public List <AnatomicEntity> GetAllAvailableEntities()
{
List <AnatomicEntity> entities = new List <AnatomicEntity>(AnatomicEntity.GetAllAvailableEntities());
CollectionUtils.Remove(entities, delegate(AnatomicEntity entity) { return(_anatomicEntities.Contains(entity)); });
return(entities);
}
public override void Execute()
{
List <AIMSearchResult> results = new List <AIMSearchResult>();
List <aim_dotnet.Annotation> annotations = null;
try
{
if (_aimQueryParameters.AnnotationType == AnnotationType.ImageAnnotation)
{
AIMTCGAImageAnnotation aimService = new AIMTCGAImageAnnotation();
annotations = aimService.getImageAnnotationInfoList(_aimQueryParameters);
}
else if (_aimQueryParameters.AnnotationType == AnnotationType.AnnotationOfAnnotation)
{
AIMTCGAAnnotationOfAnnotation aimService = new AIMTCGAAnnotationOfAnnotation();
annotations = aimService.getAnnotationOfAnnotationInfoList(_aimQueryParameters);
}
}
catch (GridServicerException ex)
{
SetError(string.Format("{0}. Contact your system administrator", ex.Message));
}
if (annotations != null)
{
foreach (aim_dotnet.Annotation annotation in annotations)
{
AIMSearchResult result = new AIMSearchResult();
result.RetrievedAnnotation = annotation;
if (annotation.AnatomyEntityCollection != null)
{
foreach (aim_dotnet.AnatomicEntity anatomicEntity in annotation.AnatomyEntityCollection)
{
AnatomicEntity ae = new AnatomicEntity();
ae.CodeValue = anatomicEntity.CodeValue;
ae.CodeMeaning = anatomicEntity.CodeMeaning;
ae.CodingSchemeDesignator = anatomicEntity.CodingSchemeDesignator;
result.AnatomicEntities.Add(ae);
if (anatomicEntity.AnatomicEntityCharacteristicCollection != null)
{
foreach (aim_dotnet.AnatomicEntityCharacteristic characteristic in anatomicEntity.AnatomicEntityCharacteristicCollection)
{
AnatomicEntityCharacteristic aec = new AnatomicEntityCharacteristic();
aec.CodeValue = characteristic.CodeValue;
aec.CodeMeaning = characteristic.CodeMeaning;
aec.CodingSchemeDesignator = characteristic.CodingSchemeDesignator;
result.AnatomicEntityCharacteristics.Add(aec);
}
}
}
}
if (annotation.ImagingObservationCollection != null)
{
foreach (aim_dotnet.ImagingObservation imagingObservation in annotation.ImagingObservationCollection)
{
ImagingObservation io = new ImagingObservation();
io.CodeValue = imagingObservation.CodeValue;
io.CodeMeaning = imagingObservation.CodeMeaning;
io.CodingSchemeDesignator = imagingObservation.CodingSchemeDesignator;
result.ImagingObservations.Add(io);
if (imagingObservation.ImagingObservationCharacteristicCollection != null)
{
foreach (aim_dotnet.ImagingObservationCharacteristic characteristic in imagingObservation.ImagingObservationCharacteristicCollection)
{
ImagingObservationCharacteristic ioc = new ImagingObservationCharacteristic();
ioc.CodeValue = characteristic.CodeValue;
ioc.CodeMeaning = characteristic.CodeMeaning;
ioc.CodingSchemeDesignator = characteristic.CodingSchemeDesignator;
ioc.Comment = characteristic.Comment;
result.ImagingObservationCharacteristics.Add(ioc);
}
}
}
}
if (annotation.User != null)
{
User user = new User();
user.Name = annotation.User.Name;
user.LoginName = annotation.User.LoginName;
user.RoleInTrial = annotation.User.RoleInTrial;
user.NumberWithinRoleInClinicalTrial = annotation.User.NumberWithinRoleOfClinicalTrial;
result.User = user;
}
if (annotation is aim_dotnet.ImageAnnotation)
{
aim_dotnet.ImageAnnotation imageAnnotation = (aim_dotnet.ImageAnnotation)annotation;
// Study Instance UID
if (imageAnnotation.ImageReferenceCollection != null && imageAnnotation.ImageReferenceCollection.Count > 0)
{
aim_dotnet.DICOMImageReference dicomImageReference =
imageAnnotation.ImageReferenceCollection[0] as aim_dotnet.DICOMImageReference;
if (dicomImageReference != null)
{
result.Study.StudyInstanceUid = dicomImageReference.Study.InstanceUID;
}
}
if (imageAnnotation.Patient != null)
{
result.Patient.PatientId = imageAnnotation.Patient.Id.ToString();
result.Patient.PatientsName = imageAnnotation.Patient.Name;
result.Patient.PatientsSex = imageAnnotation.Patient.Sex;
result.Patient.PatientBirthDate = imageAnnotation.Patient.BirthDate;
}
foreach (aim_dotnet.ImageReference imageReference in imageAnnotation.ImageReferenceCollection)
{
if (imageReference is aim_dotnet.DICOMImageReference)
{
aim_dotnet.DICOMImageReference dicomImageReference = (aim_dotnet.DICOMImageReference)imageReference;
result.Series.SeriesInstanceUid = ((dicomImageReference.Study ?? new aim_dotnet.ImageStudy()).Series ?? new aim_dotnet.ImageSeries()).InstanceUID;
}
}
}
results.Add(result);
}
}
AddResultsToTable(results);
OnCommandExecuted();
}