEntity = refersTo.Select(o => o.LoadProperty <Act>("TargetAct")).OfType <SubstanceAdministration>().Select(o =>
{
var consumable = o.LoadCollection <ActParticipation>("Participations").FirstOrDefault(x => x.ParticipationRoleKey == ActParticipationKey.Consumable)?.LoadProperty <ManufacturedMaterial>("PlayerEntity");
if (consumable == null)
{
var product = o.LoadCollection <ActParticipation>("Participations").FirstOrDefault(x => x.ParticipationRoleKey == ActParticipationKey.Product)?.LoadProperty <Material>("PlayerEntity");
return(new AdverseEvent.SuspectEntityComponent
{
Instance = DataTypeConverter.CreateNonVersionedReference <Substance>(product)
});
}
return(new AdverseEvent.SuspectEntityComponent
{
Instance = DataTypeConverter.CreateNonVersionedReference <Medication>(consumable)
});
}).ToList();
}
return(retVal);
}
/// <summary>
/// Map a patient object to FHIR.
/// </summary>
/// <param name="model">The patient to map to FHIR</param>
/// <returns>Returns the mapped FHIR resource.</returns>
protected override Patient MapToFhir(Core.Model.Roles.Patient model)
{
// If the model is being constructed as part of a bundle, then the caller
// should have included the bundle so we can add any related resources
var partOfBundle = model.GetAnnotations <Bundle>().FirstOrDefault();
var retVal = DataTypeConverter.CreateResource <Patient>(model);
retVal.Active = StatusKeys.ActiveStates.Contains(model.StatusConceptKey.Value);
retVal.Address = model.GetAddresses().Select(DataTypeConverter.ToFhirAddress).ToList();
if (model.DateOfBirth.HasValue)
{
switch (model.DateOfBirthPrecision.GetValueOrDefault())
{
case DatePrecision.Day:
retVal.BirthDate = model.DateOfBirth.Value.ToString("yyyy-MM-dd");
break;
case DatePrecision.Month:
retVal.BirthDate = model.DateOfBirth.Value.ToString("yyyy-MM");
break;
case DatePrecision.Year:
retVal.BirthDate = model.DateOfBirth.Value.ToString("yyyy");
break;
}
}
// Deceased precision
if (model.DeceasedDate.HasValue)
{
if (model.DeceasedDate == DateTime.MinValue)
{
retVal.Deceased = new FhirBoolean(true);
}
else
{
switch (model.DeceasedDatePrecision)
{
case DatePrecision.Day:
retVal.Deceased = new FhirDateTime(model.DeceasedDate.Value.Year, model.DeceasedDate.Value.Month, model.DeceasedDate.Value.Day);
break;
case DatePrecision.Month:
retVal.Deceased = new FhirDateTime(model.DeceasedDate.Value.Year, model.DeceasedDate.Value.Month);
break;
case DatePrecision.Year:
retVal.Deceased = new FhirDateTime(model.DeceasedDate.Value.Year);
break;
default:
retVal.Deceased = DataTypeConverter.ToFhirDateTime(model.DeceasedDate);
break;
}
}
}
if (model.GenderConceptKey.HasValue)
{
retVal.Gender = DataTypeConverter.ToFhirEnumeration <AdministrativeGender>(model.GenderConceptKey, "http://hl7.org/fhir/administrative-gender", true);
}
retVal.Identifier = model.Identifiers?.Select(DataTypeConverter.ToFhirIdentifier).ToList();
