/// Read in EVERY position in the layout from a CSV list of TypeId, GroupNum
public void InitFromCSVStringAllPositions(string csv, int width, int height)
{
LayoutDimensions = new LayoutDimensions(width, height);
singleLayoutLight = new SingleLayoutLight(csv);
if (singleLayoutLight.NumPositions != width * height)
{
throw new InvalidProgramException();
}
// Infer Sample types if they have not already been setup
if (sampleTypes.Count == 0)
{
var usedTypes = (from LayoutPos pos in singleLayoutLight.LayoutPositions
where pos.TypeId != 1 // Ignore unused type in this list
select pos.TypeId).Distinct();
// Always add unused
sampleTypes.Add(new SampleType() { Name = "Unused", Colour = "White", Id = 1 });
foreach (var type in usedTypes)
{
SampleType sampleType;
switch (type)
{
case 2:
sampleType = new SampleType() { Name = "Standard", Colour = "Red" };
break;
case 3:
sampleType = new SampleType() { Name = "Blank", Colour = "Yellow" };
break;
case 4:
sampleType = new SampleType() { Name = "Control", Colour = "Aqua" };
break;
case 5:
sampleType = new SampleType() { Name = "Unknown", Colour = "Lime" };
break;
case 7:
sampleType = new SampleType() { Name = "Pos Control", Colour = "#7dffff" };
break;
case 8:
sampleType = new SampleType() { Name = "Neg Control", Colour = "#fefccf" };
break;
case 24:
sampleType = new SampleType() { Name = "B0", Colour = "#FFD080" };
break;
case 25:
sampleType = new SampleType() { Name = "NSB", Colour = "#FF80FF" };
break;
case 26:
sampleType = new SampleType() { Name = "TA", Colour = "#9E8010" };
break;
case 109:
sampleType = new SampleType() { Name = "Unknown 1:1", Colour = "#408040" };
break;
case 110:
sampleType = new SampleType() { Name = "Unknown 1:10", Colour = "#00c000" };
break;
case 111:
sampleType = new SampleType() { Name = "Unknown 1:200", Colour = "#c0ffc0" };
break;
default:
sampleType = new SampleType() { Name = typeNotSupported, Colour = "Black" };
break;
}
sampleType.Id = type;
sampleTypes.Add(sampleType);
}
}
}
// Creates a SingleLayoutEditor from a SingleLayoutLight object
// This is used when data is received from the server, it is converted to a form more suitable
// for working with the PlateControl.
// The main differences are that:
// 1. A SingleLayoutLight only lists used wells, whereas a SingleLayoutEditor has an entry for every position
public SingleLayoutEditor CreateSingleLayoutEditor(SingleLayoutLight singleLayoutLight, int width, int height, FillSettingsModel fillSettings)
{
SingleLayoutEditor singleLayoutEditor = new SingleLayoutEditor(width, height);
foreach (LayoutPos layoutPos in singleLayoutLight.LayoutPositions)
{
int position = layoutPos.Id;
singleLayoutEditor.CheckPositionInRangeOneBased(position);
LayoutPosEditor layoutPosEditor = singleLayoutEditor[position - 1];
ModifyLayoutPosEditorForPosition(layoutPos, ref layoutPosEditor, fillSettings);
}
return singleLayoutEditor;
}
public void OnUpdateUserLayout(SingleLayoutLight userLayout, string flaggedPositions)
{
// The UserLayout has changed, therefore convert this to a SingleLayoutEditor and update the EditorState
var singleLayoutEditor = _editorStateHelper.CreateSingleLayoutEditor(userLayout,
_layoutEditorPopulation.Width,
_layoutEditorPopulation.Height,
FillSettings);
// Apply flags to singleLayoutEditor
if (ControlSettings.IsFlagMode)
singleLayoutEditor.InitFlaggedPositionsFromCsv(flaggedPositions);
FillSettings.MaxGroupNum = singleLayoutEditor.NumPositions;
// Update the editor state
_editorStateHelper.CurrentState = singleLayoutEditor;
}
