Пример #1
0
 public void  Add(InstrumentStatsByDepth p)
 {
     binId                   = p.binId;
     binDepth                = p.binDepth;
     scanLines              += p.scanLines;
     volumeSampled          += p.volumeSampled;
     temperatureMean        += p.temperatureMean;
     salinityMean           += p.salinityMean;
     densityMean            += p.densityMean;
     fluorescenceMean       += p.fluorescenceMean;
     fluorescenceSensorMean += p.fluorescenceSensorMean;
     oxygenMean             += p.oxygenMean;
     depthMean              += p.depthMean;
     transmisivityMean      += p.transmisivityMean;
     turbidityMean          += p.turbidityMean;
     cdomFluorescenceMean   += p.cdomFluorescenceMean;
     ++count;
 }
Пример #2
0
        } /* PrintTabDelDistributionMatrix */

        public void  PrintByClassCollumns(System.IO.StreamWriter o,
                                          List <uint> scanLinesPerMeterDepth,
                                          List <InstrumentStatsByDepth> volumePerMeterDepth,
                                          bool printDensity,                                  /**< Indicates to print density rather than counts. */
                                          PicesClassList summarizeClasses                     /**< List of classes that we need to print summary columns for. */
                                          )

        {
            PicesClassList classes = BuildMLClassList();
            int            cIDX;

            // Find the first and last buckets with activity

            int firstBucket = -1;
            int lastBucket  = 0;

            for (int bucketIDX = 0; bucketIDX < bucketCount; bucketIDX++)
            {
                int bucketTotal = 0;
                for (cIDX = 0; cIDX < classes.Count; cIDX++)
                {
                    PicesClass  mlClass     = classes[cIDX];
                    ClassTotals classTotals = totals.LookUp(mlClass.Name);
                    bucketTotal += classTotals.BucketCount(bucketIDX);
                }

                if (bucketTotal > 0)
                {
                    if (firstBucket < 0)
                    {
                        firstBucket = bucketIDX;
                    }
                    lastBucket = bucketIDX;
                }
            }

            if (firstBucket < 0)
            {
                o.WriteLine();
                o.WriteLine();
                o.WriteLine("SizeDistribution::PrintByClassCollumns     *** There is no SizeDistribution Data ***");
                o.WriteLine();
                return;
            }

            int[] finalTotals   = new int[classes.Count];
            int[] summaryTotals = null;
            for (int zed = 0; zed < classes.Count; zed++)
            {
                finalTotals[zed] = 0;
            }
            if (summarizeClasses != null)
            {
                summaryTotals = new int[summarizeClasses.Count];
                for (int zed = 0; zed < summaryTotals.Length; ++zed)
                {
                    summaryTotals[zed] = 0;
                }
            }

            int grandTotal = 0;

            String[] headLines = classes.ExtractThreeTitleLines();

            String[] summaryHeadLines = null;
            if (summarizeClasses == null)
            {
                summaryHeadLines    = new String[3];
                summaryHeadLines[0] = "";
                summaryHeadLines[1] = "";
                summaryHeadLines[2] = "";
            }
            else
            {
                String[] temp = summarizeClasses.ExtractTwoTitleLines();

                summaryHeadLines    = new String[3];
                summaryHeadLines[2] = temp[1];
                summaryHeadLines[1] = temp[0];
                summaryHeadLines[0] = "";
                for (int x = 0; x < summarizeClasses.Count; ++x)
                {
                    if (x > 0)
                    {
                        summaryHeadLines[0] += "\t";
                    }
                    summaryHeadLines[0] += "Summary";
                }
            }

            String s1 = "Abundance by Class";

            if (printDensity)
            {
                s1 = "Abundance/m-3";
            }

            String temperatureUOM      = PicesInstrumentData.TemperatureUnit;
            String fluorescenceUOM     = PicesInstrumentData.FluorescenceUnit;
            String densityUOM          = PicesInstrumentData.DensityUnit;
            String oxygenUOM           = PicesInstrumentData.OxygenUnit;
            String salinityUOM         = PicesInstrumentData.SalinityUnit;
            String transmisivityUMO    = PicesInstrumentData.TransmisivityUnit;
            String turbidityUMO        = PicesInstrumentData.TurbidityUnit;
            String cdomFluorescenceUMO = PicesInstrumentData.CdomFluorescenceUnit;