retVal.MultipleBirth = model.MultipleBirthOrder == 0 ? (DataType) new FhirBoolean(true) : model.MultipleBirthOrder.HasValue ? new Integer(model.MultipleBirthOrder.Value) : null;
retVal.Name = model.GetNames().Select(DataTypeConverter.ToFhirHumanName).ToList();
retVal.Telecom = model.GetTelecoms().Select(DataTypeConverter.ToFhirTelecom).ToList();
retVal.Communication = model.GetPersonLanguages().Select(DataTypeConverter.ToFhirCommunicationComponent).ToList();
foreach (var rel in model.GetRelationships().Where(o => !o.InversionIndicator))
{
if (rel.RelationshipTypeKey == EntityRelationshipTypeKeys.Contact)
{
var relEntity = rel.LoadProperty(o => o.TargetEntity);
if (relEntity is Core.Model.Entities.Person person)
{
var contact = new Patient.ContactComponent()
{
ElementId = $"{person.Key}",
Address = DataTypeConverter.ToFhirAddress(person.GetAddresses().FirstOrDefault()),
Relationship = new List <CodeableConcept>()
{
DataTypeConverter.ToFhirCodeableConcept(rel.RelationshipRoleKey, "http://terminology.hl7.org/CodeSystem/v2-0131"),
DataTypeConverter.ToFhirCodeableConcept(rel.RelationshipTypeKey, "http://terminology.hl7.org/CodeSystem/v2-0131")
}.OfType <CodeableConcept>().ToList(),
Name = DataTypeConverter.ToFhirHumanName(person.GetNames().FirstOrDefault()),
// TODO: Gender
Gender = DataTypeConverter.ToFhirEnumeration <AdministrativeGender>(person.GenderConceptKey, "http://hl7.org/fhir/administrative-gender"),
Telecom = person.GetTelecoms().Select(t => DataTypeConverter.ToFhirTelecom(t)).ToList()
};
var scoper = person.LoadCollection(o => o.Relationships).FirstOrDefault(o => o.RelationshipTypeKey == EntityRelationshipTypeKeys.Scoper);
if (scoper != null)
{
contact.Organization = DataTypeConverter.CreateNonVersionedReference <Hl7.Fhir.Model.Organization>(scoper.LoadProperty(o => o.TargetEntity));
}
DataTypeConverter.AddExtensions(person, contact);
retVal.Contact.Add(contact);
}
else if (relEntity is Core.Model.Entities.Organization org) // it *IS* an organization
{
var contact = new Patient.ContactComponent()
{
ElementId = $"{org.Key}",
Relationship = new List <CodeableConcept>()
{
DataTypeConverter.ToFhirCodeableConcept(rel.RelationshipRoleKey, "http://terminology.hl7.org/CodeSystem/v2-0131"),
DataTypeConverter.ToFhirCodeableConcept(rel.RelationshipTypeKey, "http://terminology.hl7.org/CodeSystem/v2-0131")
}.OfType <CodeableConcept>().ToList(),
Organization = DataTypeConverter.CreateNonVersionedReference <Hl7.Fhir.Model.Organization>(org)
};
retVal.Contact.Add(contact);
}
}
else if (rel.RelationshipTypeKey == EntityRelationshipTypeKeys.Scoper)
{
var scoper = rel.LoadProperty(o => o.TargetEntity);
retVal.ManagingOrganization = DataTypeConverter.CreateNonVersionedReference <Hl7.Fhir.Model.Organization>(scoper);
// If this is part of a bundle, include it
partOfBundle?.Entry.Add(new Bundle.EntryComponent
{
FullUrl = $"{MessageUtil.GetBaseUri()}/Organization/{scoper.Key}",
Resource = FhirResourceHandlerUtil.GetMapperForInstance(scoper).MapToFhir(scoper)
