private SpecimenEvents UpdateSequencingEvent(int specimenId, string status, DateTime?statusDate, string statusResult)
{
SpecimenEvents sequenceEvent = GetSequencingEvent(specimenId);
if (sequenceEvent == null)
{
sequenceEvent = new SpecimenEvents();
sequenceEvent[SpecimenEvents.SpecimenId] = specimenId;
sequenceEvent[SpecimenEvents.EventType] = status;
}
if (statusDate.HasValue)
{
sequenceEvent[SpecimenEvents.EventDate] = statusDate.Value;
sequenceEvent[SpecimenEvents.EventDateText] = statusDate.Value.ToShortDateString();
}
else
{
sequenceEvent[SpecimenEvents.EventDate] = null;
sequenceEvent[SpecimenEvents.EventDateText] = null;
}
sequenceEvent[SpecimenEvents.EventResult] = statusResult;
sequenceEvent.Save();
return(sequenceEvent);
}
private void DeleteSequencingEvent(int specimenId)
{
SpecimenEvents sequenceEvent = GetSequencingEvent(specimenId);
if (sequenceEvent != null)
{
sequenceEvent.Delete((int)sequenceEvent[sequenceEvent.PrimaryKeyName]);
}
}
protected void HandleRowDeleting(object sender, GridViewDeleteEventArgs e)
{
object key = (sender as GridView).DataKeys[e.RowIndex][SpecimenEvents.SpecimenEventId];
if (key != null && key.ToString() != "")
{
int priKey = int.Parse(key.ToString());
SpecimenEvents biz = new SpecimenEvents();
biz.Delete(priKey);
BindSpecimenEventsGrid();
Page.Response.Redirect(Page.Request.Url.ToString(), true);
}
}
/// <summary>
/// Updates/Saves a row in the Grid
/// </summary>
/// <param name="sender"></param>
/// <param name="args"></param>
protected void HandleRowUpdating(object sender, GridViewUpdateEventArgs args)
{
// Occurs when no real data/rows present in Grid
// NOTE: Footer control is null in this case, as grid has no real data
if (args.RowIndex < 0 && SpecimenEventsGridView.FooterRow == null)
{
CaisisGridView.ExtractCaisisInputValuesFromContainer(SpecimenEventsGridView, args.NewValues);
}
// Occurs when adding a record to a grid with data, values are in footer row
else if (args.RowIndex < 0 && SpecimenEventsGridView.FooterRow != null)
{
CaisisGridView.ExtractCaisisInputValuesFromContainer(SpecimenEventsGridView.FooterRow, args.NewValues);
}
// Occurs when a row of real data is updating
else
{
CaisisGridView.ExtractCaisisInputValuesFromContainer(SpecimenEventsGridView.Rows[args.RowIndex], args.NewValues);
}
// Create Biz Object
SpecimenEvents biz = new SpecimenEvents();
// If record exits (row of data/not footer)
if (args.NewValues.Contains(SpecimenEvents.SpecimenEventId))
{
int priKey = int.Parse(args.NewValues[SpecimenEvents.SpecimenEventId].ToString());
biz.Get(priKey);
}
// Footer Row, insert specimenid
else
{
biz[SpecimenEvents.SpecimenId] = CurrentSpecimen[Specimen.SpecimenId];
}
// Set biz values
foreach (string field in args.NewValues.Keys)
{
biz[field] = args.NewValues[field];
}
// Save/Update
biz.Save();
// Rebind grid to show saved data
BindSpecimenEventsGrid();
Page.Response.Redirect(Page.Request.Url.ToString(), true);
}
private void PopulateSpecimenDetailsRow(Control row, int specimenId)
{
// Core
HiddenField SpecimenNumField = row.FindControl("SpecimenNumField") as HiddenField;
HiddenField SpecimenSubTypeField = row.FindControl("SpecimenSubTypeField") as HiddenField;
CaisisTextBox StatusDate = row.FindControl("StatusDate") as CaisisTextBox;
// Sequencing
CaisisSelect Sequencing_Failed_Reason = row.FindControl("Sequencing_Failed_Reason") as CaisisSelect;
CaisisRadioButtonList Extraction_Radio = row.FindControl("Extraction_Radio") as CaisisRadioButtonList;
CaisisRadioButtonList Library_Radio = row.FindControl("Library_Radio") as CaisisRadioButtonList;
CaisisRadioButtonList Sequenced_Radio = row.FindControl("Sequenced_Radio") as CaisisRadioButtonList;
