public HttpResponseMessage UpdateValueSet(
[FromBody] FhirValueSet fhirValueSet,
[FromUri] int valueSetId,
[FromUri(Name = "_format")] string format = null)
{
ValueSetExporter exporter = new ValueSetExporter(this.tdb);
ValueSetImporter importer = new ValueSetImporter(this.tdb);
ValueSet originalValueSet = this.tdb.ValueSets.Single(y => y.Id == valueSetId);
ValueSet newValueSet = importer.Convert(fhirValueSet, valueSet: originalValueSet);
if (originalValueSet == null)
{
this.tdb.ValueSets.Add(newValueSet);
}
this.tdb.SaveChanges();
string location = string.Format("{0}://{1}/api/FHIR3/ValueSet/{2}",
this.Request.RequestUri.Scheme,
this.Request.RequestUri.Authority,
fhirValueSet.Id);
Dictionary <string, string> headers = new Dictionary <string, string>();
headers.Add("Location", location);
FhirValueSet updatedFhirValueSet = exporter.Convert(newValueSet);
return(Shared.GetResponseMessage(this.Request, format, updatedFhirValueSet, originalValueSet != null ? 200 : 201, headers));
}
public HttpResponseMessage CreateValueSet(
[FromBody] FhirValueSet fhirValueSet,
[FromUri(Name = "_format")] string format = null)
{
var foundValueSets = (from vs in this.tdb.ValueSets
join vsi in this.tdb.ValueSetIdentifiers on vs.Id equals vsi.ValueSetId
join fvsi in fhirValueSet.Identifier on vsi.Identifier.ToLower().Trim() equals fvsi.Value.ToLower().Trim()
select vs)
.Distinct();
if (foundValueSets.Count() > 0)
{
throw new Exception("ValueSet already exists with this identifier. Use a PUT instead");
}
ValueSetImporter importer = new ValueSetImporter(this.tdb);
ValueSetExporter exporter = new ValueSetExporter(this.tdb);
ValueSet valueSet = importer.Convert(fhirValueSet);
this.tdb.ValueSets.Add(valueSet);
this.tdb.SaveChanges();
string location = string.Format("{0}://{1}/api/FHIR3/ValueSet/{2}",
this.Request.RequestUri.Scheme,
this.Request.RequestUri.Authority,
fhirValueSet.Id);
Dictionary <string, string> headers = new Dictionary <string, string>();
headers.Add("Location", location);
FhirValueSet createdFhirValueSet = exporter.Convert(valueSet);
return(Shared.GetResponseMessage(this.Request, format, createdFhirValueSet, statusCode: 201, headers: headers));
}
public HttpResponseMessage GetValueSetExpansion(
[FromUri] int valueSetId,
[FromUri(Name = "_format")] string format = null,
[FromUri(Name = "_summary")] SummaryType?summary = null)
{
ValueSet valueSet = this.tdb.ValueSets.Single(y => y.Id == valueSetId);
ValueSetExporter exporter = new ValueSetExporter(this.tdb);
FhirValueSet fhirValueSet = exporter.Convert(valueSet, summary);
return(Shared.GetResponseMessage(this.Request, format, fhirValueSet));
}
public HttpResponseMessage GetValueSets(
[FromUri(Name = "_id")] int?valueSetId = null,
[FromUri(Name = "name")] string name = null,
[FromUri(Name = "_format")] string format = null,
[FromUri(Name = "_summary")] SummaryType?summary = null)
{
var valueSets = this.tdb.ValueSets.Where(y => y.Id >= 0);
ValueSetExporter exporter = new ValueSetExporter(this.tdb);
if (valueSetId != null)
{
valueSets = valueSets.Where(y => y.Id == valueSetId);
}
if (!string.IsNullOrEmpty(name))
{
valueSets = valueSets.Where(y => y.Name.ToLower().Contains(name.ToLower()));
}
Bundle bundle = new Bundle()
{
Type = Bundle.BundleType.BatchResponse
};
var publishedValueSets = (from ig in this.tdb.ImplementationGuides
join t in this.tdb.Templates on ig.Id equals t.OwningImplementationGuideId
join tc in this.tdb.TemplateConstraints on t.Id equals tc.TemplateId
where ig.PublishStatus != null && ig.PublishStatus.Status == PublishStatus.PUBLISHED_STATUS && tc.ValueSet != null