});
}
else if (rel.RelationshipTypeKey == EntityRelationshipTypeKeys.HealthcareProvider)
{
var practitioner = rel.LoadProperty(o => o.TargetEntity);
retVal.GeneralPractitioner.Add(DataTypeConverter.CreateVersionedReference <Practitioner>(practitioner));
// If this is part of a bundle, include it
partOfBundle?.Entry.Add(new Bundle.EntryComponent
{
FullUrl = $"{MessageUtil.GetBaseUri()}/Practitioner/{practitioner.Key}",
Resource = FhirResourceHandlerUtil.GetMapperForInstance(practitioner).MapToFhir(practitioner)
});
}
else if (rel.RelationshipTypeKey == EntityRelationshipTypeKeys.Replaces)
{
retVal.Link.Add(this.CreateLink <Patient>(rel.TargetEntityKey.Value, Patient.LinkType.Replaces));
}
else if (rel.RelationshipTypeKey == EntityRelationshipTypeKeys.Duplicate)
{
retVal.Link.Add(this.CreateLink <Patient>(rel.TargetEntityKey.Value, Patient.LinkType.Seealso));
}
else if (rel.RelationshipTypeKey == MDM_MASTER_LINK) // HACK: MDM Master Record
{
if (rel.SourceEntityKey.HasValue && rel.SourceEntityKey != model.Key)
{
retVal.Link.Add(this.CreateLink <Patient>(rel.SourceEntityKey.Value, Patient.LinkType.Seealso));
}
else // Is a local
{
retVal.Link.Add(this.CreateLink <Patient>(rel.TargetEntityKey.Value, Patient.LinkType.Refer));
}
}
else if (rel.ClassificationKey == EntityRelationshipTypeKeys.EquivalentEntity)
{
retVal.Link.Add(this.CreateLink <Patient>(rel.TargetEntityKey.Value, Patient.LinkType.Refer));
}
else if (partOfBundle != null) // This is part of a bundle and we need to include it
{
// HACK: This piece of code is used to add any RelatedPersons to the container bundle if it is part of a bundle
if (this.GetRelatedPersonConceptUuids().Contains(rel.RelationshipTypeKey.Value))
{
var relative = FhirResourceHandlerUtil.GetMapperForInstance(rel).MapToFhir(rel);
partOfBundle.Entry.Add(new Bundle.EntryComponent()
{
FullUrl = $"{MessageUtil.GetBaseUri()}/RelatedPerson/{rel.Key}",
Resource = relative
});
}
}
}
// Reverse relationships of family member?
var uuids = model.Relationships.Where(r => r.RelationshipTypeKey == MDM_MASTER_LINK).Select(r => r.SourceEntityKey).Union(new Guid?[] { model.Key }).ToArray();
var familyMemberConcepts = this.GetFamilyMemberUuids();
var reverseRelationships = this.m_erRepository.Find(o => uuids.Contains(o.TargetEntityKey) && familyMemberConcepts.Contains(o.RelationshipTypeKey.Value) && o.ObsoleteVersionSequenceId == null);
foreach (var rrv in reverseRelationships)
{
retVal.Link.Add(new Patient.LinkComponent
{
Type = Patient.LinkType.Seealso,
Other = DataTypeConverter.CreateNonVersionedReference <RelatedPerson>(rrv)
});
// If this is part of a bundle, include it
partOfBundle?.Entry.Add(new Bundle.EntryComponent
{
FullUrl = $"{MessageUtil.GetBaseUri()}/RelatedPerson/{rrv.Key}",
Resource = FhirResourceHandlerUtil.GetMappersFor(ResourceType.RelatedPerson).First().MapToFhir(rrv)
});
}
// Was this record replaced?
