public virtual void AddAnnotations(pwiz.MSGraph.MSGraphPane graphPane, Graphics g, pwiz.MSGraph.MSPointList pointList, ZedGraph.GraphObjList annotations)
{
PointMap points = new PointMap(Points);
foreach (IAnnotation annotation in annotationList)
{
annotation.Update(this, pointList, annotations);
}
}
/// <summary>
/// add precursor and non-matched annotations
/// </summary>
public override void AddAnnotations(pwiz.MSGraph.MSGraphPane graphPane, Graphics g, pwiz.MSGraph.MSPointList pointList, ZedGraph.GraphObjList annotations)
{
base.AddAnnotations(graphPane, g, pointList, annotations);
//using( Spectrum element = Element )
{
foreach (Precursor p in Element.precursors)
{
foreach (SelectedIon si in p.selectedIons)
{
double precursorMz = (double)si.cvParam(CVID.MS_selected_ion_m_z).value;
int precursorCharge = 0;
CVParam precursorChargeParam = si.cvParam(CVID.MS_charge_state);
if (precursorChargeParam.empty())
{
precursorChargeParam = si.cvParam(CVID.MS_possible_charge_state);
}
if (!precursorChargeParam.empty())
{
precursorCharge = (int)precursorChargeParam.value;
}
double stickLength = 0.1;
ZedGraph.LineObj stickOverlay = new ZedGraph.LineObj(precursorMz, 1, precursorMz, stickLength);
stickOverlay.Location.CoordinateFrame = ZedGraph.CoordType.XScaleYChartFraction;
stickOverlay.Line.Width = 3;
stickOverlay.Line.Style = System.Drawing.Drawing2D.DashStyle.Dot;
stickOverlay.Line.Color = Color.Green;
annotations.Add(stickOverlay);
// Create a text label from the X data value
string precursorLabel;
if (precursorCharge > 0)
{
precursorLabel = String.Format("{0}\n(+{1} precursor)", precursorMz.ToString("f3"), precursorCharge);
}
else
{
precursorLabel = String.Format("{0}\n(precursor of unknown charge)", precursorMz.ToString("f3"));
}
ZedGraph.TextObj text = new ZedGraph.TextObj(precursorLabel, precursorMz, stickLength,
ZedGraph.CoordType.XScaleYChartFraction, ZedGraph.AlignH.Center, ZedGraph.AlignV.Bottom);
text.ZOrder = ZedGraph.ZOrder.A_InFront;
text.FontSpec.FontColor = stickOverlay.Line.Color;
text.FontSpec.Border.IsVisible = false;
text.FontSpec.Fill.IsVisible = false;
//text.FontSpec.Fill = new Fill( Color.FromArgb( 100, Color.White ) );
text.FontSpec.Angle = 0;
annotations.Add(text);
}
}
}
}
/// <summary>
/// Required method for Designer support - do not modify
/// the contents of this method with the code editor.
/// </summary>
private void InitializeComponent()
{
this.components = new System.ComponentModel.Container();
pwiz.MSGraph.MSGraphPane msGraphPane1 = new pwiz.MSGraph.MSGraphPane();
System.ComponentModel.ComponentResourceManager resources = new System.ComponentModel.ComponentResourceManager( typeof( GraphForm ) );
this.msGraphControl = new pwiz.MSGraph.MSGraphControl();
this.SuspendLayout();
//
// msGraphControl
//
this.msGraphControl.Dock = System.Windows.Forms.DockStyle.Fill;
this.msGraphControl.EditButtons = System.Windows.Forms.MouseButtons.Left;
this.msGraphControl.EditModifierKeys = System.Windows.Forms.Keys.None;
msGraphPane1.BaseDimension = 8F;
msGraphPane1.IsAlignGrids = false;
msGraphPane1.IsBoundedRanges = false;
msGraphPane1.IsFontsScaled = true;
msGraphPane1.IsIgnoreInitial = false;
msGraphPane1.IsIgnoreMissing = false;
msGraphPane1.IsPenWidthScaled = false;
msGraphPane1.LineType = ZedGraph.LineType.Normal;
msGraphPane1.Tag = null;
msGraphPane1.TitleGap = 0.5F;
this.msGraphControl.GraphPane = msGraphPane1;
this.msGraphControl.IsEnableVZoom = false;
this.msGraphControl.Location = new System.Drawing.Point( 0, 0 );
this.msGraphControl.Name = "msGraphControl";