            //   [O2 (ml/L) * 44.64]/1.027 = O2 umol/kg

            o.WriteLine("" + "\t" + "" + "\t" + "" + "\t" + s1);
            o.WriteLine("" + "\t" + "" + "\t" + "Volume" + "\t" + headLines[0] + "\t" + "" + "\t" + "" + "\t" + "" + "\t" + summaryHeadLines[0] + "\t" + "" + "\t" + s1);
            o.WriteLine("" + "\t" + "Scan" + "\t" + "filtered" + "\t" + headLines[1] + "\t" + "" + "\t" + "All" + "\t" + "" + "\t" + summaryHeadLines[1] + "\t" + "" + "\t" + "Temperature" + "\t" + "Salinity" + "\t" + "Density" + "\t" + "Fluorescence" + "\t" + "FluorescenceSensor" + "\t" + "Oxygen" + "\t" + "Oxygen" + "\t" + "Transitivity" + "\t" + "Turbidity" + "\t" + "CdomFluorescence");
            o.WriteLine("Depth(m)" + "\t" + "Lines" + "\t" + "m-3" + "\t" + headLines[2] + "\t" + "" + "\t" + "Classes" + "\t" + "" + "\t" + summaryHeadLines[2] + "\t" + "" + "\t" + temperatureUOM + "\t" + salinityUOM + "\t" + densityUOM + "\t" + fluorescenceUOM + "\t" + "Volts" + "\t" + oxygenUOM + "\t" + "umol/kg" + "\t" + transmisivityUMO + "\t" + turbidityUMO + "\t" + cdomFluorescenceUMO);

            ulong  totalScanLines = 0;
            double totalVolume    = 0.0f;

            int imageSize = firstBucket * bucketSize;

            for (int bucketIDX = firstBucket; bucketIDX <= lastBucket; bucketIDX++)
            {
                int nextImageSize = imageSize + bucketSize;

                ulong scanLinesDepthForThisBucket = 0;
                if (scanLinesPerMeterDepth != null)
                {
                    for (int x = imageSize; x < Math.Min(nextImageSize, scanLinesPerMeterDepth.Count); x++)
                    {
                        scanLinesDepthForThisBucket += scanLinesPerMeterDepth[x];
                    }
                }

                InstrumentStatsByDepth totalThisBucketIdx = new InstrumentStatsByDepth(bucketIDX);
                double volumeDepthForThisBucket           = 0.0;
                if (volumePerMeterDepth != null)
                {
                    if (bucketIDX < volumePerMeterDepth.Count)
                    {
                        totalThisBucketIdx.Add(volumePerMeterDepth[bucketIDX]);
                    }
                    for (int x = imageSize; x < Math.Min(nextImageSize, volumePerMeterDepth.Count); x++)
                    {
                        if (x < volumePerMeterDepth.Count)
                        {
                            volumeDepthForThisBucket += volumePerMeterDepth[x].volumeSampled;
                        }
                    }
                }
                totalThisBucketIdx.ComputeMean();

                o.Write(imageSize.ToString() + "\t" +
                        scanLinesDepthForThisBucket.ToString() + "\t" +
                        volumeDepthForThisBucket.ToString("##,##0.000")
                        );

                totalScanLines += scanLinesDepthForThisBucket;
                totalVolume    += volumeDepthForThisBucket;

                int bucketTotal = 0;

                int intIDX = 0;
                for (cIDX = 0; cIDX < classes.Count; cIDX++)
                {
                    PicesClass  mlClass     = classes[cIDX];
                    ClassTotals classTotals = totals.LookUp(mlClass.Name);

                    int    qtyThisBucket     = classTotals.BucketCount(bucketIDX);
                    double densityThisBucket = 0.0;
                    if (volumeDepthForThisBucket != 0.0)
                    {
                        densityThisBucket = classTotals.BucketCount(bucketIDX) / volumeDepthForThisBucket;
                    }

                    if (printDensity)
                    {
                        o.Write("\t" + densityThisBucket.ToString("#####0.000"));
                    }
                    else
                    {
                        o.Write("\t" + qtyThisBucket.ToString());
                    }

                    bucketTotal         += qtyThisBucket;
                    finalTotals[intIDX] += qtyThisBucket;
                    grandTotal          += qtyThisBucket;

                    intIDX++;
                }

                o.Write("\t" + "");

