public static T Deserialize <T>(System.Xml.XmlReader reader, bool removeFirstElement)
{
T result = default(T);
System.Xml.Serialization.XmlSerializer xs = new System.Xml.Serialization.XmlSerializer(typeof(T));
if (removeFirstElement)
{
if (reader.Read())
{
// Position should be on first element
if (reader.Read())
{
// Position should be on first child element, thereby removing the first element when
// the ReadSubtree method is called.
if (xs.CanDeserialize(reader.ReadSubtree()))
{
result = (T)xs.Deserialize(reader.ReadSubtree());
}
}
}
}
else if (xs.CanDeserialize(reader))
{
result = (T)xs.Deserialize(reader);
}
return(result);
}
/// <summary>
/// Load L-System definition file
/// </summary>
public void LoadDefinition()
{
Microsoft.Win32.OpenFileDialog dlg = new Microsoft.Win32.OpenFileDialog();
dlg.DefaultExt = ".ls"; // Default file extension
dlg.Filter = "L-System files(*.ls)|*.ls|All files (*.*)|*.*"; // Filter files by extension
// Show save file dialog box
bool?result = dlg.ShowDialog();
// Process save file dialog box results
if (result == true)
{
// Load document
string filename = dlg.FileName;
try
{
System.Xml.Serialization.XmlSerializer x = new System.Xml.Serialization.XmlSerializer(_model.GetType());
using (System.Xml.XmlReader reader = new System.Xml.XmlTextReader(filename))
{
if (x.CanDeserialize(reader))
{
_model = x.Deserialize(reader) as SettingsModel;
}
reader.Close();
}
}
catch
{
System.Windows.MessageBox.Show("Couldn't load L-System, please try again later.", "Error", System.Windows.MessageBoxButton.OK, System.Windows.MessageBoxImage.Error);
}
}
// update all properties
InvokePropertyChanged(null);
}
/// <summary>
/// Deserializes the XML content to a specified object
/// </summary>
/// <param name="xml">
/// <returns></returns>
public T Deserialize()
{
string xml = String.Empty;
var fileStream = new FileStream(@"D:\\DotNET\\test\\CaseInstaller.xml", FileMode.Open, FileAccess.Read);
using (var streamReader = new StreamReader(fileStream, Encoding.UTF8))
{
xml = streamReader.ReadToEnd();
}
T result = default(T);
if (!string.IsNullOrEmpty(xml))
{
System.IO.TextReader textreader = new System.IO.StringReader(xml);
System.Xml.XmlReader xmlreader = System.Xml.XmlReader.Create(textreader);
System.Xml.Serialization.XmlSerializer serializer = new System.Xml.Serialization.XmlSerializer(typeof(T));
if (serializer.CanDeserialize(xmlreader))
{
result = (T)serializer.Deserialize(xmlreader);
}
}
return(result);
}
/// <summary>
/// این متد یک فولدر را می گیرد و لیست فایلها و یا نام فایل هائی که قابل دسترس هستند را باز می گرداند
/// </summary>
public static List <string> GetBooksOfFolder(string folderPath, bool onlyFileName)
{
System.IO.StreamReader objStream = null;
try
{
List <string> returnValue = new List <string>();
System.Xml.Serialization.XmlSerializer objSerializer = new System.Xml.Serialization.XmlSerializer(typeof(List <GoodSpeechOfBigMan>));
System.Xml.XmlReader objXMLReader;
string[] aryFile = System.IO.Directory.GetFiles(folderPath);
foreach (string itemFileName in aryFile)
{
objStream = new System.IO.StreamReader(itemFileName);
objXMLReader = System.Xml.XmlReader.Create(objStream);
if (objSerializer.CanDeserialize(objXMLReader))
{
if (onlyFileName)
{
returnValue.Add(System.IO.Path.GetFileNameWithoutExtension(itemFileName));
}
else
{
returnValue.Add(itemFileName);
}
}
}
return(returnValue);
}
catch (System.Exception ex)
{
System.Exception newEx = new System.Exception("برنامه هنگام شناسائی لیست کتاب های جملات زیبا دچار خطا شده است", ex);
newEx.Data.Add(SeifaeiBrothersException.cntKeyNameExceptionID, "6C178EE4-8DD5-43CD-BEFA-3C3A9AB464CB");
throw newEx;
}
}
public bool TryGetTypeGeneral(string value, out object result)
{