if (!retVal.Active.GetValueOrDefault())
{
var replacedRelationships = this.m_erRepository.Find(o => uuids.Contains(o.TargetEntityKey) && o.RelationshipTypeKey == EntityRelationshipTypeKeys.Replaces && o.ObsoleteVersionSequenceId == null);
foreach (var repl in replacedRelationships)
{
retVal.Link.Add(new Patient.LinkComponent()
{
Type = Patient.LinkType.ReplacedBy,
Other = DataTypeConverter.CreateNonVersionedReference <Patient>(repl.LoadProperty(o => o.SourceEntity)),
});
}
}
var photo = model.LoadCollection(o => o.Extensions).FirstOrDefault(o => o.ExtensionTypeKey == ExtensionTypeKeys.JpegPhotoExtension);
if (photo != null)
{
retVal.Photo = new List <Attachment>
{
new Attachment
{
ContentType = "image/jpg",
Data = photo.ExtensionValueXml
}
};
}
return(retVal);
}
/// <summary>
/// Create patient link
/// </summary>
private Patient.LinkComponent CreateLink <TLink>(Guid targetEntityKey, Patient.LinkType type) where TLink : DomainResource, new() => new Patient.LinkComponent()
{
Type = type,
Other = DataTypeConverter.CreateNonVersionedReference <TLink>(targetEntityKey)
};
/// <summary>
/// Map the specified patient encounter to a FHIR based encounter
/// </summary>
protected override Encounter MapToFhir(PatientEncounter model)
{
var retVal = DataTypeConverter.CreateResource <Encounter>(model);
// Map the identifier
retVal.Identifier = model.LoadCollection <ActIdentifier>("Identifiers").Select(o => DataTypeConverter.ToFhirIdentifier(o)).ToList();
// Map status keys
switch (model.StatusConceptKey.ToString().ToUpper())
{
case StatusKeyStrings.Active:
case StatusKeyStrings.New:
switch (model.MoodConceptKey.ToString().ToUpper())
{
case MoodConceptKeyStrings.Eventoccurrence:
case MoodConceptKeyStrings.Request:
retVal.Status = Encounter.EncounterStatus.InProgress;
break;
case MoodConceptKeyStrings.Intent:
case MoodConceptKeyStrings.Promise:
retVal.Status = Encounter.EncounterStatus.Planned;
break;
}
break;
case StatusKeyStrings.Cancelled:
retVal.Status = Encounter.EncounterStatus.Cancelled;
break;
case StatusKeyStrings.Nullified:
retVal.Status = Encounter.EncounterStatus.EnteredInError;
break;
case StatusKeyStrings.Obsolete:
retVal.Status = Encounter.EncounterStatus.Unknown;
break;
case StatusKeyStrings.Completed:
retVal.Status = Encounter.EncounterStatus.Finished;
break;
}
if (model.StartTime.HasValue || model.StopTime.HasValue)
{
retVal.Period = DataTypeConverter.ToPeriod(model.StartTime, model.StopTime);
}
else
{
retVal.Period = DataTypeConverter.ToPeriod(model.ActTime, model.ActTime);
}
retVal.ReasonCode = new List <CodeableConcept>
{
DataTypeConverter.ToFhirCodeableConcept(model.ReasonConceptKey)
};
retVal.Class = DataTypeConverter.ToFhirCodeableConcept(model.TypeConceptKey).GetCoding();
// Map associated
var associated = model.LoadCollection <ActParticipation>("Participations").ToArray();
// Subject of encounter
retVal.Subject = DataTypeConverter.CreateNonVersionedReference <Patient>(associated.FirstOrDefault(o => o.ParticipationRoleKey == ActParticipationKey.RecordTarget)?.LoadProperty <Entity>("PlayerEntity"));
// Locations
retVal.Location = associated.Where(o => o.LoadProperty <Entity>("PlayerEntity") is Place).Select(o => new Encounter.LocationComponent
{
Period = DataTypeConverter.ToPeriod(model.CreationTime, null),
Location = DataTypeConverter.CreateVersionedReference <Location>(o.PlayerEntity)
}).ToList();
// Service provider
var cst = associated.FirstOrDefault(o => o.LoadProperty <Entity>("PlayerEntity") is Organization && o.ParticipationRoleKey == ActParticipationKey.Custodian);
if (cst != null)
{
