public void RemoveBackgroundLoader(BackgroundLoader loader)
{
_backgroundLoaders.Remove(loader);
}
public LoadMonitor(BackgroundLoader manager, IDocumentContainer container, object tag)
{
_manager = manager;
_container = container;
_tag = tag;
}
public void AddBackgroundLoader(BackgroundLoader loader)
{
_backgroundLoaders.Add(loader);
}
public void Unregister(BackgroundLoader loader)
{
loader.ProgressUpdateEvent -= UpdateProgress;
}
public void Register(BackgroundLoader loader)
{
loader.ProgressUpdateEvent += UpdateProgress;
}
public LoadMonitor(BackgroundLoader manager, IDocumentContainer container, object tag)
{
_manager = manager;
_container = container;
_tag = tag;
}
private static SrmDocument CreateLibraryDocument(SrmSettings settings, string textFasta, bool peptideList,
TestDocumentContainer docContainer, BackgroundLoader libraryManager, out int startRev)
{
startRev = 0;
SrmDocument document = new SrmDocument(SrmSettingsList.GetDefault0_6());
Assert.IsTrue(docContainer.SetDocument(document, null));
// Register after first set document
libraryManager.Register(docContainer);
// Add libraries
SrmDocument docLibraries = document.ChangeSettings(settings);
++startRev;
// Add some FASTA
IdentityPath path = IdentityPath.ROOT;
SrmDocument docFasta = docLibraries.ImportFasta(new StringReader(textFasta), peptideList, path, out path);
++startRev;
// Until libraries are loaded, only the sequences should appear
if (!peptideList)
AssertEx.IsDocumentState(docFasta, startRev, textFasta.Count(c => c == '>'), 0, 0);
// Run the library load
Assert.IsTrue(docContainer.SetDocument(docFasta, document, true));
++startRev;
// After library load completes peptides and transitions should have expected library info
SrmDocument docLoaded = docContainer.Document;
// Check expected library inforamation
foreach (var nodePeptide in docLoaded.Peptides)
Assert.IsNull(nodePeptide.Rank);
foreach (var nodeTran in docLoaded.PeptideTransitions)
{
Assert.IsTrue(nodeTran.HasLibInfo);
Assert.IsTrue(nodeTran.LibInfo.Rank <= 3);
}
return docLoaded;
}