public void verify_default_constructor_sets_properties_correctly()
{
ITissueInput tissueInput;
// verify MultiLayerTissueInput
tissueInput = new MultiLayerTissueInput();
var viewModel = new MultiRegionTissueViewModel(tissueInput);
Assert.IsTrue(viewModel.RegionsVM != null);
var listOfTissueRegions = viewModel.RegionsVM;
Assert.IsTrue(((LayerRegionViewModel)listOfTissueRegions[1]).IsLayer);
// verify SingleEllipsoidTissueInput
tissueInput = new SingleEllipsoidTissueInput();
viewModel = new MultiRegionTissueViewModel(tissueInput);
Assert.IsTrue(viewModel.RegionsVM != null);
listOfTissueRegions = viewModel.RegionsVM;
Assert.IsTrue(((EllipsoidRegionViewModel)listOfTissueRegions[3]).IsEllipsoid);
// verify SingleVoxelTissueInput
tissueInput = new SingleVoxelTissueInput();
viewModel = new MultiRegionTissueViewModel(tissueInput);
Assert.IsTrue(viewModel.RegionsVM != null);
listOfTissueRegions = viewModel.RegionsVM;
Assert.IsTrue(((VoxelRegionViewModel)listOfTissueRegions[3]).IsVoxel);
}
private object GetTissueInputVM(string tissueType)
{
// ops to use as the basis for instantiating multi-region tissues based on homogeneous values (for differential comparison)
if (_currentHomogeneousOpticalProperties == null)
{
_currentHomogeneousOpticalProperties = new OpticalProperties(0.01, 1, 0.8, 1.4);
}
switch (tissueType)
{
case "SemiInfinite":
if (_currentSemiInfiniteTissueInput == null)
{
_currentSemiInfiniteTissueInput =
new SemiInfiniteTissueInput(
new SemiInfiniteTissueRegion(_currentHomogeneousOpticalProperties));
}
return(new OpticalPropertyViewModel(
_currentSemiInfiniteTissueInput.Regions.First().RegionOP,
IndependentVariableAxisUnits.InverseMM.GetInternationalizedString(),
StringLookup.GetLocalizedString("Heading_OpticalProperties")));
case "MultiLayer":
if (_currentMultiLayerTissueInput == null)
{
_currentMultiLayerTissueInput = new MultiLayerTissueInput(new ITissueRegion[]
{
new LayerTissueRegion(new DoubleRange(0, 2), _currentHomogeneousOpticalProperties.Clone()),
new LayerTissueRegion(new DoubleRange(2, double.PositiveInfinity),
_currentHomogeneousOpticalProperties.Clone())
});
}
return(new MultiRegionTissueViewModel(_currentMultiLayerTissueInput));
case "SingleEllipsoid":
if (_currentSingleEllipsoidTissueInput == null)
{
_currentSingleEllipsoidTissueInput = new SingleEllipsoidTissueInput(
new EllipsoidTissueRegion(new Position(0, 0, 10), 5, 5, 5,
new OpticalProperties(0.05, 1.0, 0.8, 1.4)),
new ITissueRegion[]
{
new LayerTissueRegion(new DoubleRange(0, double.PositiveInfinity),
_currentHomogeneousOpticalProperties.Clone())
});
}
return(new MultiRegionTissueViewModel(_currentSingleEllipsoidTissueInput));
default:
throw new ArgumentOutOfRangeException(nameof(tissueType));
}
}
public void validate_deserialized_class_is_correct()
{
var i = new SingleEllipsoidTissueInput(new EllipsoidTissueRegion(new Position(0, 0, 1), 0.5, 0.5, 0.5,
new OpticalProperties(0.05, 1.0, 0.8, 1.4)), new ITissueRegion[]
{
new LayerTissueRegion(
new DoubleRange(double.NegativeInfinity, 0.0),
new OpticalProperties(0.0, 1e-10, 1.0, 1.0)),
new LayerTissueRegion(
new DoubleRange(0.0, 100.0),
new OpticalProperties(0.01, 1.0, 0.8, 1.4)),
new LayerTissueRegion(
new DoubleRange(100.0, double.PositiveInfinity),
new OpticalProperties(0.0, 1e-10, 1.0, 1.0))
}
);
var iCloned = i.Clone();
Assert.AreEqual(iCloned.Regions[1].RegionOP.Mua, i.Regions[1].RegionOP.Mua);
}
public void validate_deserialized_class_is_correct_when_using_FileIO()
{
var i = new SingleEllipsoidTissueInput(new EllipsoidTissueRegion(new Position(0, 0, 1), 0.5, 0.5, 0.5,
new OpticalProperties(0.05, 1.0, 0.8, 1.4)), new ITissueRegion[]
{
new LayerTissueRegion(
new DoubleRange(double.NegativeInfinity, 0.0),
new OpticalProperties(0.0, 1e-10, 1.0, 1.0)),
new LayerTissueRegion(
new DoubleRange(0.0, 100.0),
new OpticalProperties(0.01, 1.0, 0.8, 1.4)),
new LayerTissueRegion(
new DoubleRange(100.0, double.PositiveInfinity),
new OpticalProperties(0.0, 1e-10, 1.0, 1.0))
}
);
i.WriteToJson("SingleEllipsoidTissue.txt");
var iCloned = FileIO.ReadFromJson <SingleEllipsoidTissueInput>("SingleEllipsoidTissue.txt");
Assert.AreEqual(iCloned.Regions[1].RegionOP.Mua, i.Regions[1].RegionOP.Mua);
}