/// <summary>
/// Convert a list of WebSpeciesFact instances
/// to a SpeciesFactList.
/// </summary>
/// <param name="userContext">
/// Information about the user that makes this method call.
/// </param>
/// <param name="webSpeciesFacts">List of WebSpeciesFact instances.</param>
/// <returns>List of SpeciesFact instances.</returns>
protected override SpeciesFactList GetSpeciesFacts(
IUserContext userContext,
List <WebSpeciesFact> webSpeciesFacts)
{
SpeciesFactList speciesFacts;
FactorList factors = CoreData.FactorManager.GetFactors(userContext);
IndividualCategoryList individualCategories = CoreData.FactorManager.GetIndividualCategories(userContext);
PeriodList periods = CoreData.FactorManager.GetPeriods(userContext);
speciesFacts = null;
if (webSpeciesFacts.IsNotEmpty())
{
speciesFacts = new SpeciesFactList();
foreach (WebSpeciesFact webSpeciesFact in webSpeciesFacts)
{
if (webSpeciesFact.QualityId <= (int)SpeciesFactQualityId.Acceptable)
{
speciesFacts.Add(GetSpeciesFact(webSpeciesFact, factors, individualCategories, periods));
}
// else: Bad quality, do not use this species fact.
}
}
return(speciesFacts);
}
/// <summary>
/// Convert a list of WebSpeciesFact instances
/// to a SpeciesFactList.
/// </summary>
/// <param name="userContext">
/// Information about the user that makes this method call.
/// </param>
/// <param name="webSpeciesFacts">List of WebSpeciesFact instances.</param>
/// <returns>List of SpeciesFact instances.</returns>
protected virtual SpeciesFactList GetSpeciesFacts(IUserContext userContext, List <WebSpeciesFact> webSpeciesFacts)
{
SpeciesFactList speciesFacts;
FactorList factors = CoreData.FactorManager.GetFactors(userContext);
IndividualCategoryList individualCategories = CoreData.FactorManager.GetIndividualCategories(userContext);
PeriodList periods = CoreData.FactorManager.GetPeriods(userContext);
ReferenceList references;
SpeciesFactQualityList speciesFactQualities = CoreData.SpeciesFactManager.GetSpeciesFactQualities(userContext);
List <Int32> referenceIds, taxonIds;
TaxonList taxa;
speciesFacts = null;
if (webSpeciesFacts.IsNotEmpty())
{
referenceIds = GetReferenceIds(webSpeciesFacts);
references = CoreData.ReferenceManager.GetReferences(userContext, referenceIds);
taxonIds = GetTaxonIds(webSpeciesFacts);
taxa = CoreData.TaxonManager.GetTaxa(userContext, taxonIds);
speciesFacts = new SpeciesFactList();
foreach (WebSpeciesFact webSpeciesFact in webSpeciesFacts)
{
speciesFacts.Add(GetSpeciesFact(userContext, webSpeciesFact, factors, individualCategories, periods, references, speciesFactQualities, taxa));
}
}
return(speciesFacts);
}
/// <summary>
/// Expands a Species Fact List with empty species facts so that every combination from the user parameter selection is represented.
/// Factor Headers are excluded.
/// Periodic factors are not expanded to individual categories other than the default.
/// </summary>
/// <param name="userContext">The user context.</param>
/// <param name="taxon">Taxon object of the species fact.</param>
/// <param name="individualCategory">Individual category object of the species fact.</param>
/// <param name="factor">Factor object of the species fact.</param>
/// <param name="host">Host taxon object of the species fact.</param>
/// <param name="period">Period object of the species fact.</param>
/// <param name="speciesFacts">Species fact list to be expanded.</param>
private static void ExpandSpeciesFactListWithEmptySpeciesFact(
IUserContext userContext,
ITaxon taxon,
IIndividualCategory individualCategory,
IFactor factor,
ITaxon host,
IPeriod period,
SpeciesFactList speciesFacts)
{
if (!speciesFacts.Exists(CoreData.SpeciesFactManager.GetSpeciesFactIdentifier(
taxon,
individualCategory,
factor,
host,
period)))
{
speciesFacts.Add(CoreData.SpeciesFactManager.GetSpeciesFact(
userContext,
taxon,
individualCategory,
factor,
host,
period));
}
}
/// <summary>
/// Retrieves information about the specified taxon.
