public static List<aim4_dotnet.ImagingPhysicalEntity> ToSelectedAnatomicEntitiesList(AimTemplateTreeAnatomicEntityNode node)
{
var selectedImagingPhysicalEntities = new List<aim4_dotnet.ImagingPhysicalEntity>();
bool isValid = node.Valid;
foreach (var term in node.SelectedAllowedTerms)
{
var imagingPhysicalEntity = new aim4_dotnet.ImagingPhysicalEntity
{
UniqueIdentifier = NewUid,
TypeCode = ToNativeCodeList(term),
QuestionTypeCode = ToNativeCodeList(node.QuestionType),
QuestionIndex = node.ItemNumber,
Label = node.Label,
IsPresent = true
};
if (node.HasConfidence)
imagingPhysicalEntity.AnnotatorConfidence = null; // node.ConfidenceValue;
//node
var selectedImagingPhysicalEntityCharacteristics = SelectedAnatomicEntityCharacteristicsDictionary(node);
// Sort characteristics first according to their ItemNumber
List<int> anatomicEntityCharacteristicIndices =
CollectionUtils.Sort(selectedImagingPhysicalEntityCharacteristics.Keys, (i1, i2) => i1.CompareTo(i2));
foreach (int characteristicIndex in anatomicEntityCharacteristicIndices)
{
// Find definition of the selected characteristic in the component
int index = characteristicIndex;
AimTemplateTreeAnatomicEntityCharacteristicNode templateAnatomicEntityCharacteristic =
CollectionUtils.SelectFirst(node.AnatomicEntityCharacteristicTreeNodes,
item => item.ItemNumber == index);
isValid = templateAnatomicEntityCharacteristic != null &&
selectedImagingPhysicalEntityCharacteristics[characteristicIndex].Count >=
Math.Min(templateAnatomicEntityCharacteristic.CharacteristicQuantificationAllowedTerms.Count, templateAnatomicEntityCharacteristic.MinCardinality) &&
selectedImagingPhysicalEntityCharacteristics[characteristicIndex].Count <= templateAnatomicEntityCharacteristic.MaxCardinality;
if (!isValid)
break;
// Put all Anatomic Entity Characteristics into a single collection
imagingPhysicalEntity.ImagingPhysicalEntityCharacteristicCollection =
CollectionUtils.Concat<aim4_dotnet.ImagingPhysicalEntityCharacteristic>(
imagingPhysicalEntity.ImagingPhysicalEntityCharacteristicCollection ?? new List<aim4_dotnet.ImagingPhysicalEntityCharacteristic>(),
selectedImagingPhysicalEntityCharacteristics[characteristicIndex]
);
}
if (!isValid)
break;
selectedImagingPhysicalEntities.Add(imagingPhysicalEntity);
}
return selectedImagingPhysicalEntities;
}
public static Dictionary<int, List<aim4_dotnet.ImagingPhysicalEntityCharacteristic>> SelectedAnatomicEntityCharacteristicsDictionary(AimTemplateTreeAnatomicEntityNode anatomicEntity)
{
return anatomicEntity.SelectedAnatomicEntityCharacteristicTreeNodes.ToDictionary(aec => aec.ItemNumber,
aec => new List<aim4_dotnet.ImagingPhysicalEntityCharacteristic>(SelectedAnatomicEntityCharacteristics(aec)));
}