System.Xml.Serialization.XmlSerializer xs = new System.Xml.Serialization.XmlSerializer(value.GetType());
using (System.IO.TextReader tr = new System.IO.StringReader(value))
{
System.Xml.XmlReader xr;
try {
xr = System.Xml.XmlReader.Create(tr);
}
catch
{
result = default(T);
return(false);
}
if (xs.CanDeserialize(xr))
{
result = (T)xs.Deserialize(xr);
return(true);
}
else
{
result = default(T);
return(false);
}
}
}
static public string[] NameAndCasNmber(string compoundName)
{
string[] retVal = new string[2];
gov.nih.nlm.chemspell.SpellAidService service = new gov.nih.nlm.chemspell.SpellAidService();
string response = service.getSugList(compoundName, "All databases");
var XMLReader = new System.Xml.XmlTextReader(new System.IO.StringReader(response));
System.Xml.Serialization.XmlSerializer serializer = new System.Xml.Serialization.XmlSerializer(typeof(Synonym));
if (serializer.CanDeserialize(XMLReader))
{
Synonym synonym = (Synonym)serializer.Deserialize(XMLReader);
foreach (SynonymChemical chemical in synonym.Chemical)
{
int result = String.Compare(compoundName, chemical.Name, true);
if (result == 0)
{
retVal[0] = chemical.CAS;
retVal[1] = chemical.Name;
return retVal;
}
}
}
serializer = new System.Xml.Serialization.XmlSerializer(typeof(SpellAid));
if (serializer.CanDeserialize(XMLReader))
{
SpellAid aid = (SpellAid)serializer.Deserialize(XMLReader);
bool different = true;
retVal[0] = aid.Chemical[0].CAS;
retVal[1] = aid.Chemical[0].Name;
for (int i = 0; i < aid.Chemical.Length - 1; i++)
{
if (retVal[0] != aid.Chemical[i + 1].CAS)
{
different = false;
retVal[0] = aid.Chemical[i].CAS;
retVal[1] = aid.Chemical[i].Name;
}
}
if (!different)
{
foreach (SpellAidChemical chemical in aid.Chemical)
{
int result = String.Compare(compoundName, 0, chemical.Name, 0, compoundName.Length, true);
if (result == 0 && compoundName.Length >= chemical.Name.Length)
{
retVal[0] = chemical.CAS;
retVal[1] = chemical.Name;
return retVal;
}
}
SelectChemicalForm form = new SelectChemicalForm(aid, compoundName);
form.ShowDialog();
retVal[0] = form.SelectedChemical.CAS;
retVal[1] = form.SelectedChemical.Name;
return retVal;
}
}
return retVal;
}
public static T Deserialize(XmlReader reader)
{
if (!_serializer.CanDeserialize(reader))
{
throw new InvalidDataException("Failed to read Xml.");
}
return((T)_serializer.Deserialize(reader));
}
public static T Deserialize <T>(string xml)
{
T result = default(T);
if (!string.IsNullOrEmpty(xml))
{
System.IO.TextReader tr = new System.IO.StringReader(xml);
System.Xml.XmlReader reader = System.Xml.XmlReader.Create(tr);
System.Xml.Serialization.XmlSerializer serializer = new System.Xml.Serialization.XmlSerializer(typeof(T));
if (serializer.CanDeserialize(reader))
{
result = (T)serializer.Deserialize(reader);
}
}
return(result);
}
public static Preferences Load()
{
Preferences pref = null;
if (File.Exists(Preferences.FileFullPath))
{
var serializer = new System.Xml.Serialization.XmlSerializer(typeof(Preferences));
using (var xmlReader = new System.Xml.XmlTextReader(Preferences.FileFullPath))
{
if (serializer.CanDeserialize(xmlReader))
{
pref = serializer.Deserialize(xmlReader) as Preferences;
}
}
}
return((pref == null) ? new Preferences() : pref);
}
/// <summary>
/// XMLファイル読込み
/// </summary>
/// <typeparam name="T">クラス</typeparam>
/// <param name="readPath">読込パス</param>
/// <param name="readData">デシリアライズされたクラス</param>
/// <returns>読込み正否</returns>
public static Boolean TryLoad <T>(String readPath, out T readData) where T : class
{
readData = default(T);
try
{
// 読み込み用オブジェ作成
var serializer = new System.Xml.Serialization.XmlSerializer(typeof(T));
// 読込み
using (var sr = new StreamReader(readPath, new UTF8Encoding(false)))
{ // デシリアライズできるか判定を設ける