select tc.ValueSet)
.ToList(); // Query the database immediately
foreach (var valueSet in valueSets)
{
var fhirValueSet = exporter.Convert(valueSet, summary, publishedValueSets);
var fullUrl = string.Format("{0}://{1}/api/FHIR3/ValueSet/{2}",
this.Request.RequestUri.Scheme,
this.Request.RequestUri.Authority,
valueSet.Id);
bundle.AddResourceEntry(fhirValueSet, fullUrl);
}
return(Shared.GetResponseMessage(this.Request, format, bundle));
}
public HttpResponseMessage CreateValueSet(
[FromBody] FhirValueSet fhirValueSet,
[FromUri(Name = "_format")] string format = null)
{
var fhirIdentifier = fhirValueSet.Identifier.Count > 0 ? fhirValueSet.Identifier.First() : null;
var fhirIdentifierValue = fhirIdentifier != null ? fhirIdentifier.Value : null;
if (fhirValueSet.Identifier != null && this.tdb.ValueSets.Count(y => y.Oid == fhirIdentifierValue) > 0)
{
throw new Exception("ValueSet already exists with this identifier. Use a PUT instead");
}
ValueSetImporter importer = new ValueSetImporter(this.tdb);
ValueSetExporter exporter = new ValueSetExporter(this.tdb);
ValueSet valueSet = importer.Convert(fhirValueSet);
if (valueSet.Oid == null)
{
valueSet.Oid = string.Empty;
}
if (this.tdb.ValueSets.Count(y => y.Oid == valueSet.Oid) > 0)
{
throw new Exception("A ValueSet with that identifier already exists");
}
this.tdb.ValueSets.AddObject(valueSet);
this.tdb.SaveChanges();
string location = string.Format("{0}://{1}/api/FHIR3/ValueSet/{2}",
this.Request.RequestUri.Scheme,
this.Request.RequestUri.Authority,
fhirValueSet.Id);
Dictionary <string, string> headers = new Dictionary <string, string>();
headers.Add("Location", location);
FhirValueSet createdFhirValueSet = exporter.Convert(valueSet);
return(Shared.GetResponseMessage(this.Request, format, createdFhirValueSet, statusCode: 201, headers: headers));
}
public HttpResponseMessage GetValueSets(
[FromUri(Name = "_id")] int?valueSetId = null,
[FromUri(Name = "name")] string name = null,
[FromUri(Name = "_format")] string format = null,
[FromUri(Name = "_summary")] SummaryType?summary = null)
{
var valueSets = this.tdb.ValueSets.Where(y => y.Id >= 0);
ValueSetExporter exporter = new ValueSetExporter(this.tdb);
if (valueSetId != null)
{
valueSets = valueSets.Where(y => y.Id == valueSetId);
}
if (!string.IsNullOrEmpty(name))
{
valueSets = valueSets.Where(y => y.Name.ToLower().Contains(name.ToLower()));
}
Bundle bundle = new Bundle()
{
Type = Bundle.BundleType.BatchResponse
};
foreach (var valueSet in valueSets)
{
var fhirValueSet = exporter.Convert(valueSet, summary);
var fullUrl = string.Format("{0}://{1}/api/FHIR2/{2}",
this.Request.RequestUri.Scheme,
this.Request.RequestUri.Authority,
fhirValueSet.Url);
bundle.AddResourceEntry(fhirValueSet, fullUrl);
}
return(Shared.GetResponseMessage(this.Request, format, bundle));
}
public HttpResponseMessage Export(ExportSettingsModel model)
{
ImplementationGuide ig = this.tdb.ImplementationGuides.SingleOrDefault(y => y.Id == model.ImplementationGuideId);
if (model.TemplateIds == null)
{
model.TemplateIds = ig.GetRecursiveTemplates(this.tdb, categories: model.SelectedCategories.ToArray()).Select(y => y.Id).ToList();
}
List <Template> templates = this.tdb.Templates.Where(y => model.TemplateIds.Contains(y.Id)).ToList();
SimpleSchema schema = SimplifiedSchemaContext.GetSimplifiedSchema(HttpContext.Current.Application, ig.ImplementationGuideType);
IIGTypePlugin igTypePlugin = IGTypePluginFactory.GetPlugin(ig.ImplementationGuideType);
IGSettingsManager igSettings = new IGSettingsManager(this.tdb, model.ImplementationGuideId);