/// </summary>
/// <param name="taxonId">Id of the taxon.</param>
/// <returns>Information about the specified taxon.</returns>
public TaxonSpeciesFactViewModel GetTaxonSpeciesFact(int taxonId)
{
mTaxon = CoreData.TaxonManager.GetTaxon(mUserContext, taxonId);
mTaxonSpeciesFact = new TaxonSpeciesFactViewModel(mUserContext, mTaxon);
IIndividualCategory individualCategory = CoreData.FactorManager.GetDefaultIndividualCategory(mUserContext);
IPeriod period = CoreData.FactorManager.GetCurrentRedListPeriod(mUserContext);
PeriodList periods = CoreData.FactorManager.GetPublicPeriods(mUserContext);
IFactor categoryFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.RedlistCategory);
IFactor criteriaDocumentationFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.RedlistCriteriaDocumentation);
IFactor criteriaFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.RedlistCriteriaString);
IFactor globalCategoryFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.GlobalRedlistCategory);
//FactorList landscapeTypesFactors = LandscapeTypeCache.GetFactors(mUserContext);
//FactorList lifeFormFactors = LifeFormCache.GetFactors(mUserContext);
FactorList conventionFactors = CoreData.FactorManager.GetFactorTree(mUserContext, FactorId.Conventions).GetAllLeafFactors();
IFactor organismGroup1Factor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.Redlist_OrganismLabel1);
IFactor organismGroup2Factor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.Redlist_OrganismLabel2);
//FactorList countyOccurrenceFactors = CountyOccurrenceCache.GetFactors(mUserContext);
//FactorList biotopeFactors = BiotopeCache.GetFactors(mUserContext);
//FactorList substrateFactors = SubstrateCache.GetFactors(mUserContext);
//FactorList impactFactors = ImpactCache.GetFactors(mUserContext);
IFactor actionPlanFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.ActionPlan);
IFactor protectedByLawFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.ProtectedByLaw);
IFactor swedishOccurrenceFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SwedishOccurrence);
//FactorList hostFactors = HostCache.GetFactors(mUserContext);
// Get species facts.
var countyOccurrenceSpeciesFacts = new SpeciesFactList();
var landscapeTypeSpeciesFacts = new SpeciesFactList();
var biotopeSpeciesFacts = new SpeciesFactList();
var lifeFormSpeciesFacts = new SpeciesFactList();
var conventionSpeciesFacts = new SpeciesFactList();
var previouslyCategorySpeciesFact = new SpeciesFactList();
ISpeciesFact categorySpeciesFact = null;
ISpeciesFact criteriaDocumentationSpeciesFact = null;
ISpeciesFact criteriaSpeciesFact = null;
ISpeciesFact globalCategorySpeciesFact = null;
ISpeciesFact organismGroup1SpeciesFact = null;
ISpeciesFact organismGroup2SpeciesFact = null;
var substrateSpeciesFacts = new SpeciesFactList();
var impactSpeciesFacts = new SpeciesFactList();
ISpeciesFact actionPlanSpeciesFact = null;
ISpeciesFact protectedByLawSpeciesFact = null;
ISpeciesFact swedishOccurrenceSpeciesFact = null;
var hostSpeciesFacts = new SpeciesFactList();
ISpeciesFactSearchCriteria searchCriteria = new SpeciesFactSearchCriteria {
Factors = new FactorList()
};
searchCriteria.AddTaxon(mTaxon);
searchCriteria.Add(individualCategory);
foreach (IPeriod tempPeriod in periods)
{
searchCriteria.Add(tempPeriod);
}
// Add current period if not exist.
bool currentPeriodExist = periods.Any(tempPeriod => tempPeriod.Id == period.Id);
if (!currentPeriodExist)
{
searchCriteria.Add(period);
}
searchCriteria.Add(categoryFactor);
searchCriteria.Add(criteriaDocumentationFactor);
searchCriteria.Add(criteriaFactor);
searchCriteria.Add(globalCategoryFactor);
//searchCriteria.Factors.AddRange(landscapeTypesFactors);
//searchCriteria.Factors.AddRange(lifeFormFactors);
searchCriteria.Factors.AddRange(conventionFactors);
searchCriteria.Add(organismGroup1Factor);
searchCriteria.Add(organismGroup2Factor);
//searchCriteria.Factors.AddRange(countyOccurrenceFactors);
//searchCriteria.Factors.AddRange(biotopeFactors);
//searchCriteria.Factors.AddRange(substrateFactors);
//searchCriteria.Factors.AddRange(impactFactors);
searchCriteria.Add(actionPlanFactor);
searchCriteria.Add(protectedByLawFactor);
searchCriteria.Add(swedishOccurrenceFactor);
//searchCriteria.Factors.AddRange(hostFactors);
SpeciesFactList speciesFacts = CoreData.SpeciesFactManager.GetSpeciesFacts(mUserContext, searchCriteria);
// Split species facts into information groups.
