private void setElement(string elementName, bool enabled)
{
if (selectedMolecule == null || selectedMolecule.RenderSettings.EnabledElements == null)
{
return;
}
if (selectedMolecule.RenderSettings.EnabledElements.Contains(elementName))
{
if (!enabled)
{
selectedMolecule.RenderSettings.EnabledElements.Remove(elementName);
}
}
else
{
if (enabled)
{
selectedMolecule.RenderSettings.EnabledElements.Add(elementName);
}
}
if (selectedMolecule.Hidden)
{
selectedMolecule.PendingRerender = true;
}
else
{
UserInterfaceEvents.RaiseMoleculeRenderSettingsUpdated(selectedMolecule.ID, selectedMolecule.RenderSettings, selectedMolecule.CurrentTrajectoryFrameNumber);
}
}
public void OnStopButton()
{
if (validMoleculeSelected())
{
animating = false;
MoleculeSettings molecule = molecules.GetSelected();
molecule.CurrentTrajectoryFrameNumber = null;
UserInterfaceEvents.RaiseMoleculeRenderSettingsUpdated(molecule.ID, molecule.RenderSettings, molecule.CurrentTrajectoryFrameNumber);
UpdateFrameNumberInfo();
}
}
private void updateMoleculeRender()
{
if (selectedMolecule.Hidden)
{
selectedMolecule.PendingRerender = true;
}
else
{
UserInterfaceEvents.RaiseMoleculeRenderSettingsUpdated(selectedMolecule.ID, selectedMolecule.RenderSettings, selectedMolecule.CurrentTrajectoryFrameNumber);
}
}
private void loadRenderSettings(int moleculeID, MoleculeRenderSettings settings)
{
MoleculeSettings molecule = molecules.Get(moleculeID);
if (molecule == null)
{
return;
}
molecule.RenderSettings = (MoleculeRenderSettings)settings;
UserInterfaceEvents.RaiseMoleculeRenderSettingsUpdated(molecule.ID, molecule.RenderSettings, molecule.CurrentTrajectoryFrameNumber);
}
private void stepBackwardAnimation()
{
MoleculeSettings molecule = molecules.GetSelected();
molecule.CurrentTrajectoryFrameNumber--;
if (molecule.CurrentTrajectoryFrameNumber == null || molecule.CurrentTrajectoryFrameNumber < 0)
{
molecule.CurrentTrajectoryFrameNumber = molecule.TrajectoryFrameCount - 1;
}
UserInterfaceEvents.RaiseMoleculeRenderSettingsUpdated(molecule.ID, molecule.RenderSettings, molecule.CurrentTrajectoryFrameNumber);
UpdateFrameNumberInfo();
}
public void OnEndEditFrameInput()
{
Debug.Log("End frame input");
try {
int frameNumber = int.Parse(this.frameNumber.text);
MoleculeSettings molecule = molecules.GetSelected();
frameNumber = Mathf.Clamp(frameNumber, 1, molecule.TrajectoryFrameCount);
this.frameNumber.text = frameNumber.ToString();
if (frameNumber != lastFrameNumber)
{
Debug.Log("New frameNumber: " + frameNumber);
molecule.CurrentTrajectoryFrameNumber = frameNumber - 1;
UserInterfaceEvents.RaiseMoleculeRenderSettingsUpdated(molecule.ID, molecule.RenderSettings, molecule.CurrentTrajectoryFrameNumber);
}
}
catch (Exception) {
frameNumber.text = lastFrameNumber.ToString();
}
}
public void OnShowHideMoleculeButton()
{
MoleculeSettings molecule = molecules.GetSelected();
if (molecule == null)
{
return;
}
if (hiddenMolecules.Contains(molecule.ID))
{
molecule.Hidden = false;
UserInterfaceEvents.RaiseShowMolecule(molecule.ID);
if (molecule.PendingRerender)
{
UserInterfaceEvents.RaiseMoleculeRenderSettingsUpdated(molecule.ID, molecule.RenderSettings, molecule.CurrentTrajectoryFrameNumber);
}
UserInterfaceEvents.RaiseMoleculeSelected(molecule.ID, true);
hiddenMolecules.Remove(molecule.ID);
}
else
{
molecule.Hidden = true;
trajectoryControls.StopAnimation();
UserInterfaceEvents.RaiseHideMolecule(molecule.ID);
hiddenMolecules.Add(molecule.ID);
if (interactionsPanel.MonitoringEnabled)
{
interactionsPanel.StopInteractions();
console.ShowError("Stopped monitoring molecular interactions, hiding molecule");
}
UserInterfaceEvents.RaiseMoleculeSelected(molecule.ID, false);
}
updateSelectedMoleculeInterfaceSettings();
}
public void DecreaseBondScale()
{
selectedMolecule.RenderSettings.BondScale -= scaleIncrementAmount;