bool isCDA = ig.ImplementationGuideType.SchemaURI == "urn:hl7-org:v3";
string fileName;
byte[] export;
string contentType = null;
switch (model.ExportFormat)
{
case ExportFormats.FHIR_Build_Package:
case ExportFormats.FHIR_Bundle:
case ExportFormats.Native_XML:
case ExportFormats.Templates_DSTU_XML:
string fileExtension = model.ReturnJson ? "json" : "xml";
contentType = model.ReturnJson ? JSON_MIME_TYPE : XML_MIME_TYPE;
if (model.ExportFormat == ExportFormats.FHIR_Build_Package)
{
fileExtension = "zip";
contentType = ZIP_MIME_TYPE;
}
fileName = string.Format("{0}.{1}", ig.GetDisplayName(true), fileExtension);
var pluginExporter = igTypePlugin.GetExporter();
export = pluginExporter.Export(this.tdb, schema, model.ExportFormat, igSettings, model.SelectedCategories, templates, model.IncludeVocabulary, model.ReturnJson);
break;
case ExportFormats.Snapshot_JSON:
ImplementationGuideController ctrl = new ImplementationGuideController(this.tdb);
var dataModel = ctrl.GetViewData(model.ImplementationGuideId, null, null, true);
// Serialize the data to JSON
var jsonSerializer = new System.Web.Script.Serialization.JavaScriptSerializer();
jsonSerializer.MaxJsonLength = Int32.MaxValue;
export = System.Text.Encoding.UTF8.GetBytes(jsonSerializer.Serialize(dataModel));
// Set the filename to JSON
fileName = string.Format("{0}.json", ig.GetDisplayName(true));
contentType = JSON_MIME_TYPE;
break;
case ExportFormats.Microsoft_Word_DOCX:
ImplementationGuideGenerator generator = new ImplementationGuideGenerator(this.tdb, model.ImplementationGuideId, model.TemplateIds);
fileName = string.Format("{0}.docx", ig.GetDisplayName(true));
ExportSettings lConfig = new ExportSettings();
lConfig.Use(c =>
{
c.GenerateTemplateConstraintTable = model.TemplateTables == TemplateTableOptions.ConstraintOverview || model.TemplateTables == TemplateTableOptions.Both;
c.GenerateTemplateContextTable = model.TemplateTables == TemplateTableOptions.Context || model.TemplateTables == TemplateTableOptions.Both;
c.GenerateDocTemplateListTable = model.DocumentTables == DocumentTableOptions.List || model.DocumentTables == DocumentTableOptions.Both;
c.GenerateDocContainmentTable = model.DocumentTables == DocumentTableOptions.Containment || model.DocumentTables == DocumentTableOptions.Both;
c.AlphaHierarchicalOrder = model.TemplateSortOrder == TemplateSortOrderOptions.AlphaHierarchically;
c.DefaultValueSetMaxMembers = model.ValueSetTables ? model.MaximumValueSetMembers : 0;
c.GenerateValueSetAppendix = model.ValueSetAppendix;
c.IncludeXmlSamples = model.IncludeXmlSample;
c.IncludeChangeList = model.IncludeChangeList;
c.IncludeTemplateStatus = model.IncludeTemplateStatus;
c.IncludeNotes = model.IncludeNotes;
c.IncludeVolume1 = model.IncludeVolume1;
c.SelectedCategories = model.SelectedCategories;
c.GenerateRequiredAndOptionalSectionsTable = model.GenerateRequiredAndOptionalSectionsTable;
c.DocumentTemplateTypeId = model.DocumentTemplateTypeId;
c.SectionTemplateTypeId = model.SectionTemplateTypeId;
});
if (model.ValueSetOid != null && model.ValueSetOid.Count > 0)
{
Dictionary <string, int> valueSetMemberMaximums = new Dictionary <string, int>();
for (int i = 0; i < model.ValueSetOid.Count; i++)
{
if (valueSetMemberMaximums.ContainsKey(model.ValueSetOid[i]))
{
continue;
}
valueSetMemberMaximums.Add(model.ValueSetOid[i], model.ValueSetMaxMembers[i]);
}
lConfig.ValueSetMaxMembers = valueSetMemberMaximums;
}
generator.BuildImplementationGuide(lConfig, ig.ImplementationGuideType.GetPlugin());
export = generator.GetDocument();
contentType = DOCX_MIME_TYPE;
break;
case ExportFormats.Schematron_SCH:
string schematronResult = SchematronGenerator.Generate(tdb, ig, model.IncludeCustomSchematron, VocabularyOutputType.Default, model.VocabularyFileName, templates, model.SelectedCategories, model.DefaultSchematron);
export = ASCIIEncoding.UTF8.GetBytes(schematronResult);
fileName = string.Format("{0}.sch", ig.GetDisplayName(true));
contentType = XML_MIME_TYPE;
if (model.IncludeVocabulary)
{
using (ZipFile zip = new ZipFile())
{
zip.AddEntry(fileName, export);
NativeTerminologyExporter nativeTermExporter = new NativeTerminologyExporter(this.tdb);
byte[] vocData = nativeTermExporter.GetExport(ig.Id, model.MaximumValueSetMembers, this.GetExportEncoding(model));
string vocFileName = string.Format("{0}", model.VocabularyFileName);
//Ensuring the extension is present in case input doesn't have it
if (vocFileName.IndexOf(".xml") == -1)
{
vocFileName += ".xml";
}
zip.AddEntry(vocFileName, vocData);
using (MemoryStream ms = new MemoryStream())
{
zip.Save(ms);
fileName = string.Format("{0}.zip", ig.GetDisplayName(true));
contentType = ZIP_MIME_TYPE;
export = ms.ToArray();
}
}
}
break;
case ExportFormats.Vocabulary_XLSX:
fileName = string.Format("{0}.xlsx", ig.GetDisplayName(true));
contentType = XLSX_MIME_TYPE;
ExcelExporter excelExporter = new ExcelExporter(this.tdb);
export = excelExporter.GetSpreadsheet(ig.Id, model.MaximumValueSetMembers);
break;
case ExportFormats.Vocbulary_Single_SVS_XML:
fileName = string.Format("{0}_SingleSVS.xml", ig.GetDisplayName(true));
contentType = XML_MIME_TYPE;
SingleSVSExporter ssvsExporter = new SingleSVSExporter(this.tdb);
export = ssvsExporter.GetExport(ig.Id, model.MaximumValueSetMembers, this.GetExportEncoding(model));
break;
case ExportFormats.Vocabulary_Multiple_SVS_XML:
fileName = string.Format("{0}_MultipleSVS.xml", ig.GetDisplayName(true));
contentType = XML_MIME_TYPE;
MultipleSVSExporter msvsExporter = new MultipleSVSExporter(this.tdb);
export = msvsExporter.GetExport(ig.Id, model.MaximumValueSetMembers, this.GetExportEncoding(model));
break;
case ExportFormats.Vocabulary_Native_XML:
fileName = string.Format("{0}_MultipleSVS.xml", ig.GetDisplayName(true));
contentType = XML_MIME_TYPE;
NativeTerminologyExporter nativeExporter = new NativeTerminologyExporter(this.tdb);
export = nativeExporter.GetExport(ig.Id, model.MaximumValueSetMembers, this.GetExportEncoding(model));
break;
case ExportFormats.Web_HTML:
// Get the data from the API controller
HtmlExporter exporter = new HtmlExporter(this.tdb);
var templateIds = templates.Select(y => y.Id).ToArray();
var htmlDataModel = exporter.GetExportData(ig.Id, null, templateIds, model.IncludeInferred);
IGController igController = new IGController(this.tdb);
var downloadPackage = igController.GetDownloadPackage(ig, JsonConvert.SerializeObject(htmlDataModel));
export = downloadPackage.Content;
fileName = downloadPackage.FileName;
contentType = ZIP_MIME_TYPE;
break;
case ExportFormats.Vocbulary_Bundle_FHIR_XML:
ValueSetExporter vsExporter = new ValueSetExporter(this.tdb);
var bundle = vsExporter.GetImplementationGuideValueSets(ig);
if (model.ReturnJson)
{
export = fhir_stu3.Hl7.Fhir.Serialization.FhirSerializer.SerializeResourceToJsonBytes(bundle);
fileName = string.Format("{0}_fhir_voc.json", ig.GetDisplayName(true));
contentType = JSON_MIME_TYPE;
}
else
{
export = fhir_stu3.Hl7.Fhir.Serialization.FhirSerializer.SerializeResourceToXmlBytes(bundle);
fileName = string.Format("{0}_fhir_voc.xml", ig.GetDisplayName(true));
contentType = XML_MIME_TYPE;
}
break;
default:
throw new NotSupportedException();
}
return(GetExportResponse(fileName, contentType, export));
}