if (speciesFacts.IsNotEmpty())
{
foreach (ISpeciesFact speciesFact in speciesFacts)
{
//if (countyOccurrenceFactors.Exists(speciesFact.Factor))
//{
// countyOccurrenceSpeciesFacts.Add(speciesFact);
//}
//else if (landscapeTypesFactors.Exists(speciesFact.Factor))
//{
// landscapeTypeSpeciesFacts.Add(speciesFact);
//}
//else if (biotopeFactors.Exists(speciesFact.Factor))
//{
// biotopeSpeciesFacts.Add(speciesFact);
//}
//else if (substrateFactors.Exists(speciesFact.Factor))
//{
// substrateSpeciesFacts.Add(speciesFact);
// if (hostFactors.Exists(speciesFact.Factor))
// {
// hostSpeciesFacts.Add(speciesFact);
// }
//}
//else if (impactFactors.Exists(speciesFact.Factor))
//{
// impactSpeciesFacts.Add(speciesFact);
//}
//else if (lifeFormFactors.Exists(speciesFact.Factor))
//{
// lifeFormSpeciesFacts.Add(speciesFact);
//}
if (conventionFactors.Exists(speciesFact.Factor))
{
conventionSpeciesFacts.Add(speciesFact);
}
else if (speciesFact.Factor.Id == (int)FactorId.RedlistCategory && speciesFact.Period.Id != period.Id)
{
previouslyCategorySpeciesFact.Add(speciesFact);
}
else
{
switch (speciesFact.Factor.Id)
{
case (int)FactorId.ActionPlan:
actionPlanSpeciesFact = speciesFact;
break;
case (int)FactorId.GlobalRedlistCategory:
globalCategorySpeciesFact = speciesFact;
break;
case (int)FactorId.ProtectedByLaw:
protectedByLawSpeciesFact = speciesFact;
break;
case (int)FactorId.RedlistCategory:
categorySpeciesFact = speciesFact;
break;
case (int)FactorId.RedlistCriteriaDocumentation:
criteriaDocumentationSpeciesFact = speciesFact;
break;
case (int)FactorId.RedlistCriteriaString:
criteriaSpeciesFact = speciesFact;
break;
case (int)FactorId.Redlist_OrganismLabel1:
organismGroup1SpeciesFact = speciesFact;
break;
case (int)FactorId.Redlist_OrganismLabel2:
organismGroup2SpeciesFact = speciesFact;
break;
case (int)FactorId.SwedishOccurrence:
swedishOccurrenceSpeciesFact = speciesFact;
break;
}
}
}
}
//mTaxonSpeciesFact.InitCountyOccurrenceInformation(countyOccurrenceSpeciesFacts);
//mTaxonSpeciesFact.InitLandscapeTypeInformation(landscapeTypeSpeciesFacts);
//mTaxonSpeciesFact.InitBiotopeInformation(biotopeSpeciesFacts);
//mTaxonSpeciesFact.InitLifeFormInformation(lifeFormSpeciesFacts);
//mTaxonSpeciesFact.InitConventionInformation(conventionSpeciesFacts);
InitRedListInformation(
mTaxonSpeciesFact,
categorySpeciesFact,
criteriaSpeciesFact,
criteriaDocumentationSpeciesFact,
globalCategorySpeciesFact,
period);
//mTaxonSpeciesFact.InitOrganismGroupInformation(organismGroup1SpeciesFact,
// organismGroup2SpeciesFact);
//mTaxonSpeciesFact.InitSubstrateInformation(substrateSpeciesFacts);
//mTaxonSpeciesFact.InitImpactInformation(impactSpeciesFacts);
//mTaxonSpeciesFact.InitActionPlanInformation(actionPlanSpeciesFact);
//mTaxonSpeciesFact.InitProtectedByLawInformation(protectedByLawSpeciesFact);
//mTaxonSpeciesFact.InitHostInformation(hostSpeciesFacts, mUserContext);
//mTaxonSpeciesFact.InitSwedishOccurrenceInformation(swedishOccurrenceSpeciesFact);
//mTaxonSpeciesFact.InitPreviouslyRedListedCategories(previouslyCategorySpeciesFact);
//GetSpeciesInformationDocument();
//long pictureId;
//mTaxonSpeciesFact.HasImage = !string.IsNullOrWhiteSpace(GetPictureByTaxon(mTaxon,
// AppSettings.Default.PictureXtraLargeHeight,
// AppSettings.Default.PictureXtraLargeWidth,
// AppSettings.Default.PictureLargeSize,
// true,
// string.Empty,
// out pictureId));
//mTaxonSpeciesFact.ImageMetaData = GetPictureMetadataByPictureId(pictureId);
