public void AddIndex(int lane, SampleIndex index)
{
HashSet<SampleIndex> laneIndexes;
if (!_laneIndexes.TryGetValue(lane, out laneIndexes))
{
laneIndexes = new HashSet<SampleIndex>();
_laneIndexes[lane] = laneIndexes;
}
_laneIndexes[lane].Add(index);
}
public int MismatchCount(SampleIndex otherIndex)
{
return
MismatchCount(Index1Sequence, otherIndex.Index1Sequence) +
MismatchCount(Index2Sequence, otherIndex.Index2Sequence);
}
public bool ContainsIndex(int lane, SampleIndex index)
{
return ContainsLane(lane) && _laneIndexes[lane].Contains(index);
}
