public void ExtractESDATDataFromNoHeaderFileTest()
{
var mockDefaultValueProvider = new Mock<IWQDefaultValueProvider>();
mockDefaultValueProvider.Setup(x => x.OrganizationNameSampleCollection).Returns("Default organization name from provider");
var chemistryFileToImport = CreateCSVDataToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "ChemistryFileExample.csv"));
var sampleFileToImport = CreateCSVDataToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "SampleFileExample.csv"));
var testESDATDataToImport = new ESDATDataToImport(null, sampleFileToImport, chemistryFileToImport);
var simpleValueAssginer = new SimpleValueAssigner();
var sampleDataImporter = ESDATTestHelper.BuildSampleDataFileImporter();
var sampleFileChildObjectExtractConfiguration = new SampleFileChildObjectExtractConfiguration(sampleDataImporter, "SampleFileData", simpleValueAssginer);
var chemistryDataImporter = ESDATTestHelper.BuildChemistryFileImporter();
var chemistryFileChildObjectExtractConfiguration = new ChemistryFileChildObjectExtractConfiguration(chemistryDataImporter, "ChemistryData", simpleValueAssginer);
var testESDATDataImporter = new ESDATDataImporter(ResultLevel.ERROR, mockDefaultValueProvider.Object);
AddXMLExtractConfigurationsToImporter(testESDATDataImporter);
testESDATDataImporter.AddExtractConfiguration(sampleFileChildObjectExtractConfiguration);
testESDATDataImporter.AddExtractConfiguration(chemistryFileChildObjectExtractConfiguration);
var extractResult = testESDATDataImporter.Extract<ESDATModel>(testESDATDataToImport);
Assert.NotNull(extractResult);
var entity = extractResult.ExtractedEntities.Cast<ESDATModel>().SingleOrDefault();
Assert.NotNull(entity);
Assert.AreEqual("Default organization name from provider", entity.LabName);
Assert.AreEqual(3, entity.SampleFileData.Count());
Assert.AreEqual(9, entity.ChemistryData.Count());
}
public static IDataImporter BuildESDATDataImporter(IWQDefaultValueProvider wqDefaultValueProvider)
{
var simpleValueAssginer = new SimpleValueAssigner();
var sampleDataImporter = BuildSampleDataFileImporter();
var sampleFileChildObjectExtractConfiguration = new SampleFileChildObjectExtractConfiguration(sampleDataImporter, "SampleFileData", simpleValueAssginer);
var chemistryDataImporter = BuildChemistryFileImporter();
var chemistryFileChildObjectExtractConfiguration = new ChemistryFileChildObjectExtractConfiguration(chemistryDataImporter, "ChemistryData", simpleValueAssginer);
var ESDATDataImporter = new ESDATDataImporter(ResultLevel.ERROR, wqDefaultValueProvider);
AddXMLExtractConfigurationsToImporter(ESDATDataImporter);
ESDATDataImporter.AddExtractConfiguration(sampleFileChildObjectExtractConfiguration);
ESDATDataImporter.AddExtractConfiguration(chemistryFileChildObjectExtractConfiguration);
return ESDATDataImporter;
}
public void ChemistryFilePropertyTest()
{
var path = Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "ChemistryFileExample.csv");
var dataSource = new WindowsFileSystem(path);
var dataFromFileSystem = dataSource.FetchData();
var dataToImport = new CSVDataToImport(dataFromFileSystem);
var simpleValueAssginer = new SimpleValueAssigner();
var chemistryImporter = ESDATTestHelper.BuildChemistryFileImporter();
var childObjectExtractConfiguration = new ChemistryFileChildObjectExtractConfiguration(chemistryImporter, "ChemistryData", simpleValueAssginer);
Assert.AreEqual(typeof(ChemistryFileData), childObjectExtractConfiguration.ChildObjectType);
var testESDATModel = new ESDATModel();
var extractResult = childObjectExtractConfiguration.ExtractData(testESDATModel, dataToImport);
Assert.NotNull(extractResult);
Assert.AreEqual(9, testESDATModel.ChemistryData.Count());
}
public static IExtractConfiguration CreateChemistryFileDataExtractConfiguration()
{
var path = Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "ChemistryFileExample.csv");
var dataSource = new WindowsFileSystem(path);
var dataFromFileSystem = dataSource.FetchData();
var dataToImport = new CSVDataToImport(dataFromFileSystem);
var simpleValueAssginer = new SimpleValueAssigner();
var chemistryImporter = ESDATTestHelper.BuildChemistryFileImporter();
var childObjectExtractConfiguration = new ChemistryFileChildObjectExtractConfiguration(chemistryImporter, "ChemistryData", simpleValueAssginer);
return childObjectExtractConfiguration;
}