this.msGraphControl.PanButtons2 = System.Windows.Forms.MouseButtons.None;
this.msGraphControl.ScrollGrace = 0;
this.msGraphControl.ScrollMaxX = 0;
this.msGraphControl.ScrollMaxY = 0;
this.msGraphControl.ScrollMaxY2 = 0;
this.msGraphControl.ScrollMinX = 0;
this.msGraphControl.ScrollMinY = 0;
this.msGraphControl.ScrollMinY2 = 0;
this.msGraphControl.Size = new System.Drawing.Size( 464, 413 );
this.msGraphControl.TabIndex = 0;
//
// GraphForm
//
this.AutoScaleDimensions = new System.Drawing.SizeF( 6F, 13F );
this.AutoScaleMode = System.Windows.Forms.AutoScaleMode.Font;
this.AutoScroll = true;
this.ClientSize = new System.Drawing.Size( 464, 413 );
this.Controls.Add( this.msGraphControl );
this.MinimumSize = new System.Drawing.Size( 100, 50 );
this.Name = "GraphForm";
this.TabText = "GraphForm";
this.Text = "GraphForm";
this.ResizeBegin += new System.EventHandler( this.GraphForm_ResizeBegin );
this.ResizeEnd += new System.EventHandler( this.GraphForm_ResizeEnd );
this.ResumeLayout( false );
}
/// <summary>
/// Required method for Designer support - do not modify
/// the contents of this method with the code editor.
/// </summary>
private void InitializeComponent()
{
this.components = new System.ComponentModel.Container();
pwiz.MSGraph.MSGraphPane msGraphPane1 = new pwiz.MSGraph.MSGraphPane();
System.ComponentModel.ComponentResourceManager resources = new System.ComponentModel.ComponentResourceManager(typeof(GraphForm));
this.msGraphControl = new pwiz.MSGraph.MSGraphControl();
this.SuspendLayout();
//
// msGraphControl
//
this.msGraphControl.Dock = System.Windows.Forms.DockStyle.Fill;
this.msGraphControl.EditButtons = System.Windows.Forms.MouseButtons.Left;
this.msGraphControl.EditModifierKeys = System.Windows.Forms.Keys.None;
msGraphPane1.BaseDimension = 8F;
msGraphPane1.IsAlignGrids = false;
msGraphPane1.IsBoundedRanges = false;
msGraphPane1.IsFontsScaled = true;
msGraphPane1.IsIgnoreInitial = false;
msGraphPane1.IsIgnoreMissing = false;
msGraphPane1.IsPenWidthScaled = false;
msGraphPane1.LineType = ZedGraph.LineType.Normal;
msGraphPane1.Tag = null;
msGraphPane1.TitleGap = 0.5F;
this.msGraphControl.GraphPane = msGraphPane1;
this.msGraphControl.IsEnableVZoom = false;
this.msGraphControl.Location = new System.Drawing.Point(0, 0);
this.msGraphControl.Name = "msGraphControl";
this.msGraphControl.PanButtons2 = System.Windows.Forms.MouseButtons.None;
this.msGraphControl.ScrollGrace = 0;
this.msGraphControl.ScrollMaxX = 0;
this.msGraphControl.ScrollMaxY = 0;
this.msGraphControl.ScrollMaxY2 = 0;
this.msGraphControl.ScrollMinX = 0;
this.msGraphControl.ScrollMinY = 0;
this.msGraphControl.ScrollMinY2 = 0;
this.msGraphControl.Size = new System.Drawing.Size(464, 413);
this.msGraphControl.TabIndex = 0;
//
// GraphForm
//
this.AutoScaleDimensions = new System.Drawing.SizeF(6F, 13F);
this.AutoScaleMode = System.Windows.Forms.AutoScaleMode.Font;
this.AutoScroll = true;
this.ClientSize = new System.Drawing.Size(464, 413);
this.Controls.Add(this.msGraphControl);
this.MinimumSize = new System.Drawing.Size(100, 50);
this.Name = "GraphForm";
this.TabText = "GraphForm";
this.Text = "GraphForm";
this.ResizeBegin += new System.EventHandler(this.GraphForm_ResizeBegin);
this.ResizeEnd += new System.EventHandler(this.GraphForm_ResizeEnd);
this.ResumeLayout(false);
}
public override void AddAnnotations(pwiz.MSGraph.MSGraphPane graphPane, Graphics g, pwiz.MSGraph.MSPointList pointList, ZedGraph.GraphObjList annotations)
{
base.AddAnnotations(graphPane, g, pointList, annotations);
}