//mTaxonSpeciesFact.HasCountyMap = GetCountyMap(mTaxon) != null;
//mTaxonSpeciesFact.HasObservationMap = SpeciesFilter.IsTaxaSpeciesOrBelow(mTaxon) &&
// SpeciesFactCacheManager.Instance.GetObservationMap(mTaxon.Id.ToString(CultureInfo.InvariantCulture)) != null;
mTaxonSpeciesFact.HasSpeciesFacts = HasSpeciesFacts(speciesFacts);
mTaxonSpeciesFact.IsValid = CheckIfTaxonValid();
//mTaxonSpeciesFact.Synonyms = mTaxon.GetSynonymsViewModel(mUserContext);
// Identify higher level taxa
//mTaxonSpeciesFact.CategoryNameHighLevel = SpeciesFilter.IsTaxaSpeciesOrBelow(mTaxon) ? "" : mTaxon.Category.Name + " - ";
//// Ignore if not higher taxa
//if ((mTaxonSpeciesFact.IsHigherTaxa = !SpeciesFilter.IsTaxaSpeciesOrBelow(mTaxon)) == false)
//{
// return mTaxonSpeciesFact;
//}
// Count all occurences for each category in underlying taxa
//var taxonNameSearchInformation = TaxonNameSearchManager.Instance.GetInformation(this.mTaxon.Id);
//foreach (var category in RedListedHelper.GetAllRedListCategories())
//{
// mTaxonSpeciesFact.RedListCategoryTaxa[category] = new List<int>();
//}
//foreach (var taxonInfoType in taxonNameSearchInformation.AllChildTaxaIdsInScope)
//{
// if (SpeciesFilter.IsTaxaSpeciesOrBelow(taxonInfoType.CategoryId, taxonInfoType.ParentCategoryId) && taxonInfoType.HasValidRedListCategory)
// {
// mTaxonSpeciesFact.RedListCategoryTaxa[taxonInfoType.RedListCategoryId].Add(taxonInfoType.TaxonId);
// }
//}
return(mTaxonSpeciesFact);
}
/// <summary>
/// Bind species fact to related member.
/// </summary>
private void SetParagraphSpeciesFacts()
{
SpeciesFactList speciesFacts;
if (_speciesFacts.IsNotEmpty())
{
speciesFacts = new SpeciesFactList();
foreach (ISpeciesFact speciesFact in _speciesFacts)
{
switch (speciesFact.Factor.Id)
{
case (Int32)FactorId.SpeciesInformationDocumentTaxonomicInformation:
speciesFacts.Add(speciesFact);
_taxonomicParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentDescription:
speciesFacts.Add(speciesFact);
_descriptionParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentDistribution:
speciesFacts.Add(speciesFact);
_distributionParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentEcology:
speciesFacts.Add(speciesFact);
_ecologyParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentThreats:
speciesFacts.Add(speciesFact);
_threatsParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentMeasures:
speciesFacts.Add(speciesFact);
_measuresParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentExtra:
speciesFacts.Add(speciesFact);
_extraParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentPreamble:
speciesFacts.Add(speciesFact);
_preambleParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentReferences:
speciesFacts.Add(speciesFact);
_referencesParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentAuthorAndYear:
speciesFacts.Add(speciesFact);
_authorParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentItalicsInReferences:
speciesFacts.Add(speciesFact);
_italicsInReferencesParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentItalicsInText:
speciesFacts.Add(speciesFact);
_italicsInTextParagraphSpeciesFact = speciesFact;
break;
case (Int32)FactorId.SpeciesInformationDocumentIsPublishable:
speciesFacts.Add(speciesFact);
_isPublishable = speciesFact;
break;
}
}
// Make sure that only species facts that belong
// to this SpeciesInformationDocument is handled.
_speciesFacts = speciesFacts;
}
}