if (serializer.CanDeserialize(new XmlTextReader(sr)))
{
readData = serializer.Deserialize(sr) as T;
return(true); // 読込み成功時にはTrue
}
}
}
catch (Exception) { return(false); }
return(false);// 何も無くきた場合は、読込できなかったとしてfalse
}
/// <summary>
/// Load embedded example
/// </summary>
/// <param name="name">Example file name</param>
public void LoadExample(string name)
{
try
{
System.Xml.Serialization.XmlSerializer x = new System.Xml.Serialization.XmlSerializer(_model.GetType());
using (System.Xml.XmlReader reader = new System.Xml.XmlTextReader(System.Windows.Application.GetResourceStream(new System.Uri("/examples/" + name, UriKind.Relative)).Stream))
{
if (x.CanDeserialize(reader))
{
_model = x.Deserialize(reader) as SettingsModel;
}
reader.Close();
}
// update all properties
InvokePropertyChanged(null);
}
catch
{
System.Windows.MessageBox.Show("Couldn't load L-System, please try again later.", "Error", System.Windows.MessageBoxButton.OK, System.Windows.MessageBoxImage.Error);
}
}
private void findCompound(ref string compoundName, ref string CasNo)
{
gov.nih.nlm.chemspell.SpellAidService service = new gov.nih.nlm.chemspell.SpellAidService();
string response = service.getSugList(compoundName, "All databases");
response = response.Replace("&", "&");
var XMLReader = new System.Xml.XmlTextReader(new System.IO.StringReader(response));
System.Xml.Serialization.XmlSerializer serializer = new System.Xml.Serialization.XmlSerializer(typeof(Synonym));
if (serializer.CanDeserialize(XMLReader))
{
// Synonyms means more than one name for the same chemical/CAS Number.
Synonym synonym = (Synonym)serializer.Deserialize(XMLReader);
CasNo = synonym.Chemical[0].CAS;
this.listBox1.BeginUpdate();
foreach (SynonymChemical chemical in synonym.Chemical)
{
this.listBox1.Items.Add(chemical.Name);
if (CasNo != chemical.CAS)
{
System.Windows.Forms.MessageBox.Show(compoundName + " has a synonym with a different CAS Number.");
return;
}
}
this.listBox1.EndUpdate();
return;
}
serializer = new System.Xml.Serialization.XmlSerializer(typeof(SpellAid));
if (serializer.CanDeserialize(XMLReader))
{
SpellAid aid = (SpellAid)serializer.Deserialize(XMLReader);
Form3 selector = new Form3();
selector.chemicals = aid;
selector.ShowDialog();
compoundName = selector.SelectedChemical;
this.findCompound(ref compoundName, ref CasNo);
return;
}
CasNo = string.Empty;
}
/// <summary>
/// Load embedded example
/// </summary>
/// <param name="name">Example file name</param>
public void LoadExample(string name)
{
try
{
System.Xml.Serialization.XmlSerializer x = new System.Xml.Serialization.XmlSerializer(_model.GetType());
using (System.Xml.XmlReader reader = new System.Xml.XmlTextReader(System.Windows.Application.GetResourceStream(new System.Uri("/examples/" + name, UriKind.Relative)).Stream))
{
if (x.CanDeserialize(reader))
_model = x.Deserialize(reader) as SettingsModel;
reader.Close();
}
// update all properties
InvokePropertyChanged(null);
}
catch
{
System.Windows.MessageBox.Show("Couldn't load L-System, please try again later.", "Error", System.Windows.MessageBoxButton.OK, System.Windows.MessageBoxImage.Error);
}
}
/// <summary>
/// Load L-System definition file
/// </summary>
public void LoadDefinition()
{
Microsoft.Win32.OpenFileDialog dlg = new Microsoft.Win32.OpenFileDialog();
dlg.DefaultExt = ".ls"; // Default file extension
dlg.Filter = "L-System files(*.ls)|*.ls|All files (*.*)|*.*"; // Filter files by extension
// Show save file dialog box
bool? result = dlg.ShowDialog();
// Process save file dialog box results
if (result == true)
{
// Load document
string filename = dlg.FileName;
try
{
System.Xml.Serialization.XmlSerializer x = new System.Xml.Serialization.XmlSerializer(_model.GetType());
