DoIt() публичный Метод

Performs fragment binning for the chromosome.
public DoIt ( ) : void
Результат void
Документация по классу FragmentBinner.BinTask
Пример #1
0
 public void TestBinSingleEndBam()
 {
     string assemblyFolder = Isas.Shared.Utilities.GetAssemblyFolder(typeof(TestCanvasBin));
     string dataFolder = Path.Combine(assemblyFolder, "Data");
     string bedPath = Path.Combine(dataFolder, "bins_chrM.bed");
     string bamPath = Path.Combine(dataFolder, "single-end.bam");
     Dictionary<string, List<GenomicBin>> bins = CanvasCommon.Utilities.LoadBedFile(bedPath, gcIndex: 3);
     string chrom = "chrM";
     FragmentBinner.BinTask binTask = new FragmentBinner.BinTask(null, chrom, bamPath, bins[chrom]);
     bool exceptionCaught = false;
     try
     {
         binTask.DoIt();
     }
     catch (ApplicationException e)
     {
         if (e.Message.Contains("No paired alignments found"))
             exceptionCaught = true;
     }
     Assert.IsTrue(exceptionCaught);
 }