retVal.ServiceProvider = DataTypeConverter.CreateVersionedReference <Hl7.Fhir.Model.Organization>(cst.PlayerEntity);
}
// Participants
retVal.Participant = associated.Where(o => o.LoadProperty <Entity>("PlayerEntity") is Provider || o.LoadProperty <Entity>("PlayerEntity") is UserEntity).Select(o => new Encounter.ParticipantComponent
{
Type = new List <CodeableConcept>
{
DataTypeConverter.ToFhirCodeableConcept(o.ParticipationRoleKey)
},
Individual = DataTypeConverter.CreateVersionedReference <Practitioner>(o.PlayerEntity)
}).ToList();
return(retVal);
}
/// <summary>
/// Maps the object to model to fhir
/// </summary>
protected override MedicationAdministration MapToFhir(SubstanceAdministration model)
{
var retVal = DataTypeConverter.CreateResource <MedicationAdministration>(model);
retVal.Identifier = model.LoadCollection <ActIdentifier>(nameof(Act.Identifiers)).Select(DataTypeConverter.ToFhirIdentifier).ToList();
retVal.StatusReason = new List <CodeableConcept> {
DataTypeConverter.ToFhirCodeableConcept(model.ReasonConceptKey)
};
switch (model.StatusConceptKey.ToString().ToUpper())
{
case StatusKeyStrings.Active:
retVal.Status = MedicationAdministration.MedicationAdministrationStatusCodes.InProgress;
break;
case StatusKeyStrings.Cancelled:
retVal.Status = MedicationAdministration.MedicationAdministrationStatusCodes.Stopped;
break;
case StatusKeyStrings.Nullified:
retVal.Status = MedicationAdministration.MedicationAdministrationStatusCodes.EnteredInError;
break;
case StatusKeyStrings.Completed:
retVal.Status = MedicationAdministration.MedicationAdministrationStatusCodes.Completed;
break;
case StatusKeyStrings.Obsolete:
retVal.Status = MedicationAdministration.MedicationAdministrationStatusCodes.Unknown;
break;
}
if (model.IsNegated)
{
retVal.Status = MedicationAdministration.MedicationAdministrationStatusCodes.NotDone;
}
retVal.Category = DataTypeConverter.ToFhirCodeableConcept(model.TypeConceptKey, "http://hl7.org/fhir/medication-admin-category");
var consumableRelationship = model.LoadCollection <ActParticipation>(nameof(Act.Participations)).FirstOrDefault(o => o.ParticipationRoleKey == ActParticipationKey.Consumable);
var productRelationship = model.LoadCollection <ActParticipation>(nameof(Act.Participations)).FirstOrDefault(o => o.ParticipationRoleKey == ActParticipationKey.Product);
if (consumableRelationship != null)
{
retVal.Medication = DataTypeConverter.CreateVersionedReference <Medication>(consumableRelationship.LoadProperty <ManufacturedMaterial>("PlayerEntity"));
}
else if (productRelationship != null)
{
retVal.Medication = DataTypeConverter.CreateVersionedReference <Substance>(productRelationship.LoadProperty <Material>("PlayerEntity"));
//retVal.Medication = DataTypeConverter.ToFhirCodeableConcept(productRelationship.LoadProperty<Material>("PlayerEntity").LoadProperty<Concept>("TypeConcept"));
}
var rct = model.LoadCollection <ActParticipation>(nameof(Act.Participations)).FirstOrDefault(o => o.ParticipationRoleKey == ActParticipationKey.RecordTarget);
if (rct != null)
{
retVal.Subject = DataTypeConverter.CreateVersionedReference <Patient>(rct.LoadProperty <Entity>("PlayerEntity"));
}
// Encounter
var erService = ApplicationServiceContext.Current.GetService <IDataPersistenceService <EntityRelationship> >();
var tr = 0;
var enc = erService.Query(o => o.TargetEntityKey == model.Key && o.RelationshipTypeKey == ActRelationshipTypeKeys.HasComponent && o.ObsoleteVersionSequenceId == null, 0, 10, out tr, AuthenticationContext.Current.Principal);
if (enc != null)
{
retVal.EventHistory = enc.Select(o => DataTypeConverter.CreateNonVersionedReference <Encounter>(o.TargetEntityKey)).ToList();