using (System.Xml.XmlReader reader = new System.Xml.XmlTextReader(filename))
{
if (x.CanDeserialize(reader))
_model = x.Deserialize(reader) as SettingsModel;
reader.Close();
}
}
catch
{
System.Windows.MessageBox.Show("Couldn't load L-System, please try again later.", "Error", System.Windows.MessageBoxButton.OK, System.Windows.MessageBoxImage.Error);
}
}
// update all properties
InvokePropertyChanged(null);
}
private void button2_Click(object sender, EventArgs e)
{
this.dataGridView1.Visible = false;
compoundName = this.textBox1.Text;
casNo = NISTChemicalList.casNumber(compoundName);
if (string.IsNullOrEmpty(casNo))
{
gov.nih.nlm.chemspell.SpellAidService service = new gov.nih.nlm.chemspell.SpellAidService();
string response = service.getSugList(compoundName, "All databases");
var XMLReader = new System.Xml.XmlTextReader(new System.IO.StringReader(response));
System.Xml.Serialization.XmlSerializer serializer = new System.Xml.Serialization.XmlSerializer(typeof(Synonym));
if (serializer.CanDeserialize(XMLReader))
{
// Synonyms means more than one name for the same chemical/CAS Number.
Synonym synonym = (Synonym)serializer.Deserialize(XMLReader);
casNo = synonym.Chemical[0].CAS;
foreach (SynonymChemical chemical in synonym.Chemical)
{
if (casNo != chemical.CAS)
{
System.Windows.Forms.MessageBox.Show(compoundName + "has a synonym with a different CAS Number.");
return;
}
}
label2.Text = "The CAS Number of the chemical is: " + casNo + ". Now select the finished button to exit.";
return;
}
serializer = new System.Xml.Serialization.XmlSerializer(typeof(SpellAid));
if (serializer.CanDeserialize(XMLReader))
{
SpellAid aid = (SpellAid)serializer.Deserialize(XMLReader);
//bool different = true;
chemicalList = new List<SpellAidChemical>();
foreach (SpellAidChemical chemical in aid.Chemical)
{
chemicalList.Add(chemical);
}
this.dataGridView1.DataSource = chemicalList;
this.dataGridView1.Visible = true;
this.label2.Text = "Select the desired chemical from the list below and click the 'Finished' button to exit.";
return;
// retVal[0] = aid.Chemical[0].CAS;
// retVal[1] = aid.Chemical[0].Name;
// for (int i = 0; i < aid.Chemical.Length - 1; i++)
// {
// if (retVal[0] != aid.Chemical[i + 1].CAS)
// {
// different = false;
// retVal[0] = aid.Chemical[i].CAS;
// retVal[1] = aid.Chemical[i].Name;
// }
// }
// if (!different)
// {
// foreach (SpellAidChemical chemical in aid.Chemical)
// {
// int result = String.Compare(compoundName, 0, chemical.Name, 0, compoundName.Length, true);
// if (result == 0 && compoundName.Length >= chemical.Name.Length)
// {
// retVal[0] = chemical.CAS;
// retVal[1] = chemical.Name;
// return retVal;
// }
// }
// SelectChemicalForm form = new SelectChemicalForm(aid, compoundName);
// form.ShowDialog();
// retVal[0] = form.SelectedChemical.CAS;
// retVal[1] = form.SelectedChemical.Name;
// return retVal;
// }
}
}
label2.Text = "The CAS Number of the chemical is: " + casNo + ". Now select the 'Finished' button to exit.";
return;
}
/// <summary>
/// Perform an upsert operation by either creating a contact or merging
/// the given data into all contacts that match the provided merge
/// column. For example, if the email field is provided in the fields
/// parameter and is also specified as the merge column, all contacts
/// with that email value will have their entries updated with the new
/// data. If there is no match, a new contact will be created.
/// </summary>
/// <param name="fields">The fields to create / update.</param>
/// <param name="mergeColumnID">The column ID to merge upon.</param>
/// <returns>A collection containing all contacts modified by the
/// <param name="listIDs">An array of list IDs to add the contact(s) to.
