/// <summary>
/// Goes through each record in the training set and displays the ideal output and the actual output.
/// </summary>
/// <param name="net">RBF network.</param>
/// <param name="trainingData"></param>
/// <param name="specieNames"></param>
public void QueryEquilateral(GreedyRandom gr, Network net, List <Record> trainingData, Dictionary <string, int> specieNames)
{
// invert the specie list
Dictionary <int, string> invSpecies = new Dictionary <int, string>();
foreach (string key in specieNames.Keys)
{
int value = specieNames[key];
invSpecies[value] = key;
}
Equilateral eq = new Equilateral(specieNames.Count); // create encoding matrix for specie names
// for each training record
foreach (Record rec in trainingData)
{
double[] output = net.ComputeRegression(rec.Input); // run the record through the RBF network
int idealIndex = eq.Decode(rec.Ideals); // find the ideal specie name for the record
int actualIndex = eq.Decode(output); // find the calculated specie name for the record
Console.WriteLine("Guess: " + invSpecies[actualIndex]
+ ", Ideal: " + invSpecies[idealIndex]);
}
Console.WriteLine("Final error: " + gr.LastError);
}
public void Run()
{
// get iris file from resource stream
Assembly assembly = Assembly.GetExecutingAssembly();
var f = assembly.GetManifestResourceStream("RBFNetwork.Resources.iris.csv");
StreamReader sr = new StreamReader(f);
// load all records into new dataset
DataSet ds = DataSet.Load(sr);
sr.Close();
// normalize the data for columns
ds.Normalize(0); // sepal len
ds.Normalize(1); // sepal wid
ds.Normalize(2); // petal len
ds.Normalize(3); // petal wid
// get all species names and assign them an index
Dictionary <string, int> specieNames = ds.EncodeEquilateral(4);
// get a list of records with data and encoded class name
List <Record> trainingData = ds.ExtractSupervised(0, 4, 4, 2);
Network net = new Network(4, 4, 2); // new RBF network
Scorer score = new Scorer(trainingData); // new scorer
GreedyRandom gr = new GreedyRandom(net, score); // new greedy random training algorithm
Iterate(gr, 100000, 0.01); // iterate through the greedy random algorithm
QueryEquilateral(gr, net, trainingData, specieNames); //
}
/// <summary>
/// Iterate through a greedy random algorithm a certain number of times.
/// Tries to minimize the score.
/// </summary>
/// <param name="gr">Algorithm to iterate through.</param>
/// <param name="numIterations">Number of times to iterate.</param>
/// <param name="minScore">Score to attempt to reach.</param>
public void Iterate(GreedyRandom gr, int numIterations, double minScore)
{
int iterationNumber = 0; // number of iterations
bool done = false; // is the algorithm done?
// while not done...
do
{
iterationNumber++; // increase number of iterations
gr.Iteration(); // run an iteration
// if iteration reaches limit or score reaches min score
if (iterationNumber >= numIterations || gr.LastError < minScore)
{
done = true; // set done = true
}
// write out iteration # and score
Console.WriteLine("Iteration #" + iterationNumber + ", Score=" + gr.LastError + " (Minimize)");
} while(!done);
}