// Analysis
CaisisRadioButtonList Analysis_Radio = row.FindControl("Analysis_Radio") as CaisisRadioButtonList;
CaisisRadioButtonList Pathology_Radio = row.FindControl("Pathology_Radio") as CaisisRadioButtonList;
// Pathology
CaisisSelect Analysis_Failed_Reason = row.FindControl("Analysis_Failed_Reason") as CaisisSelect;
CaisisComboBox SpecimenConditionNotes = row.FindControl("SpecimenConditionNotes") as CaisisComboBox;
Specimen specimen = new Specimen();
specimen.Get(specimenId);
string num = specimen[BOL.Specimen.SpecimenReferenceNumber].ToString();
string status = specimen[BOL.Specimen.SpecimenStatus].ToString();
string notes = specimen[BOL.Specimen.SpecimenNotes].ToString();
SpecimenNumField.Value = num;
SpecimenSubTypeField.Value = specimen[BOL.Specimen.SpecimenSubType].ToString();
SpecimenEvents specimenEvent = GetSequencingEvent(specimenId);
// applies to all
if (specimenEvent != null)
{
StatusDate.Value = string.Format("{0:d}", specimenEvent[SpecimenEvents.EventDate]);
}
// set relevant radios
if (InventoryMode == SpecimenInventoryMode.Sequencing)
{
switch (status)
{
case "Tissue Extraction Successful":
Extraction_Radio.Value = ANSWER_YES;
break;
case "Tissue Extraction Unsuccessful":
Extraction_Radio.Value = ANSWER_NO;
if (specimenEvent != null && !specimenEvent.IsNull(SpecimenEvents.EventResult))
{
Sequencing_Failed_Reason.Value = specimenEvent[SpecimenEvents.EventResult].ToString();
}
break;
case "Library Construction Successful":
Extraction_Radio.Value = ANSWER_YES;
Library_Radio.Value = ANSWER_YES;
break;
case "Library Construction Unsuccessful":
Extraction_Radio.Value = ANSWER_YES;
Library_Radio.Value = ANSWER_NO;
if (specimenEvent != null && !specimenEvent.IsNull(SpecimenEvents.EventResult))
{
Sequencing_Failed_Reason.Value = specimenEvent[SpecimenEvents.EventResult].ToString();
}
break;
case "Sequenced":
Extraction_Radio.Value = ANSWER_YES;
Library_Radio.Value = ANSWER_YES;
Sequenced_Radio.Value = ANSWER_YES;
break;
case "Sequencing Unsuccessful":
Extraction_Radio.Value = ANSWER_YES;
Library_Radio.Value = ANSWER_YES;
Sequenced_Radio.Value = ANSWER_NO;
if (specimenEvent != null && !specimenEvent.IsNull(SpecimenEvents.EventResult))
{
Sequencing_Failed_Reason.Value = specimenEvent[SpecimenEvents.EventResult].ToString();
}
break;
default:
Extraction_Radio.ClearSelection();
Library_Radio.ClearSelection();
Sequenced_Radio.ClearSelection();
break;
}
}
else if (InventoryMode == SpecimenInventoryMode.Analysis)
{
switch (status)
{
case "Analysis Complete":
Analysis_Radio.Value = ANSWER_YES;
break;
case "Analysis Unsuccessul":
Analysis_Radio.Value = ANSWER_NO;
if (specimenEvent != null && !specimenEvent.IsNull(SpecimenEvents.EventResult))
{
Analysis_Failed_Reason.Value = specimenEvent[SpecimenEvents.EventResult].ToString();
}
break;
default:
Analysis_Radio.ClearSelection();
break;
}
}
else if (InventoryMode == SpecimenInventoryMode.Pathology)
{
switch (status)
{
case "Pathology Review Completed":
Pathology_Radio.Value = ANSWER_YES;
break;
case "Banked by Pathology":
Pathology_Radio.Value = ANSWER_NO;
break;
default:
Pathology_Radio.ClearSelection();
break;
}
// build condition list, fill into notes field
DataTable conditions = new DataTable();
conditions.Columns.Add("Condition");
string foundCondition = "";
foreach (string condition in specimenController.GetConditions())
{
// find selected
if (specimenController.GetSpecimenCondition(notes) == condition)
{
foundCondition = condition;
}
// add data
conditions.Rows.Add(new object[] { condition });
}
SpecimenConditionNotes.BuildComboData(conditions, "Condition", "Condition");
SpecimenConditionNotes.Value = notes;
}
}