                {
                    if (printDensity)
                    {
                        double densityThisBucket = 0.0;
                        if (volumeDepthForThisBucket != 0.0)
                        {
                            densityThisBucket = bucketTotal / volumeDepthForThisBucket;
                        }
                        o.Write("\t" + densityThisBucket.ToString("#####0.000"));
                    }
                    else
                    {
                        o.Write("\t" + bucketTotal);
                    }
                }

                o.Write("\t" + "");

                if ((summarizeClasses != null) && (summarizeClasses.Count > 0))
                {
                    int zed = 0;
                    foreach (PicesClass pc in  summarizeClasses)
                    {
                        int qtyThisBucket = SumUpFamilyOfClassesForBucket(pc, bucketIDX);
                        summaryTotals[zed] = qtyThisBucket;
                        if (printDensity)
                        {
                            double densityThisBucket = 0.0;
                            if (volumeDepthForThisBucket != 0.0)
                            {
                                densityThisBucket = qtyThisBucket / volumeDepthForThisBucket;
                            }
                            o.Write("\t" + densityThisBucket.ToString("#####0.000"));
                        }
                        else
                        {
                            o.Write("\t" + qtyThisBucket.ToString());
                        }
                        ++zed;
                    }
                }

                o.Write("\t" + "");

                if (totalThisBucketIdx != null)
                {
                    o.Write("\t" + totalThisBucketIdx.temperatureMean.ToString("###0.000") +
                            "\t" + totalThisBucketIdx.salinityMean.ToString("###0.000") +
                            "\t" + totalThisBucketIdx.densityMean.ToString("###0.000") +
                            "\t" + totalThisBucketIdx.fluorescenceMean.ToString("###0.000") +
                            "\t" + totalThisBucketIdx.fluorescenceSensorMean.ToString("###0.000") +
                            "\t" + totalThisBucketIdx.oxygenMean.ToString("###0.000") +
                            "\t" + totalThisBucketIdx.Oxygen_molPerKg.ToString("###0.000") +
                            "\t" + totalThisBucketIdx.transmisivityMean.ToString("###0.000") +
                            "\t" + totalThisBucketIdx.turbidityMean.ToString("###0.000") +
                            "\t" + totalThisBucketIdx.cdomFluorescenceMean.ToString("###0.000")
                            );
                }

                imageSize = nextImageSize;
                o.WriteLine();
            }

            {
                o.WriteLine();
                o.Write("Final Totals" + "\t" + totalScanLines + "\t" + totalVolume);
                for (uint x = 0; x < classes.Count; x++)
                {
                    double density = 0;
                    if (totalVolume != 0.0)
                    {
                        density = finalTotals[x] / totalVolume;
                    }

                    if (printDensity)
                    {
                        o.Write("\t" + "");
                    }
                    else
                    {
                        o.Write("\t" + finalTotals[x]);
                    }
                }

                o.Write("\t");
                double grandTotalDensity = 0.0;
                if (totalVolume != 0.0)
                {
                    grandTotalDensity = grandTotal / totalVolume;
                }

                if (printDensity)
                {
                    o.Write("\t" + grandTotalDensity.ToString("#####0.000"));
                }
                else
                {
                    o.Write("\t" + grandTotal.ToString());
                }

                o.Write("\t");

                if (summaryTotals != null)
                {
                    for (uint x = 0; x < summaryTotals.Length; ++x)
                    {
                        o.Write("\t");
                        if (printDensity)
                        {
                            if (totalVolume != 0.0)
                            {
                                o.Write((summaryTotals[x] / totalVolume).ToString("#####0.000"));
                            }
                            else
                            {
                                o.Write(0.0);
                            }
                        }
                        else
                        {
                            o.Write(summaryTotals[x]);
                        }
                    }
                }

                o.WriteLine();
            }

            classes = null;
        } /* ReportByClassCollumns */