// TODO: Encounter
}
// Effective time
retVal.Effective = DataTypeConverter.ToPeriod(model.StartTime ?? model.ActTime, model.StopTime);
// performer
var performer = model.LoadCollection <ActParticipation>(nameof(Act.Participations)).Where(o => o.ParticipationRoleKey == ActParticipationKey.Performer || o.ParticipationRoleKey == ActParticipationKey.Authororiginator);
retVal.Performer = performer.Select(o => new MedicationAdministration.PerformerComponent
{
Actor = DataTypeConverter.CreateVersionedReference <Practitioner>(o.LoadProperty <Entity>(nameof(ActParticipation.PlayerEntity)))
}).ToList();
retVal.Dosage = new MedicationAdministration.DosageComponent
{
Site = DataTypeConverter.ToFhirCodeableConcept(model.SiteKey),
Route = DataTypeConverter.ToFhirCodeableConcept(model.RouteKey),
Dose = new Quantity
{
Value = model.DoseQuantity,
Unit = DataTypeConverter.ToFhirCodeableConcept(model.DoseUnitKey, "http://hl7.org/fhir/sid/ucum").GetCoding()?.Code
}
};
return(retVal);
}
/// <summary>
/// Map to FHIR
/// </summary>
protected override Observation MapToFhir(Core.Model.Acts.Observation model)
{
var retVal = DataTypeConverter.CreateResource <Observation>(model);
retVal.Identifier = model.LoadCollection <ActIdentifier>(nameof(Act.Identifiers)).Select(o => DataTypeConverter.ToFhirIdentifier(o)).ToList();
switch (model.StatusConceptKey.ToString().ToUpper())
{
case StatusKeyStrings.New:
case StatusKeyStrings.Active:
retVal.Status = ObservationStatus.Preliminary;
break;
case StatusKeyStrings.Cancelled:
retVal.Status = ObservationStatus.Cancelled;
break;
case StatusKeyStrings.Nullified:
retVal.Status = ObservationStatus.EnteredInError;
break;
case StatusKeyStrings.Completed:
if (model.LoadCollection <ActRelationship>(nameof(Act.Relationships)).Any(o => o.RelationshipTypeKey == ActRelationshipTypeKeys.Replaces)) // was amended
{
retVal.Status = ObservationStatus.Amended;
}
else
{
retVal.Status = ObservationStatus.Final;
}
break;
case StatusKeyStrings.Obsolete:
retVal.Status = ObservationStatus.Unknown;
break;
}
if (model.StartTime.HasValue || model.StopTime.HasValue)
{
retVal.Effective = DataTypeConverter.ToPeriod(model.StartTime, model.StopTime);
}
else
{
retVal.Effective = DataTypeConverter.ToFhirDateTime(model.ActTime);
}
retVal.Code = DataTypeConverter.ToFhirCodeableConcept(model.TypeConceptKey);
// RCT
var rct = model.LoadCollection <ActParticipation>(nameof(Act.Participations)).FirstOrDefault(o => o.ParticipationRoleKey == ActParticipationKey.RecordTarget);
if (rct != null)
{
retVal.Subject = DataTypeConverter.CreateNonVersionedReference <Patient>(rct.LoadProperty <Entity>(nameof(ActParticipation.PlayerEntity)));
}
// Performer
retVal.Performer = model.Participations.Where(o => o.ParticipationRoleKey == ActParticipationKey.Performer)
.Select(o => DataTypeConverter.CreateNonVersionedReference <Practitioner>(o.LoadProperty <Entity>(nameof(ActParticipation.PlayerEntity))))
.ToList();
retVal.Issued = model.CreationTime;
// Value
switch (model.ValueType)
{
case "CD":
retVal.Value = DataTypeConverter.ToFhirCodeableConcept((model as CodedObservation).ValueKey);
break;
case "PQ":
var qty = model as QuantityObservation;
retVal.Value = DataTypeConverter.ToQuantity(qty.Value, qty.UnitOfMeasureKey);
break;
case "ED":
case "ST":
retVal.Value = new FhirString((model as TextObservation).Value);
break;
}
if (model.InterpretationConceptKey.HasValue)
{
retVal.Interpretation = new List <CodeableConcept>
{
DataTypeConverter.ToFhirCodeableConcept(model.InterpretationConceptKey)
};
}
return(retVal);
}