/// </param>
/// operation.</returns>
public Responses.ContactCollection UpsertContact(Dictionary <string, string> fields, string mergeColumnID, int[] listIDs)
{
Dictionary <string, string> queryParameters = new Dictionary <string, string>();
queryParameters.Add("mergecolumn", mergeColumnID);
Requests.ContactEntity contact = new Requests.ContactEntity();
Requests.FieldEntity[] fieldArray = new Requests.FieldEntity[fields.Count];
int fieldCounter = 0;
foreach (KeyValuePair <string, string> f in fields)
{
Requests.FieldEntity fieldEntity = new Requests.FieldEntity();
fieldEntity.ID = f.Key;
fieldEntity.Value = f.Value;
fieldArray[fieldCounter++] = fieldEntity;
}
contact.Fields = fieldArray;
if (listIDs.Length > 0)
{
int listCounter = 0;
Requests.ListEntity[] listArray = new Requests.ListEntity[listIDs.Length];
foreach (int id in listIDs)
{
Requests.ListEntity listEntity = new Requests.ListEntity();
listEntity.ID = id;
listArray[listCounter++] = listEntity;
}
contact.ListIds = listArray;
}
contact.ID = null;
string xml = this.connection.Call <string>("POST", "contactmanager/contacts", queryParameters, contact);
//We're going to deserialize ourselves, since the response could be
//either a contact collection or a contact entity. We're going to
//turn the contact entity into a collection for consistency.
using (System.Xml.XmlReader reader = new System.Xml.XmlTextReader(new System.IO.StringReader(xml)))
{
//If it's a collection, return it.
System.Xml.Serialization.XmlSerializer serializer = new System.Xml.Serialization.XmlSerializer(typeof(Responses.ContactCollection));
if (serializer.CanDeserialize(reader))
{
return((Responses.ContactCollection)serializer.Deserialize(reader));
}
serializer = new System.Xml.Serialization.XmlSerializer(typeof(Responses.ContactEntity));
//If it's an entity, create a collection and put the contact in it.
if (serializer.CanDeserialize(reader))
{
Responses.ContactEntity c = (Responses.ContactEntity)serializer.Deserialize(reader);
Responses.ContactCollection contactCollection = new Responses.ContactCollection();
contactCollection.Contacts = new Responses.ContactEntity[] { (Responses.ContactEntity)c };
return(contactCollection);
}
else
{
throw new Exception("Invalid XML response: could not deserialize into a ContactEntity or ContactCollection.");
}
}
}
private void ToxnetHSDBButton_Click_1(object sender, EventArgs e)
{
string uriString = "https://toxgate.nlm.nih.gov/cgi-bin/sis/search2";
System.Net.HttpWebRequest request = (System.Net.HttpWebRequest)System.Net.WebRequest.Create(uriString);
request = (System.Net.HttpWebRequest)System.Net.WebRequest.Create(uriString);
string postData = "queryxxx=" + m_casNo;
postData += "&chemsyn=1";
postData += "&database=hsdb";
postData += "&Stemming=1";
postData += "&and=1";
postData += "&second_search=1";
postData += "&gateway=1";
var data = Encoding.ASCII.GetBytes(postData);
request.Method = "POST";
request.ContentType = "application/x-www-form-urlencoded";
request.ContentLength = data.Length;
using (var stream = request.GetRequestStream())
{
stream.Write(data, 0, data.Length);
}
System.Net.WebResponse response = (System.Net.HttpWebResponse)request.GetResponse();
string responseString = new System.IO.StreamReader(response.GetResponseStream()).ReadToEnd();
string s1 = responseString.Replace("<br>", "");
var XMLReader = new System.Xml.XmlTextReader(new System.IO.StringReader(s1));
System.Xml.Serialization.XmlSerializer serializer = new System.Xml.Serialization.XmlSerializer(typeof(QueryResult));
if (serializer.CanDeserialize(XMLReader))
{
// Synonyms means more than one name for the same chemical/CAS Number.
QueryResult result = (QueryResult)serializer.Deserialize(XMLReader);
uriString = "https://toxgate.nlm.nih.gov/cgi-bin/sis/search2/f?" + result.TemporaryFile;
string[] ids = result.Id.Split(' ');
System.Diagnostics.Process.Start("http://toxgate.nlm.nih.gov/cgi-bin/sis/search2/r?dbs+hsdb:@term+@DOCNO+" + ids[0]);
}
}