BondScale.text = selectedMolecule.RenderSettings.BondScale.ToString("F1");
UserInterfaceEvents.RaiseMoleculeRenderSettingsUpdated(selectedMolecule.ID, selectedMolecule.RenderSettings, selectedMolecule.CurrentTrajectoryFrameNumber);
}
public void SaveSettings()
{
if (selectedMolecule == null)
{
return;
}
bool visualisationUpdateRequired = false;
// primary structure options
if (selectedMolecule.RenderSettings.ShowPrimaryStructure != EnablePrimaryStructureToggle.isOn)
{
selectedMolecule.RenderSettings.ShowPrimaryStructure = EnablePrimaryStructureToggle.isOn;
visualisationUpdateRequired = true;
}
if (selectedMolecule.RenderSettings.ShowAtoms != ShowAtomsToggle.isOn)
{
selectedMolecule.RenderSettings.ShowAtoms = ShowAtomsToggle.isOn;
visualisationUpdateRequired = true;
}
if (selectedMolecule.RenderSettings.ShowBonds != ShowBondsToggle.isOn)
{
selectedMolecule.RenderSettings.ShowBonds = ShowBondsToggle.isOn;
visualisationUpdateRequired = true;
}
if (selectedMolecule.RenderSettings.ShowStandardResidues != ShowStandardResiduesToggle.isOn)
{
selectedMolecule.RenderSettings.ShowStandardResidues = ShowStandardResiduesToggle.isOn;
visualisationUpdateRequired = true;
}
if (selectedMolecule.RenderSettings.ShowNonStandardResidues != ShowNonStandardResiduesToggle.isOn)
{
selectedMolecule.RenderSettings.ShowNonStandardResidues = ShowNonStandardResiduesToggle.isOn;
visualisationUpdateRequired = true;
}
if (selectedMolecule.RenderSettings.ShowMainChains != ShowMainChainsToggle.isOn)
{
selectedMolecule.RenderSettings.ShowMainChains = ShowMainChainsToggle.isOn;
visualisationUpdateRequired = true;
}
// representation options
if (ShowCPKToggle.isOn && selectedMolecule.RenderSettings.Representation != MolecularRepresentation.CPK)
{
selectedMolecule.RenderSettings.Representation = MolecularRepresentation.CPK;
visualisationUpdateRequired = true;
}
else if (ShowVDWToggle.isOn && selectedMolecule.RenderSettings.Representation != MolecularRepresentation.VDW)
{
selectedMolecule.RenderSettings.Representation = MolecularRepresentation.VDW;
visualisationUpdateRequired = true;
}
// secondary structure options
if (selectedMolecule.RenderSettings.ShowSecondaryStructure != EnableSecondaryStructureToggle.isOn)
{
selectedMolecule.RenderSettings.ShowSecondaryStructure = EnableSecondaryStructureToggle.isOn;
visualisationUpdateRequired = true;
}
if (selectedMolecule.RenderSettings.ShowHelices != ShowHelicesToggle.isOn)
{
selectedMolecule.RenderSettings.ShowHelices = ShowHelicesToggle.isOn;
visualisationUpdateRequired = true;
}
if (selectedMolecule.RenderSettings.ShowSheets != ShowSheetsToggle.isOn)
{
selectedMolecule.RenderSettings.ShowSheets = ShowSheetsToggle.isOn;
visualisationUpdateRequired = true;
}
if (selectedMolecule.RenderSettings.ShowTurns != ShowTurnsToggle.isOn)
{
selectedMolecule.RenderSettings.ShowTurns = ShowTurnsToggle.isOn;
visualisationUpdateRequired = true;
}
if (selectedMolecule.RenderSettings.SmoothNodes != SmoothNodesToggle.isOn)
{
selectedMolecule.RenderSettings.SmoothNodes = SmoothNodesToggle.isOn;
visualisationUpdateRequired = true;
}
// other options
if (selectedMolecule.RenderSettings.ShowSimulationBox != EnableSimlationBoxToggle.isOn)
{
selectedMolecule.RenderSettings.ShowSimulationBox = EnableSimlationBoxToggle.isOn;
visualisationUpdateRequired = true;
}
if (selectedMolecule.RenderSettings.CalculateBoxEveryFrame != CalculateBoxEveryFrameToggle.isOn)
{
selectedMolecule.RenderSettings.CalculateBoxEveryFrame = CalculateBoxEveryFrameToggle.isOn;
visualisationUpdateRequired = true;
}
// recreate structures if necessary
if (visualisationUpdateRequired)
{
if (selectedMolecule.Hidden)
{
selectedMolecule.PendingRerender = true;
}
else
{
UserInterfaceEvents.RaiseMoleculeRenderSettingsUpdated(selectedMolecule.ID, selectedMolecule.RenderSettings, selectedMolecule.CurrentTrajectoryFrameNumber);
}
}
}
